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EBI Dbfetch
ID AY081353; SV 1; linear; mRNA; STD; PLN; 1993 BP.
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AC AY081353;
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DT 25-MAR-2002 (Rel. 71, Created)
DT 16-APR-2005 (Rel. 83, Last updated, Version 2)
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DE Arabidopsis thaliana mannosyl-oligosaccharide 1,2-alpha-mannosidase,
DE putative (At1g51590) mRNA, complete cds.
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KW FLI_CDNA.
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OS Arabidopsis thaliana (thale cress)
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC eurosids II; Brassicales; Brassicaceae; Arabidopsis.
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RN [1]
RP 1-1993
RA Nguyen M., Karlin-Neumann G., Southwick A., Lam B., Miranda M., Palm C.J.,
RA Bowser L., Jones T., Banh J., Carninci P., Chen H., Cheuk R., Chung M.K.,
RA Hayashizaki Y., Ishida J., Kamiya A., Kawai J., Kim C., Lin J., Liu S.X.,
RA Narusaka M., Pham P.K., Sakano H., Sakurai T., Satou M., Seki M., Shinn P.,
RA Yamada K., Shinozaki K., Ecker J., Theologis A., Davis R.W.;
RT ;
RL Submitted (26-FEB-2002) to the EMBL/GenBank/DDBJ databases.
RL DNA Sequencing and Technology Center, Stanford University, 855 California
RL Avenue, Palo Alto, CA 94304, USA
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CC e-mail for correspondence: arab@sequence.stanford.edu
CC RIKEN Genomic Sciences Center (GSC) members carried out the
CC collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN
CC Arabidopsis Full-Length cDNA'): Seki,M., Narusaka,M., Ishida,J.,
CC Satou,M., Kamiya,A., Sakurai,T., Carninci,P., Kawai,J.,
CC Hayashizaki,Y. and Shinozaki,K.
CC The Salk, Stanford, PGEC (SSP) Consortium members carried out the
CC sequencing and annotation of the RAFL cDNAs: Nguyen,M.,
CC Southwick,A., Karlin-Neumann,G., Lam,B., Miranda,M., Palm,C.J.,
CC Bowser,L., Jones,T., Banh,J., Chen,H., Cheuk,R., Chung,M.K.,
CC Kim,C., Lin,J., Liu,S.X., Pham,P.K., Sakano,H., Shinn,P.,
CC Yamada,K., Ecker,J., Theologis,A. and Davis,R.W.
CC Nguyen,M, (SSP/Stanford) and Seki,M. (RIKEN GSC) contributed
CC equally to this work. Shinozaki,K. (RIKEN GSC) and Davis,R.W.
CC (SSP/Stanford) contributed equally to this work as PIs.
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FH Key Location/Qualifiers
FH
FT source 1..1993
FT /organism="Arabidopsis thaliana"
FT /chromosome="1"
FT /mol_type="mRNA"
FT /clone="RAFL09-65-C03 (R24808)"
FT /note="This clone is in pBluescript ecotype: Columbia"
FT /db_xref="taxon:3702"
FT CDS 174..1856
FT /codon_start=1
FT /gene="At1g51590"
FT /product="mannosyl-oligosaccharide 1,2-alpha-mannosidase,
FT putative"
FT /db_xref="GOA:Q9C512"
FT /db_xref="HSSP:1FO3"
FT /db_xref="InterPro:IPR001382"
FT /db_xref="UniProtKB/TrEMBL:Q9C512"
FT /protein_id="AAL91242.1"
FT /translation="MARSRSISGYGIWKYLNPAYYLRRPRRLALLFIVFVSVSMLVWDR
FT INLAREHEVEVFKLNEEVSRLEQMLEELNGGVGNKPLKTLKDAPEDPVDKQRRQKVKEA
FT MIHAWSSYEKYAWGKDELQPRTKDGTDSFGGLGATMVDSLDTLYIMGLDEQFQKAREWV
FT ASSLDFDKDYDASMFETTIRVVGGLLSAYDLSGDKMFLEKAKDIADRLLPAWNTPTGIP
FT YNIINLRNGNAHNPSWAAGGDSILADSGTEQLEFIALSQRTGDPKYQQKVEKVITELNK
FT NFPADGLLPIYINPDNANPSYSTTTFGAMGDSFYEYLLKVWVQGNKTSAVKPYRDMWEK
FT SMKGLLSLVKKSTPSSFTYICEKNGNNLIDKMDELACFAPGMLALGASGYGPDEEKKFL
FT SLAGELAWTCYNFYQSTPTKLAGENYFFTAGQDMSVGTSWNILRPETVESLFYLWRLTG
FT NKTYQEWGWNIFQAFEKNSRVESGYVGLKDVNTGAKDNKMQSFFLAETLKYLYLLFSPS
FT SVISLDEWVFNTEAHPLKIVARNDPRKPTIALRQRKFGHQINV"
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SQ Sequence 1993 BP; 580 A; 347 C; 465 G; 601 T; 0 other;
aactactaaa atcggatcta taacttttgt tctttgagag acttatttct ctctcggttt 60
cttactcttt tcggatcaga aatttaaaag cttttaactt ttgtcttgct ctgtttcatg 120
gacactgatt tctcaattgg tctctgtttt tgttgagtgg gttgagaaga gagatggcga 180
gaagtagatc gattagtggt tatgggatat ggaaatattt gaatcctgcg tattatctta 240
gaagaccgag acgtttggct ttgcttttca ttgtcttcgt ctctgtttct atgcttgtct 300
gggatcgtat taatcttgcc cgagaacatg aggttgaagt ttttaagcta aatgaagaag 360
tttcacggtt ggagcagatg ttagaagagc ttaatggtgg tgttggcaat aagcctttga 420
agactctgaa ggatgcccca gaagatccag ttgataaaca gcgaaggcag aaagtaaaag 480
aggcaatgat ccatgcttgg agctcttatg aaaagtatgc atgggggaaa gatgagcttc 540
agcctcggac aaaagatggc actgatagct ttggtggcct tggagcaact atggtagatt 600
ctttagatac actctatata atgggtctag atgagcagtt tcaaaaagcc agagagtggg 660
ttgcaagctc attggatttc gacaaggatt atgacgccag tatgtttgag acaaccataa 720
gagttgtagg cggacttctt agtgcgtatg atctttctgg ggacaaaatg ttccttgaaa 780
aggctaagga tattgcagac agattattgc ctgcatggaa tactccaacg ggtatacctt 840
acaatattat caacttgaga aatggaaatg ctcacaatcc ttcatgggcg gcagggggag 900
acagtattct cgcagactcc ggcactgagc agctcgagtt tattgccctt tcccaaagga 960
caggggaccc aaaatatcag cagaaggtag agaaggttat tacagaactg aataagaact 1020
ttcctgctga tggtttactt cccatctata taaatccgga taatgctaat ccatcgtact 1080
ctaccacaac atttggtgcc atgggagata gcttttatga gtatttgctc aaagtttggg 1140
tgcaagggaa caaaacatct gccgtgaaac cctatagaga tatgtgggag aaatcaatga 1200
aaggtttgtt aagcttggtc aagaaatcaa caccttcatc atttacgtat atatgtgaga 1260
agaacggaaa taatttgatt gataagatgg atgaattggc gtgctttgct cctggaatgt 1320
tggctttagg agcttcaggt tatggccctg atgaagaaaa aaagtttctt tcacttgctg 1380
gagagcttgc ctggacttgt tataactttt accaatcgac accaacgaaa cttgctggag 1440
agaactattt cttcactgca gggcaggaca tgagtgttgg cacatcttgg aacattttaa 1500
gaccagaaac cgttgaatca ctgttttacc tctggcgatt aactgggaac aagacatatc 1560
aagagtgggg atggaatata tttcaagcat ttgagaagaa ctctcgcgta gaatctggat 1620
atgtaggctt gaaggatgtc aatacaggtg ctaaagacaa caagatgcaa agcttcttct 1680
tagctgagac tcttaagtat ctatatcttc tcttttcgcc ttcatctgtt atttcattag 1740
acgagtgggt tttcaacaca gaagcccatc cgcttaagat tgtggcacgg aatgatccgc 1800
gtaagccaac tatagcacta cgccagagga agtttggtca tcagattaac gtttagtaga 1860
cagtttctgc tcaaatggaa tttgatatta ttatatatta ccacaaagtt tgaggcacat 1920
tgttgtatca gtttaaagaa cagatggaca acgtttttgc cacagcaatt tgtagaggta 1980
ctttactgtt tcc 1993
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