EBI Dbfetch
ID AF456131; SV 1; linear; genomic DNA; STD; PRO; 2804 BP.
XX
AC AF456131;
XX
DT 24-JAN-2002 (Rel. 70, Created)
DT 18-DEC-2003 (Rel. 78, Last updated, Version 2)
XX
DE Bacillus subtilis isolate RO-PP-2 quorum-sensing gene locus, partial
DE sequence.
XX
KW .
XX
OS Bacillus subtilis
OC Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus.
XX
RN [1]
RP 1-2804
RX DOI; 10.1046/j.1365-2958.2002.02977.x.
RX PUBMED; 12067344.
RA Ansaldi M., Marolt D., Stebe T., Mandic-Mulec I., Dubnau D.;
RT "Specific activation of the Bacillus quorum-sensing systems by
RT isoprenylated pheromone variants";
RL Mol. Microbiol. 44(6):1561-1573(2002).
XX
RN [2]
RP 1-2804
RA Ansaldi M., Marolt D., Stebe T., Mandic-Mulec I., Dubnau D.;
RT ;
RL Submitted (07-DEC-2001) to the EMBL/GenBank/DDBJ databases.
RL Public Health Research Institute, 455 First Avenue, New York, NY 10016, USA
XX
FH Key Location/Qualifiers
FH
FT source 1..2804
FT /organism="Bacillus subtilis"
FT /isolate="RO-PP-2"
FT /mol_type="genomic DNA"
FT /note="group: 168"
FT /db_xref="taxon:1423"
FT gene 32..871
FT /gene="comQ"
FT CDS 32..871
FT /codon_start=1
FT /transl_table=11
FT /gene="comQ"
FT /product="pre-ComX modifying enzyme"
FT /note="ComQ"
FT /db_xref="GOA:Q8VLM0"
FT /db_xref="InterPro:IPR008949"
FT /db_xref="InterPro:IPR017446"
FT /db_xref="UniProtKB/TrEMBL:Q8VLM0"
FT /protein_id="AAL67718.1"
FT /translation="MKEIVHEKIQNLDLKEYLINFIDEKNHFSFGILSFKHYVALSGNR
FT SSHILTLAGGIELLILAFDIFDDLEDEDNIEIKWMKIDPSLALNAATTLYTLGLETICS
FT ISNSAEFHRLTLKYALNAMQGQHEDLRNSPETEEECIQMMKQKAGSLTAMSAVLAAMLA
FT NGEFNQTIEDYAYKIGIIKQLENDYYGLVNDQRSDIRKKRKTLIYLFLNRKFNEASEKI
FT LKLINSHTSYHSFISDSSKFDELLFEAGLNQYVSMLIKLYEEEITASMNQLNINIKL"
FT gene 886..1062
FT /gene="comX"
FT CDS 886..1062
FT /codon_start=1
FT /transl_table=11
FT /gene="comX"
FT /product="ComX pheromone precursor"
FT /note="pre-ComX"
FT /db_xref="GOA:Q8VL79"
FT /db_xref="InterPro:IPR009233"
FT /db_xref="UniProtKB/Swiss-Prot:Q8VL79"
FT /protein_id="AAL67719.1"
FT /translation="MKQDMIDYLMKNPQVLTKLENGEASLIGIPDKLIPSIVDIFNKKM
FT TLSKKCKGIFWEQ"
FT gene 1082..>2804
FT /gene="comP"
FT CDS 1082..>2804
FT /codon_start=1
FT /transl_table=11
FT /gene="comP"
FT /product="histidine kinase sensor protein"
FT /note="ComP"
FT /db_xref="GOA:Q8VQF1"
FT /db_xref="UniProtKB/TrEMBL:Q8VQF1"
FT /protein_id="AAL67720.1"
FT /translation="MKNLKRNFSIVLVLFSLLYFAYIVYFTQNGILVGTYVSETANHEL
FT KVEKMTKATYGKYMGLKEGDLILEVSGKKPTSENIKRKYLAKAEHLKVKRDNHEIQLHN
FT TEYISLNNSYSFFIYIIPCIFFALSLLCAFYIYRVNRVKNTYSAYILINFLLFISIAYL
FT SAGGVTRGYEINRYINLFTFLNVPVLYLHFLYQYFKELSIKFSSRYIVNILYTLPIINV
FT IIEFIQKYLPSGIITNISNINLVTFLIEITVVYFCIIYYGIIYRKKDHYYLLKVLLISN
FT TVAFFPFTVLYIMPEVLFGQYIYSAIVTAPFLIIIPLALVYQFVVNKIYDIDFILGRIR
FT YYSLLSIIPTIGIVWLSIIFDSKRADFNIILITLCTFIIFLSVFYIKELLDYKFRLKRF
FT SEKYNYQDSIFKYTQLIKGVSALDQVFKNLKTTILEVLPVSKAYIFEVGADREIIYFDK
FT QSVEPNWRLYKTEFEKVTKEIGKIIEINQGFLIKVGEKGTSSYVLLCLSSINTPRLTRD
FT EISWLKTLSFYTSVSMENVVQIEELMDHLQALKREDANPVWLKKLMYTIEEKQRSDL"
XX
SQ Sequence 2804 BP; 1009 A; 358 C; 473 G; 964 T; 0 other;
gtgtttagat gaaatgtcaa ttaaaaaaaa gatgaaggag attgtacacg aaaaaattca 60
gaatttggat ttgaaagagt atttaatcaa ctttatcgat gagaaaaatc acttttcttt 120
tggtatcctt tcttttaagc attacgtagc attaagcggt aatcgttctt cgcatatttt 180
aacattggca ggaggaatag aacttttaat cttagccttc gatatatttg atgatttaga 240
ggatgaggac aacattgaaa taaaatggat gaaaattgat ccttctctcg ctctaaatgc 300
tgcaactacc ctttatactt tagggttaga aactatttgt tctattagca atagcgctga 360
atttcatcgg ctaactttaa aatatgcatt aaatgctatg cagggacaac atgaggattt 420
aaggaactct cctgagacgg aagaagaatg tattcaaatg atgaaacaaa aagcaggttc 480
tcttacagct atgtctgccg ttttagctgc tatgcttgcg aatggagagt ttaatcaaac 540
tattgaggat tatgcttata agatagggat aataaaacaa ttggaaaatg actattatgg 600
tttagttaat gatcaacgta gtgatataag aaaaaaaaga aagactttga tttatttatt 660
tttaaaccgc aaatttaatg aggcttctga aaagatatta aaattaataa attctcatac 720
tagttatcat agttttatat ctgatagctc taaatttgat gaattattat ttgaagcggg 780
gcttaatcaa tatgtatcta tgctgattaa gctttatgag gaagaaatca cagcaagcat 840
gaatcaatta aatataaata taaagttata aagaggggta tacttatgaa acaagacatg 900
attgattact taatgaagaa tccgcaagtt ttaactaaat tagaaaatgg agaggcgagc 960
ttaataggaa ttccagataa actaatccct tcaattgtag atattttcaa caaaaaaatg 1020
actctttcaa agaaatgcaa gggaattttc tgggagcaat aattcagaga gaagtggtct 1080
attgaaaaac cttaaaagaa atttttctat agtgctagta ttatttagtc tcttatattt 1140
tgcttatatt gtttatttca ctcagaatgg tatcttagtt ggtacttatg tttctgaaac 1200
agccaatcat gagttaaaag ttgaaaaaat gactaaagcc acatatggaa aatatatggg 1260
cttaaaagaa ggcgacttaa tactcgaggt aagtgggaag aaacctacaa gtgagaatat 1320
taaaagaaag tatttagcaa aagctgaaca tttaaaagtt aaaagggata atcatgaaat 1380
tcaattacat aatacggagt atatctcttt aaataattct tatagctttt tcatttatat 1440
tatcccttgt atattttttg ctttgagtct gttatgtgca ttttatattt atagggtcaa 1500
tcgagtaaaa aatacgtact cggcttatat tttgattaat tttttgctgt ttatatctat 1560
agcatattta agtgctggag gcgtaactag agggtatgaa ataaatagat atattaatct 1620
ttttaccttt ttaaatgtac ctgtcttgta tttgcatttt ctatatcaat atttcaaaga 1680
attaagcatc aaattttcat cacgttatat cgtgaatatt ttatacacgt tgccaattat 1740
caatgtaata atagaattca tccagaaata ccttccttcg gggattatta cgaatattag 1800
taatattaat ttagtaacat tcttaataga gattacagtt gtttattttt gcattatcta 1860
ttatgggata atttatagaa aaaaggatca ttattatttg ttgaaggtat tattgatttc 1920
aaatacggta gctttctttc cttttacggt cttatatatc atgccggaag ttttatttgg 1980
gcaatatatt tactcagcaa tagtgactgc gccattctta ataattatcc cattagcatt 2040
ggtttatcaa ttcgttgtaa ataaaattta tgatatagac tttatactag gcagaattag 2100
atattatagt ttattatcca tcataccaac aataggcata gtatggttgt caataatatt 2160
tgatagcaaa agagcggatt ttaatatcat cttaattacg ttatgtacgt tcataatttt 2220
tctgtcggtc ttttatatta aagaattact ggactataaa tttcggttaa aacgattttc 2280
ggaaaaatat aattatcaag acagtatatt taaatatacg caattaatta aaggtgtatc 2340
agctttagat caagtattta agaacttaaa aacaacaata ctagaagttc tacccgtaag 2400
taaagcctac atctttgaag ttggtgctga tagagaaatc atatactttg ataaacagag 2460
tgttgaaccc aactggaggc tatataaaac agaatttgaa aaggtcacta aagaaatagg 2520
gaagattatt gagattaacc aaggcttttt gatcaaagta ggggaaaaag gtacgagttc 2580
ttatgtattg ctttgtttat ctagcatcaa tacaccaagg ttgacaagag atgaaatttc 2640
atggctgaaa acattatcgt tttatactag tgtatccatg gaaaatgttg tacaaattga 2700
agaactcatg gatcatttac aagctttaaa aagggaagat gctaaccccg tatggctcaa 2760
aaaactcatg tacacgatcg aagaaaaaca acgctctgat ctcg 2804
//
 |