EBI Dbfetch

ID   AY055462; SV 1; linear; mRNA; STD; VRT; 2326 BP.
XX
AC   AY055462;
XX
DT   15-FEB-2002 (Rel. 70, Created)
DT   21-OCT-2008 (Rel. 97, Last updated, Version 3)
XX
DE   Danio rerio N-glycan alpha 2,8-sialyltransferase mRNA, complete cds.
XX
KW   .
XX
OS   Danio rerio (zebrafish)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC   Cyprinidae; Danio.
XX
RN   [1]
RP   1-2326
RX   DOI; 10.1016/j.ydbio.2007.03.032.
RX   PUBMED; 17462622.
RA   Marx M., Rivera-Milla E., Stummeyer K., Gerardy-Schahn R., Bastmeyer M.;
RT   "Divergent evolution of the vertebrate polysialyltransferase Stx and Pst
RT   genes revealed by fish-to-mammal comparison";
RL   Dev. Biol. 306(2):560-571(2007).
XX
RN   [2]
RP   1-2326
RA   Marx M., Malaga-Trillo E.;
RT   ;
RL   Submitted (10-SEP-2001) to the EMBL/GenBank/DDBJ databases.
RL   Biology, University of Konstanz, Universitaetsstrasse 10, Konstanz 78457,
RL   Germany
XX
DR   Ensembl-Gn; ENSDARG00000005972; Danio_rerio.
DR   Ensembl-Gn; ENSDARG00000013871; Danio_rerio.
DR   Ensembl-Gn; ENSDARG00000018788; Danio_rerio.
DR   Ensembl-Gn; ENSDARG00000038237; Danio_rerio.
DR   Ensembl-Gn; ENSDARG00000039534; Danio_rerio.
DR   Ensembl-Gn; ENSDARG00000074804; Danio_rerio.
DR   Ensembl-Tr; ENSDART00000013082; Danio_rerio.
DR   Ensembl-Tr; ENSDART00000019818; Danio_rerio.
DR   Ensembl-Tr; ENSDART00000039955; Danio_rerio.
DR   Ensembl-Tr; ENSDART00000055756; Danio_rerio.
DR   Ensembl-Tr; ENSDART00000057761; Danio_rerio.
DR   Ensembl-Tr; ENSDART00000110499; Danio_rerio.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2326
FT                   /organism="Danio rerio"
FT                   /strain="Konstanz"
FT                   /mol_type="mRNA"
FT                   /dev_stage="embryonic 50 hpf"
FT                   /db_xref="taxon:7955"
FT   CDS             617..1762
FT                   /codon_start=1
FT                   /product="N-glycan alpha 2,8-sialyltransferase"
FT                   /note="STX"
FT                   /db_xref="GOA:Q8QH83"
FT                   /db_xref="InterPro:IPR001675"
FT                   /db_xref="InterPro:IPR012163"
FT                   /db_xref="UniProtKB/TrEMBL:Q8QH83"
FT                   /db_xref="ZFIN:ZDB-GENE-020919-4"
FT                   /protein_id="AAL17875.1"
FT                   /translation="MSFEFRILMFGIGTALVIFVIIADISEVEEEIANIEDSRKFHLKS
FT                   VALQSNRSSDLNAAPTSLVTYRKSKVSSLASPSDIKRKTSNSSSSEWTFNRTLSNLIRK
FT                   NILKFLDAERDISILKSTFKPGDVIHYIFDRQSTTNISENLYHLLPTVSPMKNQHYRKC
FT                   AIVGNSGILLNSSCGREIDSHDFVIRCNLAPVEEYAADVGLRTSLVTMNPSVVQRAFQD
FT                   LNSEEWVQRFVQRPQSLSGSVLWIPAFMAKGGEERVEWAIRLILLHTVNVRTAFPSLRL
FT                   LHAVRGYWLTNHVQIKRPTTGLLMYTMATRFCDEIHLYGFWPFAHDPDGKPVKYHYYDT
FT                   LTYHYTSSASPHTMPLEFRTLSALHRQGALRLHTGPCKPPT"
XX
SQ   Sequence 2326 BP; 676 A; 512 C; 499 G; 639 T; 0 other;
     attttcggac agacaaatga catgtcgctg taactctgtc gcatcgctcg cacctggatt        60
     tgggattaca tgtttgaaga aaaataatgt taggtttcat ttcaaacatt atgcttcagt       120
     gttaaaacaa tagaaagtcc tcaaccgtaa aaaaccaaac gtgtgcgtct ttgtcaaaca       180
     gcaacaaaga gaccaaggcg gagagaggat agcccacatc ttcaatttta aacccacgcc       240
     ttgtgtctgt gtataccaat aacgcagttt gcttttcaca taggctatga gtttatgcac       300
     cttgcaggca aagtttcaag ggaactgcct ggcttgcaat ctatgtagta gcggcaggag       360
     gagtagaaga gaagaaagga cgtgcacgtt tgtctcacct ctctactact ttggtgaagg       420
     tggaagaagc ggacagacgc gataataatg cagacaactg ttcgttaacc tgcacggaca       480
     tggtccagct ttgtcgagga gccggaggag cattacatgt gttgccctgc gttaggaacc       540
     agcgtgaaag aggagaacac atttctattg cgctttatag ttcaacgcat ttgtagaatc       600
     gcgcatcggt caagtcatgt cttttgaatt ccgaatactg atgtttggaa tcgggacagc       660
     gctggttata tttgtgatta tagctgatat atcggaagtg gaggaagaaa tcgcgaacat       720
     tgaggattca cggaaattcc acttaaaaag tgtcgccctt cagtccaaca gaagttcaga       780
     tctgaatgct gcccctactt ctctagtcac atatagaaag agcaaagtct cctctctagc       840
     ttcaccgtct gacataaagc gcaaaaccag caattcatcc tcatctgaat ggactttcaa       900
     cagaaccttg tctaacctca tcaggaaaaa cattttgaaa ttcctggatg ctgagaggga       960
     catctcaatt ctgaagagca cctttaaacc tggtgatgta attcattata tatttgaccg      1020
     tcagagcacc acaaacatct cagagaatct gtaccacctt ttaccaactg tgtcgcccat      1080
     gaagaatcag cattacagaa agtgtgccat cgtagggaac tctggcatac tactgaacag      1140
     cagctgcggc agagagattg actcgcacga ctttgttatt aggtgtaact tggctccggt      1200
     ggaggagtat gctgctgacg tgggcctgcg caccagcctg gtgactatga acccctcagt      1260
     ggtgcagcgt gcctttcagg acctgaacag cgaagagtgg gtgcagcgtt tcgtccagcg      1320
     gccgcaaagc cttagtggga gtgtgttgtg gattcctgcc tttatggcta aaggaggaga      1380
     ggagcgagtg gagtgggcca ttcgtctcat tctcctgcat acggtgaacg tccgcaccgc      1440
     cttcccctct ctgcgtctgc tccatgctgt cagaggttac tggctgacca accatgtcca      1500
     gatcaaacgt cccaccactg gactgctaat gtacaccatg gctactcgct tttgtgatga      1560
     gatccacctg tatggcttct ggcccttcgc tcacgaccct gacggcaaac cagtcaagta      1620
     tcactactat gatacactaa cttaccacta cacatctagt gccagtccac acacaatgcc      1680
     tctggagttt aggaccttaa gtgctcttca cagacagggg gcgctgcggc tgcacacggg      1740
     accatgcaaa cctcctacat gaattcttta aacactggac cttacacaca cacaaaggaa      1800
     ggaaatgctg tgaaaaagtc tggaacaact gaatatttca ggtaaatctt tgaccataag      1860
     tgagaacgca atatatgaag aggggatgtt ttttccaaag tgttcaattt taaaaaggtt      1920
     tttaatcccc catgctgttt gataagaagc ccctttccgg tgttagtttt tttttcatat      1980
     catttgtttt ttacatcatt cattaagtgt cttagtttat taaatgccaa atatggccac      2040
     tagatggaag caaatcgtag aggagaaaat acagggtttc tgcaggtttc ataaaaaaga      2100
     ctttaggact aattcgaaac atgatgaatg tcatttcatt tttttttatt tcaaagacct      2160
     aaatcacaaa tattgatttt gttttcttgt catactgtta ctgtaaactt tattgtcacc      2220
     ttttaggaga atttttttct gcagcatact agatttacaa cacatatatc acaccacaca      2280
     cttaagataa acattaaaca acattaatag tacaaaaaaa aaaaaa                     2326
//