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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AY040678; SV 1; linear; genomic DNA; STD; PRO; 537 BP.
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AC   AY040678;
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DT   10-JUL-2001 (Rel. 68, Created)
DT   29-OCT-2002 (Rel. 73, Last updated, Version 2)
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DE   Leptospira interrogans peptide deformylase (pdf) gene, complete cds.
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KW   .
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OS   Leptospira interrogans
OC   Bacteria; Spirochaetes; Spirochaetales; Leptospiraceae; Leptospira.
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RN   [1]
RP   1-537
RX   DOI; 10.1107/S0907444902003736.
RX   PUBMED; 11976499.
RA   Li Y., Ren S., Gong W.;
RT   "Cloning, high-level expression, purification and crystallization of
RT   peptide deformylase from Leptospira interrogans";
RL   Acta Crystallogr. D Biol. Crystallogr. 58(Pt 5):846-848(2002).
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RN   [2]
RP   1-537
RA   Ren S., Li Y., Gong W.;
RT   ;
RL   Submitted (17-JUN-2001) to the EMBL/GenBank/DDBJ databases.
RL   The School of Life Science, University of Science & Technology of China,
RL   Jinzhai Road 96, Hefei, Anhui 230027, P.R. China
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FH   Key             Location/Qualifiers
FH
FT   source          1..537
FT                   /organism="Leptospira interrogans"
FT                   /strain="Lai"
FT                   /mol_type="genomic DNA"
FT                   /serovar="icterohaemorrhagiae"
FT                   /db_xref="taxon:173"
FT   CDS             1..537
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="pdf"
FT                   /product="peptide deformylase"
FT                   /note="PDF; involved in the modification of the first
FT                   incorporated methionine in prokaryotes"
FT                   /db_xref="GOA:Q93LE9"
FT                   /db_xref="InterPro:IPR000181"
FT                   /db_xref="PDB:1SV2"
FT                   /db_xref="PDB:1SZZ"
FT                   /db_xref="PDB:1VEV"
FT                   /db_xref="PDB:1VEY"
FT                   /db_xref="PDB:1VEZ"
FT                   /db_xref="PDB:1Y6H"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q93LE9"
FT                   /protein_id="AAK70806.1"
FT                   /translation="MSVRKILRMGDPILRKISEPVTEDEIQTKEFKKLIRDMFDTMRHA
FT                   EGVGLAAPQIGILKQIVVVGSEDNERYPGTPDVPERIILNPVITPLTKDTSGFWEGCLS
FT                   VPGMRGYVERPNQIRMQWMDEKGNQFDETIDGYKAIVYQHECDHLQGILYVDRLKDTKL
FT                   FGFNETLDSSHNVLD"
XX
SQ   Sequence 537 BP; 190 A; 109 C; 109 G; 129 T; 0 other;
     atgtcagtca gaaaaatttt aagaatggga gatccaattc tccgtaaaat ctcagagcca        60
     gttacagaag acgaaattca aactaaagaa ttcaaaaagt taatccgaga tatgttcgat       120
     acaatgcgac acgcggaagg agtgggactt gcggctcctc agatcggaat tttgaaacaa       180
     atcgtagtcg ttggttccga agataatgaa cgttacccag gaaccccaga cgttccagag       240
     agaatcattt taaatccagt aattacacct cttacaaaag atacttccgg tttttgggaa       300
     ggttgccttt ccgtcccagg aatgcgcggt tatgtggaaa gacccaacca aatcagaatg       360
     caatggatgg acgaaaaagg aaaccaattt gacgaaacca tagacggcta taaagcaatc       420
     gtctatcaac atgaatgtga tcacctacag ggaattttat acgtagatag actaaaagac       480
     actaagttat tcggttttaa cgaaacccta gactcttctc acaacgtcct agactaa          537
//
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