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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   AF370534; SV 1; linear; mRNA; STD; PLN; 1194 BP.
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AC   AF370534;
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DT   02-MAY-2001 (Rel. 67, Created)
DT   02-MAY-2001 (Rel. 67, Last updated, Version 1)
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DE   Arabidopsis thaliana Putative L-ascorbate peroxidase (AT4g09010) mRNA,
DE   complete cds.
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KW   FLI_CDNA.
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OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
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RN   [1]
RP   1-1194
RA   Nguyen M., Karlin-Neumann G., Southwick A., Lam B., Miranda M., Palm C.J.,
RA   Bowser L., Jones T., Banh J., Carninci P., Chen H., Cheuk R., Chung M.K.,
RA   Hayashizaki Y., Ishida J., Kamiya A., Kawai J., Kim C., Lin J., Liu S.X.,
RA   Narusaka M., Pham P.K., Sakano H., Sakurai T., Satou M., Seki M., Shinn P.,
RA   Yamada K., Shinozaki K., Ecker J., Theologis A., Davis R.W.;
RT   ;
RL   Submitted (17-APR-2001) to the EMBL/GenBank/DDBJ databases.
RL   DNA Sequencing and Technology Center, Stanford University, 855 California
RL   Avenue, Palo Alto, CA 94304, USA
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CC   e-mail for correspondence: arab@sequence.stanford.edu
CC   RIKEN Genomic Sciences Center (GSC) members carried out the
CC   collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN
CC   Arabidopsis  Full-Length cDNA'): Seki,M., Narusaka,M., Ishida,J.,
CC   Satou,M., Kamiya,A., Sakurai,T., Carninci,P., Kawai,J.,
CC   Hayashizaki,Y. and Shinozaki,K.
CC   The Salk, Stanford, PGEC (SSP) Consortium members carried out the
CC   sequencing and annotation of the RAFL cDNAs: Nguyen,M.,
CC   Southwick,A., Karlin-Neumann,G.,  Lam,B., Miranda,M., Palm,C.J.,
CC   Bowser,L., Jones,T., Banh,J., Chen,H., Cheuk,R., Chung,M.K.,
CC   Kim,C., Lin,J., Liu,S.X., Pham,P.K., Sakano,H., Shinn,P.,
CC   Yamada,K., Ecker,J., Theologis,A. and Davis,R.W.
CC   Nguyen,M., (SSP/Stanford) and Seki,M. (RIKEN GSC) contributed
CC   equally to this work.  Shinozaki,K. (RIKEN GSC) and Davis,R.W.
CC   (SSP/Stanford) contributed equally to this work as PIs.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1194
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="IV"
FT                   /mol_type="mRNA"
FT                   /clone="RAFL05-12-M18"
FT                   /note="This clone is in pBluescript ecotype: Columbia"
FT                   /db_xref="taxon:3702"
FT   CDS             55..1104
FT                   /codon_start=1
FT                   /gene="AT4g09010"
FT                   /product="Putative L-ascorbate peroxidase"
FT                   /db_xref="GOA:P82281"
FT                   /db_xref="InterPro:IPR002016"
FT                   /db_xref="InterPro:IPR002207"
FT                   /db_xref="InterPro:IPR010255"
FT                   /db_xref="UniProtKB/Swiss-Prot:P82281"
FT                   /protein_id="AAK48961.1"
FT                   /translation="MGGVSFLSTVPSFTNTTNHQHLTTLSSSSHRSAVIRCSKIEPQVS
FT                   GESLAFHRRDVLKLAGTAVGMELIGNGFINNVGDAKAADLNQRRQRSEFQSKIKILLST
FT                   TIKAKPELVPSLLKLALNDAMTYDKATKSGGANGSIRFSSELSRAENEGLSDGLSLIEE
FT                   VKKEIDSISKGGPISYADIIQLAGQSAVKFTYLASAIRKCGGNEEKGNLLYTAYGSAGQ
FT                   WGLFDRNFGRSDATEADPEGRVPQWGKATVQEMKDKFIAVGLGPRQLAVMSAFLGPDQA
FT                   ATEQLLATDPQVAPWVQKYQRSRETVSQTDYEVDLITAFTKLSCLGQQINFEAYTYPVE
FT                   RINLSKLKL"
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SQ   Sequence 1194 BP; 358 A; 253 C; 259 G; 324 T; 0 other;
     tgagacaact ctttctcctt tcttctctct tctctgtctc atcacaaacc agaaatggga        60
     ggagtgtcct tcctctccac tgttccttcc ttcaccaaca caaccaatca tcaacatctc       120
     actacactct cttcttcttc tcatcgctct gctgttatac gatgttccaa gattgaacct       180
     caagtttccg gtgaaagttt agctttccac cgccgtgatg ttctcaaact cgccggcact       240
     gcagtcggaa tggaattaat aggcaacggt ttcattaaca atgtgggtga tgcaaaagct       300
     gctgacttga atcaacgtag acaacgatcc gagtttcaat caaagatcaa gattttgctt       360
     tcaaccacca ttaaggctaa accggagctt gtaccttcct tactcaaact agctctcaat       420
     gatgctatga cttatgataa ggctactaaa tccgggggag ccaatggatc catacggttc       480
     agctctgagc taagtagagc agagaatgag ggactttctg atgggttgag tttgatagag       540
     gaagtgaaga aggagattga ctctatctcg aagggaggtc ctatttcata tgcagatatc       600
     attcaattag caggacaatc agcggtcaag tttacatatt tagcatcggc tatccgaaaa       660
     tgtggtggaa atgaagagaa ggggaactta ctttacacag catatggttc agctggtcag       720
     tggggattgt ttgatagaaa ttttggaagg agtgatgcaa cagaggctga tccagaaggc       780
     agagtcccac aatgggggaa agcaactgtg caagagatga aagataagtt cattgctgtt       840
     ggattgggtc ctcgtcagct agctgtaatg tctgcattct tgggtcctga tcaagctgca       900
     acagaacagc tcttagctac tgaccctcaa gttgctccat gggttcagaa gtatcaaaga       960
     agccgtgaaa ccgtatctca gactgattac gaggttgatc tcataactgc attcacaaag      1020
     ctaagttgct taggacagca aatcaacttc gaggcatata catatcccgt cgaacggatc      1080
     aatctgagca aactcaagct ataagctatg tacactatat gtataacatg agaggaaact      1140
     tcgaaataaa ccaaagattt ttcttgacat tgaaacaaaa agagaagttg aatt            1194
//
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