EBI Dbfetch
ID AY027539; SV 1; linear; mRNA; STD; PLN; 3156 BP.
XX
AC AY027539;
XX
DT 14-MAR-2001 (Rel. 67, Created)
DT 16-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE Zea mays chromomethylase (Zmet5) mRNA, complete cds.
XX
KW .
XX
OS Zea mays
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACCAD clade;
OC Panicoideae; Andropogoneae; Zea.
XX
RN [1]
RP 1-3156
RA Papa C.M., Springer N.M., Muszynski M.G., Kaeppler S.M.;
RT "Maize chromomethylase Zea Methyltransferase 2 (Zmet2) is required for
RT CpNpG Methylation";
RL Unpublished.
XX
RN [2]
RP 1-3156
RA Springer N.M., Papa C.M., Kaeppler S.M.;
RT ;
RL Submitted (13-FEB-2001) to the EMBL/GenBank/DDBJ databases.
RL Agronomy, University of Wisconsin, 1575 Linden Dr, Madison, WI 53706, USA
XX
FH Key Location/Qualifiers
FH
FT source 1..3156
FT /organism="Zea mays"
FT /chromosome="2"
FT /mol_type="mRNA"
FT /note="genotype: Mo17"
FT /db_xref="taxon:4577"
FT CDS 57..2804
FT /codon_start=1
FT /gene="Zmet5"
FT /product="chromomethylase"
FT /note="ZMET5"
FT /db_xref="GOA:Q9ARI6"
FT /db_xref="InterPro:IPR000953"
FT /db_xref="InterPro:IPR001025"
FT /db_xref="InterPro:IPR001525"
FT /db_xref="InterPro:IPR016197"
FT /db_xref="InterPro:IPR018117"
FT /db_xref="UniProtKB/Swiss-Prot:Q9ARI6"
FT /protein_id="AAK15805.1"
FT /translation="MAPSSPSSARPTRASGRERSAMAEEIHQNQEEEEEVVAASTAKRR
FT RKAASSGKKPKPTPKQAKPAVAGMKKKGETEKTEPVVDDVCAEEPDEEELAMGEEEAEA
FT EEQAMQEVVAAVAAGSPGKKRVGRRSAAASGDHVPEFIGSPVGAAEAHSNWPKRYERST
FT AANKPEEDDELKARCHYRSAKVDNIVYCLGDDVYVKAGENEADYIGRITEFFEGTDRCH
FT YFTCRWFFRAEDTVINSLVSINVDGHKHDPRRVFLSEEKNDNVLDCIISKVKIVHVDPN
FT MDPKAKAQLIEHCDLYYDMSYSVAYSTFANISSENGQSGSETASGISSDDAGLETSSNM
FT PERTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDLNSFACQSLKYNHPQTEVRN
FT EKADEFLALLKEWAVLCEKYVHQDVDSNLAGSEDQEDADTLDKDEFVVQKLIGIRYDGT
FT GRKKGVYFKVQWEEYGPEEDTWEPIDNLSDCPLKIREFVQEGRKRKILPLPGDVDVICG
FT GPPCQGISGFNRFRNRDEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYL
FT GKYALSCLVAMKYQARLGMMVAGCYGLPQFRMRVFLWGALSSMVLPKYPLPTYDVVVRG
FT GAPNAFSQCMVAYDETQRPSLKKALLLGDAFSDLPKVENHQPNDVMEYGGSPKTEFQRY
FT IRLGRKDMLDWSFGEEAGPDEGKLLDHQPLRLNNDDYERVKQIPVKKGANFRDLKGVKV
FT GANNVVEWDPEVERVYLSSGKPLVPDYAMSFIKGKSLKPFGRLWWDQTVPTVVTRAEPH
FT NQVILHPTQARVLTIRENARLQGFPDYYRLFGPIKEKYIQVGNAVAVPVARALGYCLGQ
FT AYLGESDGSQPLYQLPASFTSVGRTAVQANAASVGTPAGEVVEQ"
XX
SQ Sequence 3156 BP; 813 A; 686 C; 885 G; 772 T; 0 other;
ggccgcggga attcgatttt agatctagag cagcagcagc taccgcatcc cttgccatgg 60
cgccaagctc cccgtcatcc gctaggccca cgcgcgcctc cggccgggag cgctccgcca 120
tggccgagga gatccaccag aaccaggagg aggaggagga ggttgtggct gcgtccaccg 180
ccaagcgcag acgcaaggcg gcgtcttccg ggaagaagcc caagccgacg cccaagcagg 240
ccaaaccggc cgtggcgggg atgaagaaga agggggagac cgagaagacg gagcccgttg 300
tggacgacgt gtgcgccgag gagcccgacg aggaggagtt ggccatgggc gaggaggagg 360
cggaggccga ggagcaggcc atgcaggagg tggtggccgc ggtcgcggcc gggtcgcccg 420
gtaagaagag ggtggggaga aggagcgccg ccgcctcggg cgaccacgtg cccgagttca 480
tcggcagccc cgttggtgcg gccgaggcgc acagcaactg gcccaagcgc tacgagcgca 540
gcactgccgc aaataaaccg gaggaggacg atgagctcaa ggccaggtgc cactaccgga 600
gcgctaaggt ggacaacatt gtctactgcc tcggggatga cgtttatgtc aaggctggag 660
aaaatgaggc tgattacatt ggtcgcatta ctgaattttt tgagggcact gatcgatgcc 720
actattttac ttgccgttgg tttttccgtg cagaggacac ggtcatcaat tcgttggtgt 780
cgattaatgt tgatggccac aagcatgacc ctagacgtgt ttttctttcc gaggaaaaga 840
atgacaatgt gcttgattgc atcatctcca aggtcaagat agtccatgtt gatccaaata 900
tggatccaaa agctaaggcc caactgatag aacattgtga cctatactat gacatgtctt 960
actctgttgc atattctaca tttgctaata tctcatcaga aaatgggcag tcaggcagtg 1020
aaaccgcttc gggtatttct tctgatgatg cgggtttgga gacgtcatct aatatgccag 1080
agaggacagc aacccttctt gacttgtatt cgggctgtgg gggcatgtcc actggtcttt 1140
gcttgggtgc tgctctttct ggcctgaaac ttgaaactcg atgggctgtt gatcttaaca 1200
gttttgcgtg ccaaagttta aaatacaatc atccacagac tgaggtgcga aatgagaaag 1260
ctgatgagtt tcttgctctc cttaaggaat gggcagtctt atgtgaaaaa tatgttcatc 1320
aagacgtgga ttcgaattta gcaggttcag aggatcaaga ggatgctgac actcttgaca 1380
aggatgaatt tgttgtacag aagcttattg gaatacgcta tgatggcact ggaaggaaaa 1440
aaggcgtata ttttaaggtc caatgggaag aatatggtcc tgaagaggat acatgggaac 1500
ctattgataa cctgagtgac tgtccgctga aaattagaga atttgtacaa gaagggcgca 1560
aaagaaaaat tctcccgctt cctggtgatg ttgatgtcat ttgtggaggc ccaccatgtc 1620
aaggtataag tgggtttaat cggttcagga accgtgatga gccacttaaa gatgagaaaa 1680
acaagcaaat ggtgactttc atggatattg tggcatactt gaagcccaag tatgttctca 1740
tggaaaatgt cgtggacata ctgaaatttg ctgatggcta cctaggaaaa tatgctttga 1800
gctgcctagt tgctatgaag taccaagcac gccttggaat gatggtggca ggctgctatg 1860
gtctgccaca gttcaggatg cgtgtgttcc tctggggtgc tctttcttcc atggtgctcc 1920
ctaagtatcc tctgcctaca tatgacgttg tagtacgtgg aggagcacct aatgcctttt 1980
cgcaatgtat ggttgcatat gatgagacac aaaggccatc cctgaagaaa gctttgcttc 2040
ttggtgatgc attttcagat ttaccaaagg tcgaaaacca tcaacctaac gatgtaatgg 2100
agtatggtgg ttcccccaag acagagttcc agcgctacat tcgacttggt cgtaaagaca 2160
tgttggattg gtcgtttggt gaggaggctg gtccagatga aggcaagctc ttggatcacc 2220
agcccttacg gcttaacaat gatgattatg agcgggttaa gcaaattcct gtcaagaagg 2280
gagccaactt ccgtgaccta aagggtgtca aggttggagc aaataatgtt gttgagtggg 2340
atccagaagt cgaacgtgtg tacctttcgt ctgggaaacc actggttcct gactatgcga 2400
tgtcattcat caagggcaaa tcactcaagc cattcgggcg cctgtggtgg gaccagacgg 2460
ttcctacagt tgtgaccaga gcagagcctc ataaccaggt tatattgcat ccgactcaag 2520
caagagtctt gactatccgg gagaacgcaa ggttacaggg cttccccgat tactaccgat 2580
tgtttggacc gatcaaggag aagtatattc aagtcgggaa cgcagtggca gtccctgttg 2640
cacgggcact gggctactgt ctgggtcaag cctacctggg tgaatctgac gggagtcagc 2700
ctctgtacca gctgcctgca agttttacct ctgtggggcg aaccgcggtt caggcgaatg 2760
ccgcttctgt tggcactcct gcgggggagg tagtcgagca gtaaaaggat agcggagcaa 2820
ccctggttgg tattttgatt cgagcccatc cagtagcatg tttaccaata aataatcatt 2880
ggtcgtgctg attcttatgg ttggagatga atgtatgtag ggtgtactcg agctcgagtg 2940
cttgttgtac tgtaggttga ggtttctcat ccattggcct gcctatttgt ggatgacgtt 3000
tcatttcaga ttagcaatgt gcttatttaa ggtttcgtca tgtacctgta ttctacaatc 3060
cactattgtt tccaaagaca gcatttgatc cttaaaaaaa actgtaaaaa aaaaaaaaca 3120
gtgcccgaaa agccgcaaaa aaaaaaaaaa aaaaaa 3156
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