EBI Dbfetch
ID BC165872; SV 1; linear; mRNA; STD; VRT; 1417 BP.
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AC BC165872;
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DT 14-APR-2008 (Rel. 95, Created)
DT 24-AUG-2008 (Rel. 96, Last updated, Version 3)
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DE Danio rerio 1-acylglycerol-3-phosphate O-acyltransferase 9, mRNA (cDNA
DE clone MGC:192960 IMAGE:100061447), complete cds.
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KW MGC.
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OS Danio rerio (zebrafish)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Cyprinidae; Danio.
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RN [1]
RP 1-1417
RX DOI; 10.1073/pnas.242603899.
RX PUBMED; 12477932.
RG Mammalian Gene Collection Program Team
RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D.,
RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F.,
RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H.,
RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K.,
RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F.,
RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S.,
RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J.,
RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J.,
RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M.,
RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X.,
RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S.,
RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G.,
RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C.,
RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I.,
RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.;
RT "Generation and initial analysis of more than 15,000 full-length human and
RT mouse cDNA sequences";
RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002).
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RN [2]
RC NIH-MGC Project URL: http://mgc.nci.nih.gov
RP 1-1417
RG NIH MGC Project
RA ;
RT ;
RL Submitted (12-APR-2008) to the EMBL/GenBank/DDBJ databases.
RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda,
RL MD 20892-2590, USA
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DR Ensembl-Gn; ENSDARG00000011371; Danio_rerio.
DR Ensembl-Gn; ENSDARG00000016048; Danio_rerio.
DR Ensembl-Gn; ENSDARG00000026787; Danio_rerio.
DR Ensembl-Gn; ENSDARG00000035538; Danio_rerio.
DR Ensembl-Gn; ENSDARG00000058738; Danio_rerio.
DR Ensembl-Gn; ENSDARG00000068465; Danio_rerio.
DR Ensembl-Gn; ENSDARG00000070787; Danio_rerio.
DR Ensembl-Gn; ENSDARG00000071241; Danio_rerio.
DR Ensembl-Gn; ENSDARG00000074508; Danio_rerio.
DR Ensembl-Gn; ENSDARG00000077689; Danio_rerio.
DR Ensembl-Tr; ENSDART00000003891; Danio_rerio.
DR Ensembl-Tr; ENSDART00000008389; Danio_rerio.
DR Ensembl-Tr; ENSDART00000024248; Danio_rerio.
DR Ensembl-Tr; ENSDART00000032586; Danio_rerio.
DR Ensembl-Tr; ENSDART00000054119; Danio_rerio.
DR Ensembl-Tr; ENSDART00000081654; Danio_rerio.
DR Ensembl-Tr; ENSDART00000082154; Danio_rerio.
DR Ensembl-Tr; ENSDART00000099033; Danio_rerio.
DR Ensembl-Tr; ENSDART00000112328; Danio_rerio.
DR Ensembl-Tr; ENSDART00000113997; Danio_rerio.
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CC Contact: MGC help desk
CC Email: cgapbs-r@mail.nih.gov
CC Tissue Procurement: Genecopoeia
CC cDNA Library Preparation: GeneCopoeia, Inc
CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC DNA Sequencing by: (null)
CC Clone distribution: MGC clone distribution information can be found
CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC Series: OCAF Plate: 21 Row: c Column: 3.
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FH Key Location/Qualifiers
FH
FT source 1..1417
FT /organism="Danio rerio"
FT /lab_host="DH10B"
FT /mol_type="mRNA"
FT /clone_lib="NIH_ZGC_50"
FT /clone="MGC:192960 IMAGE:100061447"
FT /tissue_type="PCR rescue, ZGC template clones."
FT /note="Vector: pENTR221, with TAG stop codon"
FT /db_xref="taxon:7955"
FT gene 1..1417
FT /gene="agpat9"
FT /note="synonyms: wu:fd56f04, zgc:91857"
FT CDS 35..1384
FT /codon_start=1
FT /gene="agpat9"
FT /product="agpat9 protein"
FT /protein_id="AAI65872.1"
FT /translation="MEGAWDVAFVLLHVWMSIVAGLIVLPAMFGVSLGFTDIYIKLLVK
FT TLEWATLRIQRGQKEQPTLPLQLANGIIEKDDGSMEEEIVELRRSHPKNLAEGNFTLCD
FT AFYFCKKGIENIVEDQVTQRFSSEELASWNLLTRTNNNFRYISVRLTIIWGLGVFVRYC
FT VLLPLRITLAVIGLSWLVIGTTLVGFLPNSKVKNWLSDLVHITCYRICARGLSATIRYH
FT NKENRPKKGGICVANHTSPIDIVILANDGCYAMVGQVHGGLMGVIQRSMVRSCPHVWFE
FT RSEMKDRHAVAKRLKDHISDKTKLPILIFPEGTCINNTSVMMFKKGSFEFGGTIYPVAI
FT KYDPRFGDAFWNSAKYNMVSYILRMMTSWAIVCNVWYLPPMTQQDGEDAVHFANRVKSA
FT IAHQGGLVDLSWDGGLKRSKVKESFKEEQQKMYSSMIVGLDSHEATVGPA"
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SQ Sequence 1417 BP; 381 A; 304 C; 365 G; 367 T; 0 other;
gtacaaaaaa gcaggcttga aggaattcgg taccatggaa ggtgcttggg acgtcgcttt 60
cgtgcttctc catgtgtgga tgtccatagt agcgggtctc atcgtgttac ctgctatgtt 120
cggtgtgtcc ctgggcttca cagacatcta catcaagctg ctggttaaga cacttgagtg 180
ggccactctc aggatccaaa gaggacagaa agaacagcca acactgccat tacagctagc 240
taacgggatc atcgagaaag atgacggatc tatggaagag gaaattgtag agctgcgtcg 300
ctctcatcct aaaaatctgg cagagggaaa ctttacgctg tgtgacgcct tctatttctg 360
taagaaaggc attgagaaca ttgtggagga tcaggtgact cagcgcttct cttctgagga 420
actggcctcc tggaatctcc tcacacgaac caataacaac tttcgataca tcagcgtgcg 480
cctcaccatc atatggggcc tgggagtttt tgtacgttac tgtgtcttat tgcctctcag 540
gatcacttta gcagtcattg gattgagctg gttggtgatt ggaactactc tagttggatt 600
tcttccaaac agcaaggtga agaactggct cagtgattta gttcatatta catgctacag 660
aatatgtgcc agaggcctgt ctgctactat ccgttatcat aataaagaga accgtccgaa 720
aaaaggaggc atctgtgttg ccaaccacac ttccccgatt gacattgtca tcttggcgaa 780
tgatggatgt tacgctatgg taggtcaagt tcatggaggc ctcatggggg tcatccagag 840
gtcaatggtg cgctcctgtc cccatgtatg gtttgagagg tctgagatga aagatcgcca 900
tgccgttgcc aaaaggttga aagaccatat ttcagataaa actaagctgc caatcttgat 960
cttccctgag ggaacttgca ttaataatac atcagtcatg atgttcaaaa agggaagctt 1020
tgaatttggt ggaactatat acccagtagc aatcaagtat gaccctcgct ttggagatgc 1080
cttctggaac agtgccaaat acaacatggt gagctacatc ctcagaatga tgacaagctg 1140
ggccattgtg tgcaacgtgt ggtacctgcc acctatgact caacaggatg gagaggatgc 1200
tgttcatttt gctaacagag tgaagtcagc catagcacat caaggaggac tggtggattt 1260
gtcctgggat ggaggactga agaggtcaaa ggtgaaagaa tcattcaagg aggagcagca 1320
gaagatgtac agcagtatga ttgtaggttt ggactctcac gaagccactg ttggacccgc 1380
gtagctcgag tgcggccgca acccagcttt cttgtac 1417
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