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EBI Dbfetch
ID BC057912; SV 1; linear; mRNA; STD; MUS; 1824 BP.
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AC BC057912;
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DT 01-OCT-2003 (Rel. 77, Created)
DT 24-SEP-2008 (Rel. 97, Last updated, Version 8)
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DE Mus musculus cytochrome P450, family 2. subfamily c, polypeptide 37, mRNA
DE (cDNA clone MGC:68185 IMAGE:5052873), complete cds.
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KW MGC.
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OS Mus musculus (house mouse)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea;
OC Muridae; Murinae; Mus.
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RN [1]
RP 1-1824
RX DOI; 10.1073/pnas.242603899.
RX PUBMED; 12477932.
RG Mammalian Gene Collection Program Team
RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D.,
RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F.,
RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H.,
RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K.,
RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F.,
RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S.,
RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J.,
RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J.,
RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M.,
RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X.,
RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S.,
RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G.,
RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C.,
RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I.,
RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.;
RT "Generation and initial analysis of more than 15,000 full-length human and
RT mouse cDNA sequences";
RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002).
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RN [2]
RC NIH-MGC Project URL: http://mgc.nci.nih.gov
RP 1-1824
RG NIH MGC Project
RA ;
RT ;
RL Submitted (08-SEP-2003) to the EMBL/GenBank/DDBJ databases.
RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda,
RL MD 20892-2590, USA
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DR Ensembl-Gn; ENSMUSG00000042248; Mus_musculus.
DR Ensembl-Gn; ENSMUSG00000054827; Mus_musculus.
DR Ensembl-Tr; ENSMUST00000049178; Mus_musculus.
DR Ensembl-Tr; ENSMUST00000068094; Mus_musculus.
DR Ensembl-Tr; ENSMUST00000080171; Mus_musculus.
DR ImaGenes; IMAGp998N1011143Q.
DR ImaGenes; IRAKp961F13123Q.
DR ImaGenes; IRAVp968E0298D.
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CC Contact: MGC help desk
CC Email: cgapbs-r@mail.nih.gov
CC Tissue Procurement: Jeffrey E. Green, M.D.
CC cDNA Library Preparation: Life Technologies, Inc.
CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC DNA Sequencing by: National Institutes of Health Intramural
CC Sequencing Center (NISC),
CC Gaithersburg, Maryland;
CC Web site: http://www.nisc.nih.gov/
CC Contact: nisc_mgc@nhgri.nih.gov
CC Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
CC Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
CC Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
CC Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
CC Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
CC McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
CC Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
CC Young,A., Zhang,L.-H. and Green,E.D.
CC Clone distribution: MGC clone distribution information can be found
CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC Series: IRAK Plate: 123 Row: f Column: 13
CC This clone was selected for full length sequencing because it
CC passed the following selection criteria: matched mRNA gi: 45504401.
CC Differences found between this sequence and the mouse C57BL/6J
CC genome (build 36) are described in misc_difference features below.
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FH Key Location/Qualifiers
FH
FT source 1..1824
FT /organism="Mus musculus"
FT /lab_host="DH10B"
FT /strain="FVB/N"
FT /mol_type="mRNA"
FT /clone_lib="NCI_CGAP_Li9"
FT /clone="MGC:68185 IMAGE:5052873"
FT /tissue_type="Liver, normal. 5 month old male mouse."
FT /note="Vector: pCMV-SPORT6"
FT /db_xref="taxon:10090"
FT gene 1..1824
FT /gene="Cyp2c37"
FT CDS 2..1474
FT /codon_start=1
FT /gene="Cyp2c37"
FT /product="cytochrome P450, family 2. subfamily c,
FT polypeptide 37"
FT /db_xref="GOA:P56654"
FT /db_xref="InterPro:IPR001128"
FT /db_xref="InterPro:IPR002401"
FT /db_xref="InterPro:IPR017972"
FT /db_xref="InterPro:IPR017973"
FT /db_xref="MGI:1306806"
FT /db_xref="UniProtKB/Swiss-Prot:P56654"
FT /protein_id="AAH57912.1"
FT /translation="MDPILVLVLTLSCLFLLSLWRQSSERGKLPPGPTPLPIIGNILQI
FT DVKDICQSFTNLSKVYGPVYTLYLGRKPTVVLHGYEAVKEALVDHGEEFAGRGRFPVFD
FT KATNGMGLAFSKGNVWKNTRRFSLMTLRNLGMGKRSIEDRVQEEARCLVEELRKTNGSP
FT CDPTFILGCAPCNVICSIIFQDRFDYKDRDFLNLMEKLNEITKILSSPWLQICNTYPAL
FT LDYCPGSHKQFFKNYACIKNFLLEKIKEHEESLDVTIPRDFIDYFLINGGQEDGNQPLQ
FT NRLEHLAITVTDLFSAGTETTSTTLRYALLLLLKYPHVTAKVQKEIEHVIGKHRSPCMQ
FT DRSRMPYTDAMIHEVQRFIDLIPNSLPHEVTCDIKFRNYFIPKGTTVITSLSSVLHDST
FT EFPNPEVFDPGHFLDGNGKFKKSDYFMPFSTGKRICAGEGLARMELFLFLTSILQSFNL
FT KPLVHPKDIDVTPMLIGLGSVPPAFQLCFIPS"
FT misc_difference 442
FT /gene="Cyp2c37"
FT /note="'A' in cDNA is 'G' in the mouse genome; no amino
FT acid change."
FT misc_difference 523
FT /gene="Cyp2c37"
FT /note="'C' in cDNA is 'T' in the mouse genome; no amino
FT acid change."
FT misc_difference 717
FT /gene="Cyp2c37"
FT /note="'G' in cDNA is 'C' in the mouse genome; amino acid
FT difference: 'C' in cDNA, 'S' in the mouse genome."
FT misc_difference 826
FT /gene="Cyp2c37"
FT /note="'C' in cDNA is 'T' in the mouse genome; no amino
FT acid change."
FT misc_difference 929
FT /gene="Cyp2c37"
FT /note="'C' in cDNA is 'A' in the mouse genome; amino acid
FT difference: 'L' in cDNA, 'I' in the mouse genome."
FT misc_difference 940
FT /gene="Cyp2c37"
FT /note="'G' in cDNA is 'C' in the mouse genome; no amino
FT acid change."
FT misc_difference 974
FT /gene="Cyp2c37"
FT /note="'A' in cDNA is 'G' in the mouse genome; amino acid
FT difference: 'K' in cDNA, 'E' in the mouse genome."
FT misc_difference 1012
FT /gene="Cyp2c37"
FT /note="'T' in cDNA is 'A' in the mouse genome; no amino
FT acid change."
FT misc_difference 1115
FT /gene="Cyp2c37"
FT /note="'T' in cDNA is 'A' in the mouse genome; amino acid
FT difference: 'C' in cDNA, 'S' in the mouse genome."
FT misc_difference 1216..1219
FT /gene="Cyp2c37"
FT /note="in the mouse genome : GAAA."
FT misc_difference 1245
FT /gene="Cyp2c37"
FT /note="'G' in cDNA is 'A' in the mouse genome; amino acid
FT difference: 'G' in cDNA, 'E' in the mouse genome."
FT misc_difference 1273
FT /gene="Cyp2c37"
FT /note="'T' in cDNA is 'C' in the mouse genome; no amino
FT acid change."
FT misc_difference 1279
FT /gene="Cyp2c37"
FT /note="'G' in cDNA is 'T' in the mouse genome; amino acid
FT difference: 'M' in cDNA, 'I' in the mouse genome."
FT misc_difference 1365
FT /gene="Cyp2c37"
FT /note="'G' in cDNA is 'A' in the mouse genome; amino acid
FT difference: 'S' in cDNA, 'N' in the mouse genome."
FT misc_difference 1431
FT /gene="Cyp2c37"
FT /note="'G' in cDNA is 'C' in the mouse genome; amino acid
FT difference: 'G' in cDNA, 'A' in the mouse genome."
FT misc_difference 1435
FT /gene="Cyp2c37"
FT /note="'A' in cDNA is 'G' in the mouse genome; no amino
FT acid change."
FT misc_difference 1496
FT /gene="Cyp2c37"
FT /note="'T' in cDNA is 'C' in the mouse genome."
FT misc_difference 1552
FT /gene="Cyp2c37"
FT /note="'C' in cDNA is 'A' in the mouse genome."
FT misc_difference 1586
FT /gene="Cyp2c37"
FT /note="'G' in cDNA is 'A' in the mouse genome."
FT misc_difference 1611
FT /gene="Cyp2c37"
FT /note="'T' in cDNA is 'A' in the mouse genome."
FT misc_difference 1632
FT /gene="Cyp2c37"
FT /note="'C' in cDNA is 'T' in the mouse genome."
FT misc_difference 1652
FT /gene="Cyp2c37"
FT /note="'T' in cDNA is 'A' in the mouse genome."
FT misc_difference 1654
FT /gene="Cyp2c37"
FT /note="'G' in cDNA is 'T' in the mouse genome."
FT misc_difference 1666
FT /gene="Cyp2c37"
FT /note="'G' in cDNA is 'A' in the mouse genome."
FT misc_difference 1690
FT /gene="Cyp2c37"
FT /note="'A' in cDNA is 'G' in the mouse genome."
FT misc_difference 1698
FT /gene="Cyp2c37"
FT /note="'G' in cDNA is 'T' in the mouse genome."
FT misc_difference 1706
FT /gene="Cyp2c37"
FT /note="'T' in cDNA is 'C' in the mouse genome."
FT misc_difference 1746
FT /gene="Cyp2c37"
FT /note="'A' in cDNA is 'G' in the mouse genome."
FT misc_difference 1764
FT /gene="Cyp2c37"
FT /note="'G' in cDNA is 'A' in the mouse genome."
FT misc_difference 1811..1824
FT /gene="Cyp2c37"
FT /note="polyA tail: 14 bases do not align to the mouse
FT genome."
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SQ Sequence 1824 BP; 519 A; 413 C; 372 G; 520 T; 0 other;
catggatcca atcctggtcc tggtgctcac tctctcctgt ctgtttctcc tctcactctg 60
gagacagagc tctgaaaggg ggaagctccc tcctggcccc actcctcttc caattattgg 120
aaacatcctt cagatagatg tgaaggacat ctgccaatcc ttcaccaatt tatcaaaagt 180
ttatggccct gtgtatactc tatatttggg caggaagccc actgtggtgt tgcatggata 240
tgaggcagtg aaggaagctc tggttgacca tggggaggag tttgctggaa ggggaaggtt 300
cccagttttt gataaagcta ctaatggaat gggccttgca tttagtaaag gaaatgtatg 360
gaaaaacacg aggcgtttct cactcatgac gctgcggaat ttaggcatgg gaaaaaggag 420
cattgaggac cgcgttcaag aagaagcacg ttgccttgtg gaggaactta ggaaaaccaa 480
tggctcaccc tgtgatccca ccttcatcct gggctgtgct ccctgcaatg tcatctgctc 540
aattattttc caggatcgtt ttgattataa agatcgggat tttcttaact tgatggaaaa 600
actgaatgaa ataacaaaga ttctgagcag cccttggttg cagatttgca atacatatcc 660
tgctctgctt gattattgtc caggaagtca taaacaattt tttaaaaatt atgcttgtat 720
taaaaatttc cttttggaga aaataaaaga acatgaagaa tcattggatg ttacaattcc 780
tcgtgacttt attgattatt tcctaattaa tggaggccag gaagacggca atcaaccatt 840
gcaaaatagg cttgaacacc tggcaataac agtgactgat cttttttctg ctgggacaga 900
gacaacaagc acaacactga gatatgctct cctactcctg ttgaagtacc cacatgtcac 960
agctaaagtc cagaaagaaa ttgagcatgt gatcggcaag caccgaagcc cttgcatgca 1020
ggacaggagc cgcatgccct atactgatgc catgattcat gaggtccaga gattcattga 1080
cctcatcccc aacagccttc cccatgaagt gacctgtgac attaaattca ggaactactt 1140
catccccaag ggaacaactg taataacatc actgtcatca gtgctgcatg acagcacgga 1200
gttccccaac ccagaagtgt ttgaccctgg ccactttcta gatgggaatg gaaagtttaa 1260
gaaaagtgac tatttcatgc ccttctcaac agggaaacgg atatgtgcag gagagggcct 1320
ggcacgcatg gagctgttcc tgttcctaac cagcatttta cagagcttca acctgaaacc 1380
tctggttcac ccaaaggaca tagatgtaac cccaatgctc attggattgg gctcagtgcc 1440
tcctgctttc cagctctgct tcattccttc ctgaaaatca aatgcctggc tccagttggg 1500
acatcttctg tgatcaccct gaggctttaa ttcactgctt tccacactgg acacactgac 1560
ttttatccag ttcttttgcc tcctcgtaat ttcataaggt tctatgaaca tacatttacc 1620
aatttgcaga tcctgcacaa atatttctga ctggtcctat tttctgaaac actgttacca 1680
tatgctgtga tgatatggac ctgattccaa gttaaatata ctctcataaa attgaaatta 1740
ctattacagg ataattcact gtcgcttctc ttctgcattt tcttaataat aaattgtttt 1800
ggtataccta aaaaaaaaaa aaaa 1824
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