EBI Dbfetch

ID   L14328; SV 2; linear; genomic DNA; STD; INV; 1852 BP.
XX
AC   L14328; AH003657; L14329;
XX
DT   17-APR-1993 (Rel. 35, Created)
DT   14-NOV-2006 (Rel. 89, Last updated, Version 12)
XX
DE   Schistosoma mansoni glutathione peroxidase (Gpx) gene, complete cds.
XX
KW   glutathione peroxidase.
XX
OS   Schistosoma mansoni
OC   Eukaryota; Metazoa; Platyhelminthes; Trematoda; Digenea; Strigeidida;
OC   Schistosomatoidea; Schistosomatidae; Schistosoma.
XX
RN   [1]
RP   1-1852
RX   DOI; 10.1016/0378-1119(94)90798-6.
RX   PUBMED; 8125294.
RA   Roche C., Williams D.L., Khalife J., LePresle T., Capron A., Pierce R.J.;
RT   "Cloning and characterization of the gene encoding Schistosoma mansoni
RT   glutathione peroxidase";
RL   Gene 138(1-2):149-152(1994).
XX
DR   RFAM; RF00031; SECIS.
XX
CC   On or before Sep 20, 2006 this sequence version replaced gi:294858,
CC   gi:468926, gi:468925.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1852
FT                   /organism="Schistosoma mansoni"
FT                   /strain="Puerto Rican"
FT                   /mol_type="genomic DNA"
FT                   /sex="male/female"
FT                   /dev_stage="adult worm"
FT                   /db_xref="taxon:6183"
FT   TATA_signal     41..47
FT   gene            74..1744
FT                   /gene="Gpx"
FT   mRNA            join(74..296,330..415,467..611,644..792,823..907,
FT                   1526..1744)
FT                   /gene="Gpx"
FT                   /product="glutathione peroxidase"
FT   exon            74..296
FT                   /gene="Gpx"
FT                   /number=1
FT                   /note="putative"
FT   5'UTR           74..293
FT                   /gene="Gpx"
FT   CDS             join(294..296,330..415,467..611,644..792,823..907,
FT                   1526..1567)
FT                   /codon_start=1
FT                   /transl_except=(pos:504..506,aa:Sec)
FT                   /gene="Gpx"
FT                   /product="glutathione peroxidase"
FT                   /note="selenocysteine"
FT                   /db_xref="GOA:Q00277"
FT                   /db_xref="InterPro:IPR000889"
FT                   /db_xref="InterPro:IPR012335"
FT                   /db_xref="InterPro:IPR012336"
FT                   /db_xref="PDB:2V1M"
FT                   /db_xref="PDB:2WGR"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q00277"
FT                   /protein_id="AAB08485.2"
FT                   /translation="MSSSHKSWNSIYEFTVKDINGVDVSLEKYRGHVCLIVNVACKUGA
FT                   TDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPWAEAEIKKFVTEKYGVQFDMFSKI
FT                   KVNGSDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKRYSPTTAPYDIEGDIM
FT                   ELLEKK"
FT   exon            330..415
FT                   /gene="Gpx"
FT                   /number=2
FT   exon            467..611
FT                   /gene="Gpx"
FT                   /number=3
FT   exon            644..792
FT                   /gene="Gpx"
FT                   /number=4
FT   exon            823..907
FT                   /gene="Gpx"
FT                   /number=5
FT   gap             1263..1362
FT                   /estimated_length=unknown
FT   exon            1526..1744
FT                   /gene="Gpx"
FT                   /number=6
FT   3'UTR           1568..1744
FT                   /gene="Gpx"
FT   polyA_signal    1724..1729
FT                   /gene="Gpx"
XX
SQ   Sequence 1852 BP; 512 A; 315 C; 325 G; 600 T; 100 other;
     atagaatcta ctcaacgagg aaaaattacc actgtccttt ttaaatagcg cgcgttgtgc        60
     gagaatgcat tttgtactaa tttacataga cctctctgat aagtttttca cacattcaga       120
     tacttacctg tggacatacg tgatccaatg ctgcagatta aggagactct ttgatcaaat       180
     tctgcttcaa ttctgttccc aaccatttga aacacttgta caccagccta gaggtgtttt       240
     gccgctcctt attcaaatct ctcgaaacat tgttcacgat tagatgtaac gcgatggtac       300
     gttgtggtcc ctctaatttc ttccttaagt cttcatctca caagtcttgg aattcaatat       360
     atgaattcac tgttaaggat atcaatggtg tggatgtctc cttagagaaa taccggtatg       420
     ttcgatatta ctctcctata tagaataata attatttgtt gtttagtggt cacgtttgtc       480
     taattgttaa tgtcgcttgc aagtgaggcg caacggacaa gaactatcgc caactccagg       540
     agatgcacac tcgactggtt ggcaaaggcc tccgtatatt agcattcccc tgcaatcaat       600
     tcggtggaca ggtgtgtatc acttaaacca atattatttg caggaaccct gggcagaagc       660
     ggagattaag aagttcgtga ctgagaagta cggcgtccaa ttcgatatgt tttcgaagat       720
     aaaagtcaat gggtctgacg ctgatgatct ttataaattc ctcaaaagta gacaacatgg       780
     taccttaaca aagtaattgt tttttctttg ttactgtcgt agtaatatta agtggaactt       840
     ctcaaaattt cttgtagatc gtcaaggaca accggttaaa agatattctc ctacaactgc       900
     cccatatgtg agttgttgaa ttttcaatat tttgatttta ttatcagttc cgactgtcta       960
     aatagataga agtaacttaa ggataaatta gcaaactcag caatctatcc tatacacttc      1020
     gatttttcct gaattattga gatattttgt cgtccacgtc acgtagctta tagtctctgt      1080
     ggttttgaag ttgttattaa gaaagtttac tcatttaaac atttagtcgg ttagtgactt      1140
     cgctgaacag tggttgttta ggtgatttga tcaatgcgtt tccaaactag tcgtacctca      1200
     aaagtggtta tactccgaaa aaactatctg gactcaacat atcacctcat agccgtgcat      1260
     gtnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1320
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnccaaacaa ttccttgatt      1380
     ttgaccgtct accgtattag gtggttaatc ccaagtatga tgcttaatgt ctaatagtaa      1440
     gaaatttcat gagactgtta taattctatc gataagtaat gacatatgtt ttaagatttc      1500
     tgaccgaact tttaattttt tgtaggatat tgaaggagat atcatggagc ttttggagaa      1560
     gaagtgatca atggaactta tgagctttga acaaattctc gctatatgac gatggcaatc      1620
     tcaaatgttc attggttgcc atttgatgaa atcagttttg tgtgcacctg attgcagaat      1680
     tttgtttacc ttgctcattt ttttcattga aaccacttct cagaataaat gtgttatcta      1740
     taattgaatg acttgtactt cactggactt gcttaagagt tgactgaaat gcttgtcatc      1800
     gtaattacca accaatttaa tttcagaagt tgaacaatag tagttggact at              1852
//