EBI Dbfetch
ID J05004; SV 1; linear; genomic DNA; STD; PRO; 3660 BP.
XX
AC J05004;
XX
DT 02-FEB-1990 (Rel. 22, Created)
DT 17-APR-2005 (Rel. 83, Last updated, Version 5)
XX
DE Vibrio harveyi N,N'-diacetylchitobiase (chb) gene, complete cds, and ORF.
XX
KW chitobiase; chitobiose; N,N'-diacetylchitobiose; N-N'-diacetylchitobiase;
KW ORF; outer membrane lipoprotein.
XX
OS Vibrio harveyi
OC Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Vibrio.
XX
RN [1]
RP 1-3660
RX PUBMED; 2670926.
RA Soto-Gil R.W., Zyskind J.W.;
RT "N,N'-diacetylchitobiase of Vibrio harveyi. Primary structure, processing,
RT and evolutionary relationships";
RL J. Biol. Chem. 264(25):14778-14783(1989).
XX
CC Draft entry and computer-readable sequence for [1] kindly submitted
CC by J.W.Zyskind, 14-JUN-1989.
XX
FH Key Location/Qualifiers
FH
FT source 1..3660
FT /organism="Vibrio harveyi"
FT /strain="B392"
FT /mol_type="genomic DNA"
FT /clone="pRSG16."
FT /db_xref="taxon:669"
FT mRNA 296..>3098
FT /gene="chb"
FT gene 296..3098
FT /gene="chb"
FT CDS 447..3098
FT /codon_start=1
FT /transl_table=11
FT /gene="chb"
FT /product="N,N'-diacetylchitobiase"
FT /EC_number="3.2.1.30"
FT /note="precursor"
FT /db_xref="GOA:P13670"
FT /db_xref="InterPro:IPR001540"
FT /db_xref="InterPro:IPR004866"
FT /db_xref="InterPro:IPR004867"
FT /db_xref="InterPro:IPR008965"
FT /db_xref="InterPro:IPR012291"
FT /db_xref="InterPro:IPR013781"
FT /db_xref="InterPro:IPR013812"
FT /db_xref="InterPro:IPR014756"
FT /db_xref="InterPro:IPR015882"
FT /db_xref="InterPro:IPR015883"
FT /db_xref="InterPro:IPR017853"
FT /db_xref="UniProtKB/Swiss-Prot:P13670"
FT /protein_id="AAA88682.1"
FT /translation="MLKHSLIAASVITTLAGCSSLQSSEQQVVNSLADNLDIQYEVLTN
FT HGANEGLACQDMGAEWASCNKVNMTLVNQGEAVDSKDWAIYFHSIRLILDVDNEQFKIS
FT RVTGDLHKLEPTDKFDGFAAGEEVVLPLVGEYWQLFETDFMPGAFVSAPNAEPKMIASL
FT NTEDVASFVTGLEGNNLKRTPDDNNVFANAVSRFEKNEDLATQDVSTTLLPTPMHVEAG
FT KGKVDIADGIALPKDAFDATQFAAIQDRAEVVGVDVRGDLPVSITVVPADFTGELAKSG
FT AYEMSIKGDGIVIKAFDQAGAFYAVQSIFGLVDSQNADSLPQLSIKDAPRFDYRGVMVD
FT VARNFHSKDAILATLDQMAAYKMNKLHLHLTDDEGWRLEIPGLPELTEVGANRCFDTQE
FT KSCLLPQLGSGPTTDNFGSGYFSKADYVEILKYAKARNIEVIPEIDMPAHARAAVVSME
FT ARYDRLMEEGKEAEANEYRLMDPQDTSNVTTVQFYNKQSFINPCMESSTRFVDKVISEV
FT AAMHQEAGAPLTTWHFGGDEAKNIKLGAGFQDVNAEDKVSWKGTIDLSKQDKPFAQSPQ
FT CQTLITDGTVSDFAHLPSHFAEEVSKIVAEKGIPNFQAWQDGLKYSDGEKAFATENTRV
FT NFWDVLYWGGTSSVYEWSKKGYDVIVSNPDYVYMDMPYEVDPKERGYYWATRATDTRKM
FT FGFAPENMPQNAETSVDRDGNGFTGKGEIEAKPFYGLSAQLWSETVRNDEQYEYMVFPR
FT VLAAAQRAWHRADWENDYKVGVEYSQNSNLVDKASLNQDYNRFANVLGQRELAKLEKSG
FT IDYRLPVPGAKVEDGKLAMNVQFPGVTLQYSLDGENWLTYADNARPNVTGEVFIRSVSA
FT TGEKVSRITSVK"
FT sig_peptide 447..497
FT /gene="chb"
FT mat_peptide 498..3095
FT /gene="chb"
FT /product="N,N'-diacetylchitobiase"
FT /EC_number="3.2.1.30"
FT terminator 3136..3165
FT /note="putative"
FT CDS 3549..>3660
FT /codon_start=1
FT /transl_table=11
FT /product="unknown protein"
FT /note="ORF; putative"
FT /db_xref="UniProtKB/TrEMBL:Q56695"
FT /protein_id="AAA88683.1"
FT /translation="MKNVLALSALSLVFASSAFAGSSYVTGNIQFHDDGRI"
XX
SQ Sequence 3660 BP; 1076 A; 752 C; 812 G; 1020 T; 0 other;
gaattcaata agcactttat ctataacatg gttcggcaaa atcgtcattt tttaaaaaat 60
tgacgagttt taacggctag gaaatgagag gtaattcacg aaagtgtttc aattgagttt 120
gttgttaatg gttcacttaa taaccaatag tgatcagaat cctacaaaat cagtcaaaac 180
ccatcgatat tcgtgattga gatcgcaaca aactcgtcaa aaaaagttag ccgcttttaa 240
cgtaaagttt aacttgttga aattattatt tttatatttt tgaatgcttg gcttaatttg 300
agccagatca cttcttagtt ttattaattt tacgcttaga aataactgct tgtatgttga 360
atgcaactgt taagcgcctc gcatttaggt gctcaccatt tttaataaat gtcgttttga 420
accactgact ttttggggaa agtaagatgt tgaaacatag tctgattgct gcttctgtta 480
tcactacatt ggcaggctgc tcttcactac agagctctga gcaacaagtt gtaaactcac 540
tggctgataa ccttgatatc caatatgaag tgttaactaa ccatggtgct aacgaaggtc 600
ttgcgtgcca agatatgggc gcagaatggg cttcttgtaa caaagtaaac atgacgcttg 660
ttaaccaagg tgaagctgtt gactcaaaag attgggctat ttacttccac agcattcgtc 720
tgattctgga tgttgacaac gagcagttca aaatctctcg tgtaacgggt gacctacata 780
agctagaacc aacagataag tttgacggct tcgctgccgg tgaagaggtt gttcttccat 840
tggttggtga atactggcaa ctatttgaaa ctgacttcat gccgggtgca ttcgtttctg 900
ctccaaacgc agaacctaag atgattgctt ctctaaatac tgaagatgtt gcgtcttttg 960
tgacgggtct tgaaggtaac aacctaaaac gtacaccaga tgacaacaat gtatttgcaa 1020
acgctgtgtc tcgttttgag aaaaacgaag acctagcaac acaagacgta tcaaccacgt 1080
tactaccaac accaatgcac gttgaagcgg gtaaaggcaa agtagatatc gcggatggta 1140
ttgcgctgcc taaagacgca ttcgatgcga ctcagttcgc agcgattcaa gatcgtgcag 1200
aagtggtagg tgtggacgtt cgtggtgatc ttcctgtaag catcactgtt gttcctgcag 1260
acttcaccgg tgaattagca aaatctggtg cttacgaaat gagcatcaaa ggcgacggta 1320
ttgtgattaa agcgttcgac caagcaggcg ctttctacgc agtacaatct atctttggcc 1380
tggtagatag ccaaaatgct gattctctac cacaactgtc tattaaagat gcgcctcgtt 1440
ttgattaccg tggtgtgatg gtggatgtgg ctcgtaactt ccactctaag gacgcaatcc 1500
ttgcaacgct agaccaaatg gcagcgtaca agatgaacaa acttcacctt cacctaaccg 1560
atgatgaagg ctggcgttta gaaatcccgg gtctgcctga gctgacagaa gtgggtgcta 1620
accgttgttt cgatacacaa gagaaaagct gtttactgcc tcagcttggc tctggtccaa 1680
cgacagacaa ctttggctct ggctacttca gcaaagcaga ctacgtggaa atcttgaaat 1740
acgcgaaagc acgtaacatt gaagtgattc cagaaatcga tatgccagct cacgctcgtg 1800
cagcagtagt atcaatggaa gctcgttacg accgcctaat ggaagaaggt aaagaagctg 1860
aagcgaacga ataccgtctg atggatcctc aagatacatc aaacgtaacg acggttcagt 1920
tctacaataa gcaaagcttc atcaacccat gtatggaatc ttcaactcgc tttgttgata 1980
aggtgatttc agaagtggca gcaatgcacc aagaagctgg cgctccacta acaacttggc 2040
acttcggtgg tgacgaagcg aagaacatca agctaggtgc tggtttccaa gacgttaacg 2100
cagaagataa agtaagctgg aaaggcacga ttgacctgtc taaacaagac aagccgtttg 2160
cacagtctcc acaatgtcag acgctaatca cagatggcac agtcagtgac tttgctcacc 2220
taccaagcca cttcgcggaa gaagtgtcga agattgttgc tgagaaaggc attccaaact 2280
tccaagcttg gcaagatggt ttgaaataca gtgacggcga aaaagcgttc gctacagaaa 2340
atactcgcgt aaacttctgg gacgttctgt actggggcgg tacttcctca gtgtacgagt 2400
ggtctaagaa aggttacgac gtgattgttt ctaacccaga ttacgtgtac atggatatgc 2460
catacgaagt tgacccgaaa gagcgtggtt actactgggc aacacgtgca acggatactc 2520
gtaagatgtt tggctttgca ccagagaaca tgcctcaaaa cgcagaaact tctgtagatc 2580
gcgatggcaa tggctttact ggtaaaggtg aaatcgaagc gaaacctttc tacggtctat 2640
ctgcacaact ttggtctgag acagtacgta acgacgagca atacgagtac atggtattcc 2700
ctcgcgtcct cgctgctgct cagcgtgcat ggcaccgtgc tgactgggaa aacgactaca 2760
aagttggtgt tgagtactcg caaaactcta atctagttga taaagcatcg ctaaaccaag 2820
actacaaccg ctttgcgaac gtacttggtc aacgtgaact ggctaagcta gaaaaatcag 2880
gtattgacta ccgcctacca gtaccaggtg caaaagtaga agatggtaag ctagcaatga 2940
acgttcagtt ccctggcgta acgcttcaat actctctgga tggtgagaac tggttgactt 3000
atgcagacaa cgctcgtcca aatgtaactg gtgaagtctt catccgctcg gtatctgcga 3060
caggtgagaa ggtaagccgt atcactagcg tgaaataata gcgctcagta ttcactaaaa 3120
tcatagttcc ttactcaaag ccctcaactt atgttggggg ctttgtttat ttttcttcgg 3180
aaaataagcg tgatcaatgt ctaattattt tttattgata attaagtttc taatttaggg 3240
tgtctgtcat agtgtgatct ggatgtgtat ttaactgtca aataaaaggg gagatatgcc 3300
ttacttcaca ctttattttt tttacgaatt tttagttttt atatcaaacc actgtattta 3360
ataaactttt tttaatttcg aaaatcacga tttgaatttg atcactgttt taaacgattt 3420
atttttcaat gcgaattaaa ttgcgcagta ttgccgtcgc cagggaggca catcccaaag 3480
tatgtgatga gaggcaagtg atagccaaaa aactcgtcgc ataacgtgaa caaataaagg 3540
cagtaattat gaaaaacgtt ttagcactaa gtgcactttc tcttgttttc gcttcaagcg 3600
ctttcgcggg ttcatcttat gtaactggta acatccaatt ccacgatgac ggtcgaattc 3660
//
 |