EBI Dbfetch
ID M83562; SV 1; linear; genomic DNA; STD; PRO; 2601 BP.
XX
AC M83562;
XX
DT 04-FEB-1992 (Rel. 30, Created)
DT 04-MAR-2000 (Rel. 63, Last updated, Version 6)
XX
DE Vibrio cholerae neuraminidase (nanH) gene, complete cds.
XX
KW neuraminidase.
XX
OS Vibrio cholerae
OC Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Vibrio.
XX
RN [1]
RX PUBMED; 2832365.
RA Vimr E.R., Lawrisuk L., Galen J., Kaper J.B.;
RT "Cloning and expression of the Vibrio cholerae neuraminidase gene nanH in
RT Escherichia coli";
RL J. Bacteriol. 170(4):1495-1504(1988).
XX
RN [2]
RP 1-2601
RX PUBMED; 1730470.
RA Galen J.E., Ketley J.M., Fasano A., Richardson S.H., Wasserman S.S.,
RA Kaper J.B.;
RT "Role of Vibrio cholerae neuraminidase in the function of cholera toxin";
RL Infect. Immun. 60(2):406-415(1992).
XX
CC Nucleotides 160 - 339 were first reported in M19268. Reference: J.
CC Bacteriol. 170, 1495-1504 (1988).
XX
FH Key Location/Qualifiers
FH
FT source 1..2601
FT /organism="Vibrio cholerae"
FT /strain="395"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:666"
FT -35_signal 142..147
FT /gene="nanH"
FT -10_signal 166..171
FT /gene="nanH"
FT sig_peptide 208..279
FT /gene="nanH"
FT /citation=[1]
FT /experiment="experimental evidence, no additional details
FT recorded"
FT CDS 208..2553
FT /codon_start=1
FT /transl_table=11
FT /gene="nanH"
FT /standard_name="NANase"
FT /product="neuraminidase"
FT /function="converts higher order gangliosides to GM1"
FT /EC_number="3.2.1.18"
FT /note="putative"
FT /db_xref="GOA:A5F7A4"
FT /db_xref="InterPro:IPR008985"
FT /db_xref="InterPro:IPR011040"
FT /db_xref="InterPro:IPR013320"
FT /db_xref="InterPro:IPR015344"
FT /db_xref="UniProtKB/Swiss-Prot:A5F7A4"
FT /protein_id="AAA27546.1"
FT /translation="MRFKNVKKTALMLAMFGMATSSNAALFDYNATGDTEFDSPAKQGW
FT MQDNTNNGSGVLTNADGMPAWLVQGIGGRAQWTYSLSTNQHAQASSFGWRMTTEMKVLS
FT GGMITNYYANGTQRVLPIISLDSSGNLVVEFEGQTGRTVLATGTAATEYHKFELVFLPG
FT SNPSASFYFDGKLIRDNIQPTASKQNMIVWGNGSSNTDGVAAYRDIKFEIQGDVIFRGP
FT DRIPSIVASSVTPGVVTAFAEKRVGGGDPGALSNTNDIITRTSRDGGITWDTELNLTEQ
FT INVSDEFDFSDPRPIYDPSSNTVLVSYARWPTDAAQNGDRIKPWMPNGIFYSVYDVASG
FT NWQAPIDVTDQVKERSFQIAGWGGSELYRRNTSLNSQQDWQSNAKIRIVDGAANQIQVA
FT DGSRKYVVTLSIDESGGLVANLNGVSAPIILQSEHAKVHSFHDYELQYSALNHTTTLFV
FT DGQQITTWAGEVSQENNIQFGNADAQIDGRLHVQKIVLTQQGHNLVEFDAFYLAQQTPE
FT VEKDLEKLGWTKIKTGNTMSLYGNASVNPGPGHGITLTRQQNISGSQNGRLIYPAIVLD
FT RFFLNVMSIYSDDGGSNWQTGSTLPIPFRWKSSSILETLEPSEADMVELQNGDLLLTAR
FT LDFNQIVNGVNYSPRQQFLSKDGGITWSLLEANNANVFSNISTGTVDASITRFEQSDGS
FT HFLLFTNPQGNPAGTNGRQNLGLWFSFDEGVTWKGPIQLVNGASAYSDIYQLDSENAIV
FT IVETDNSNMRILRMPITLLKQKLTLSQN"
FT mat_peptide 280..2550
FT /gene="nanH"
FT /citation=[1]
FT /experiment="experimental evidence, no additional details
FT recorded"
XX
SQ Sequence 2601 BP; 780 A; 567 C; 587 G; 667 T; 0 other;
ttaaacaaca cacaaaaaca tttatggaaa ttattttttt tgcgatcgca gttcatgaag 60
aaaatatttt ttaatgagaa tctacaactg gaaatgtgaa cgtttccaag ccttacattc 120
gatggagact tgtcaatcaa gatgacttca caacgaagaa gagcatcgat tcacaaggaa 180
acagattcta atataaaggg agtagatatg cgtttcaaaa acgtaaagaa aaccgcttta 240
atgcttgcaa tgttcggtat ggcgacaagc tcaaacgccg cactttttga ctataacgca 300
acgggtgaca ctgagtttga cagtccagcc aaacagggat ggatgcaaga caacacgaat 360
aatggcagcg gcgttttaac caatgcagat ggaatgcccg cttggttggt gcaaggtatt 420
ggagggagag ctcaatggac atattctctc tctactaatc aacatgccca agcatcaagt 480
ttcggttggc gaatgacgac agaaatgaaa gtgctcagtg gtggaatgat cacaaactac 540
tacgccaacg gcactcagcg tgtcttaccc atcatttcat tagatagcag tggtaactta 600
gttgttgagt ttgaagggca aactggacgc accgttttgg caaccggcac agcagcaacg 660
gaatatcata aatttgaatt ggtattcctt cctggaagta acccatccgc tagcttttac 720
ttcgatggca aactcattcg tgacaacatc cagccgactg catcaaaaca aaatatgatc 780
gtatggggga atggctcatc aaatacggat ggtgtcgccg cttatcgtga tattaagttt 840
gaaattcaag gcgacgtcat cttcagaggc ccagaccgta taccgtccat tgtagcaagt 900
agcgtaacac caggggtggt aaccgcattt gcagagaaac gtgtgggggg aggagatccc 960
ggtgctctga gtaataccaa tgacataatc actcgtacct cacgagatgg cggtataact 1020
tgggataccg agctcaacct cactgagcaa atcaatgtca gtgatgagtt tgatttctcc 1080
gatcctcggc ctatctatga tccttcctcc aatacggttc ttgtctctta tgctcgatgg 1140
ccgaccgatg ccgctcaaaa cggagatcga ataaaaccat ggatgccaaa cggtattttt 1200
tacagcgtct atgatgttgc atcagggaac tggcaagcgc ctatcgatgt taccgatcag 1260
gtgaaagaac gcagtttcca aatcgctggt tggggtggtt cagagctgta tcgccgaaat 1320
accagcctaa atagccagca agactggcaa tcaaacgcta agatccgaat tgttgatggt 1380
gcagcgaacc agatacaagt tgccgatggt agccgaaaat atgttgtcac actgagtatt 1440
gatgaatcag gtggtctagt cgctaatcta aacggtgtta gtgctccgat tatcctgcaa 1500
tctgaacacg caaaggtaca ctctttccat gactacgaac ttcaatattc ggcgttaaac 1560
cacaccacaa cgttattcgt ggatggtcag caaatcacaa cttgggctgg cgaagtatcg 1620
caggagaaca acattcagtt tggtaatgcg gatgcccaaa ttgacggcag actgcatgtg 1680
caaaaaattg ttctcacaca gcaaggccat aacctcgtgg agtttgatgc tttctattta 1740
gcacagcaaa cccctgaagt agagaaagac cttgaaaagc ttggttggac aaaaattaaa 1800
acgggcaaca ccatgagttt gtatggaaat gccagtgtca acccaggacc gggtcatggc 1860
atcaccctta ctcgacaaca aaatatcagt ggcagccaaa acggccgctt gatctaccca 1920
gcgattgtgc ttgatcgttt cttcttgaac gtcatgtcta tttacagtga tgatggcggt 1980
tcaaactggc aaaccggttc aacactccct atcccctttc gctggaagag ttcgagtatc 2040
ctagaaactc tcgaacctag tgaagctgat atggttgaac tccaaaacgg tgatctactc 2100
cttactgcac gccttgattt taaccaaatc gttaatggtg tgaactatag cccacgccag 2160
caatttttga gtaaagatgg tggaatcacg tggagcctac ttgaggctaa caacgctaac 2220
gtctttagca atatcagtac tggtaccgtt gatgcttcta ttactcggtt cgagcaaagt 2280
gacggtagcc atttcttact ctttactaac ccacaaggaa accctgcggg gacaaatggc 2340
aggcaaaatc taggcttatg gtttagcttc gatgaagggg tgacatggaa aggaccaatt 2400
caacttgtta atggtgcatc ggcatattct gatatttatc aattggattc ggaaaatgcg 2460
attgtcattg ttgaaacgga taattcaaat atgcgaattc ttcgtatgcc tatcacattg 2520
ctaaaacaga agctgacctt atcgcaaaac taagagcagc ttaacgtgtt aaagctgata 2580
gcacatcaaa tgatgctatc a 2601
//
 |