BioSamples results for leukemia

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AccessionTitleSamplesDatabase
Comprehensive identification and characterization of the distribution of nucleosomes1ENA Sample Group Service Link
Comprehensive identification and characterization of the distribution of genomic DNAs1ENA Sample Group Service Link
GSE39787: Digital Restriction Enzyme Analysis of Methylation (DREAM) by Next-Generation Sequencing Provides Quantitative High-Resolution Maps of DNA Methylation13ENA Sample Group Service Link
Ultra-deep amplicon sequencing of BCR/ABL KD1ENA Sample Group Service Link
In-depth characterization of the microRNA transcriptome in a leukemia progression model2ENA Sample Group Service Link
GSE48059: Characterization of miRNomes in acute and chronic myeloid leukemia cells3
Transcription profiling of blasts from three APL patients expressing PML/RAR before and after treatment with 1 uM retinoic acid (RA) in vitro for four hours15ArrayExpress Sample Group Service Link
GSE47454: Transcriptome Sequencing (RNA-seq) of Ara-C Resistant Murine AML Cell Lines Identifies Mechanisms of Resistance4ArrayExpress Sample Group Service LinkENA Sample Group Service Link
AML-twins-PT_Leukemia13ENA Sample Group Service Link
Oral microbiome of leukemia patients26ENA Sample Group Service Link
Detecting and characterizing fusions and tandem duplications in acute myeloid leukemia transcriptome assemblies using Barnacle.2ENA Sample Group Service Link
Study of the cancer genome in T lymphoma showing a recurrent chromosome 12 translocation12ENA Sample Group Service Link
Acute depletion of Tet1-dependent 5-hydroxymethylcytosine levels impairs LIF/Stat3 signaling and results in loss of embryonic stem cell identity [MRE-seq]4ENA Sample Group Service Link
Oncofusion protein AML1-ETO targets ERG factor binding sites in AML42ENA Sample Group Service Link
Mouse Breast Cancer8ENA Sample Group Service Link
Genome-wide location analysis of WNT (Tcf7l2) and BMP (SMAD1) in human hematopoeitic cell lines co-occupied with lineage specific regulators (GATA1, GATA2, CEBPA)29ENA Sample Group Service Link
GSE52623: Role of SWI/SNF in acute leukemia maintenance and enhancer-mediated Myc regulation (RNA-seq)21ENA Sample Group Service Link
3 Homo sapiens samples from ENA SRA3ENA Sample Group Service Link
The histone demethylase KDM1A sustains the oncogenic potential of MLL-AF9 leukemia stem cells (ChIP-Seq data)9ENA Sample Group Service Link
DNA methylation by HELP for Integrative epigenomic study in leukemia samples28ArrayExpress Sample Group Service Link
TET2_IDH1_TALEN8ENA Sample Group Service Link
1 Homo sapiens samples from ENA SRA1ENA Sample Group Service Link
H3K79 methylation - cell cycle11ENA Sample Group Service Link
Chromatin Conformation Capture in two biological replicates of K562 cells to identify interactions between tRNA genes in human cells.2ENA Sample Group Service Link
GSE38483: Global DNA methylation study of trisomy 8 AML3ENA Sample Group Service Link
FAIRE-seq of the human megakaryocytic cell line CHRF-288-111ENA Sample Group Service Link
Integrated genomic analysis illustrates the central role of JAK-STAT pathway activation in myeloproliferative neoplasm pathogenesis [HEL cell lines]12ArrayExpress Sample Group Service Link
Inhibition of the LSD1 (KDM1A) demethylase reactivates the all-trans-retinoic acid differentiation pathway in acute myeloid leukemia [ChIP-Seq]10ENA Sample Group Service Link
GSE44420: BACH2 mediates negative selection and p53-dependent tumor suppression at the pre-B cell receptor checkpoint.3ENA Sample Group Service Link
Epigenetic profiling of WT and Ezh2-null MLL-AF9 murine leukemic cells4ENA Sample Group Service Link
GSE19235: Genomic targets of the KRAB and scan domain-containing zinc finger protein 263 (ZNF263).2ENA Sample Group Service Link
Identification of interleukin-4 (IL-4) targets in chronic lymphocytic leukemia (CLL)184ArrayExpress Sample Group Service Link
GSE32692: Cell-type specific and combinatorial usage of diverse transcription factors revealed by genome-wide binding studies in multiple human cells [new ChIP-Seq samples]26ENA Sample Group Service Link
Genome-wide Analysis Reveals Conserved and Divergent Features of Notch1/RBPJ Binding in Human and Murine T Lymphoblastic Leukemia Cells16ENA Sample Group Service Link
The tumor antigen PRAME is a substrate recognition subunit of a Cul2-based ubiquitin ligase and is associated with active NFY promoters5ENA Sample Group Service Link
Gene expression analyses of PR action in the uteri of SRC-2 mutant mice12ArrayExpress Sample Group Service Link
GSE45133: Breakpoint analysis of transcriptional and genomic profiles uncovers novel gene fusions spanning multiple human cancer types (RNA-seq)7ENA Sample Group Service Link
Ultra-Deep Sequencing of Feline Leukemia Virus Envelope Gene Variable Regions A/B7ENA Sample Group Service Link
The little elongation complex (LEC) regulates small nuclear RNA transcription18ENA Sample Group Service Link
High-throughput transcriptome sequencing of an AML-M2 patient in two stages: primary tumor and remission.2ENA Sample Group Service Link
Host RAW264.7 macrophage transcript profile following Brucella melitensis, B. neotomae, and B. ovis infections11ArrayExpress Sample Group Service Link
GSE43063: Genome wide mapping of histone 3 lysine 79 dimethylation in MLL rearranged and control human leukemia cell lines3ENA Sample Group Service Link
DNA sequencing of a cytogenetically normal acute myeloid leukaemia genome112ENA Sample Group Service LinkENA Sample Group Service LinkENA Sample Group Service LinkENA Sample Group Service LinkENA Sample Group Service LinkENA Sample Group Service LinkENA Sample Group Service LinkENA Sample Group Service LinkENA Sample Group Service LinkENA Sample Group Service LinkENA Sample Group Service LinkENA Sample Group Service LinkENA Sample Group Service LinkENA Sample Group Service LinkENA Sample Group Service LinkENA Sample Group Service LinkENA Sample Group Service LinkENA Sample Group Service LinkENA Sample Group Service LinkENA Sample Group Service LinkENA Sample Group Service LinkENA Sample Group Service LinkENA Sample Group Service LinkENA Sample Group Service LinkENA Sample Group Service LinkENA Sample Group Service LinkENA Sample Group Service LinkENA Sample Group Service LinkENA Sample Group Service LinkENA Sample Group Service LinkENA Sample Group Service LinkENA Sample Group Service 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Loss of imprinting at the CTCF binding sites in the DLK1-DIO3 domain reactivates microRNA expression in acute promyelocytic leukaemia47ArrayExpress Sample Group Service Link
RNA-sequencing analysis of NB4 cells overexpressing miR-125b4ENA Sample Group Service Link
GSE45377: Genome-wide mapping of Runx1-bound sites in early B-cell progenitors2ENA Sample Group Service Link
GSE38841: Selective Functions of Individual Zinc Fingers Within the DNA-Binding Domain of Ikaros (RNA-seq: BCR-ABL transformed in vitro cell culture cells)6ENA Sample Group Service Link
GSE42044: DNA methylation changes are a late event in Acute Promyelocytic Leukemia and coincide with loss of transcription factor binding51ENA Sample Group Service Link
GSE43725: The histone H2B ubiquitin ligase RNF20 is required for MLL-rearranged leukemia3ENA Sample Group Service Link
Mast Cell Leukemia Exome Sequencing2ENA Sample Group Service Link