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Models annotated by Taxonomy

 

Here are all the curated models which are annotated with Saccharomyces cerevisiae:


Model identifier Name Publication Id Last modified
BIOMD0000000370 Vinod2011_MitoticExit 21288956 08 Mar 2012 12:34:01 UTC
BIOMD0000000172 Pritchard2002_glycolysis 12180966 27 May 2014 22:33:43 UTC
BIOMD0000000380 Smallbone2011_TrehaloseBiosynthesis 21943906 16 May 2012 14:48:51 UTC
BIOMD0000000325 Palini2011_Minimal_2_Feedback_Model 21451590 29 Nov 2011 12:07:14 UTC
BIOMD0000000177 Conant2007_glycolysis_2C 17667951 16 May 2012 14:27:52 UTC
BIOMD0000000176 Conant2007_WGD_glycolysis_2A3AB 17667951 16 May 2012 14:25:08 UTC
BIOMD0000000253 Teusink1998_Glycolysis_TurboDesign 9612078 02 Dec 2010 22:45:30 UTC
BIOMD0000000032 Kofahl2004_PheromonePathway 15300679 04 Apr 2014 13:10:19 UTC
BIOMD0000000245 Lei2001_Yeast_Aerobic_Metabolism 11434967 03 Jun 2010 10:40:01 UTC
BIOMD0000000247 Ralser2007_Carbohydrate_Rerouting_ROS 18154684 14 Feb 2014 14:48:25 UTC
BIOMD0000000206 Wolf2000_Glycolytic_Oscillations 10692304 05 Jul 2012 14:48:43 UTC
BIOMD0000000056 Chen2004 - Cell Cycle Regulation 15169868 07 Jun 2013 10:59:38 UTC
BIOMD0000000063 Galazzo1990_FermentationPathwayKinetics 10.1016/0141-0229(90)90033-M 02 Apr 2014 00:54:05 UTC
BIOMD0000000061 Hynne2001_Glycolysis 11744196 03 Jun 2013 14:20:37 UTC
BIOMD0000000195 Tyson2001_Cell_Cycle_Regulation 11371178 05 Jul 2012 14:50:51 UTC
BIOMD0000000064 Teusink2000_Glycolysis 10951190 19 Jul 2012 18:26:07 UTC
BIOMD0000000076 Cronwright2002_Glycerol_Synthesis 12200299 16 May 2012 10:18:47 UTC
BIOMD0000000116 McClean2007_CrossTalk 17259986 05 Jul 2012 16:32:26 UTC
BIOMD0000000087 Proctor2006_telomere 17015293 05 Jul 2012 14:40:05 UTC
BIOMD0000000090 Wolf2001_Respiratory_Oscillations 11423122 05 Jul 2012 14:48:26 UTC
BIOMD0000000072 Yi2003_GproteinCycle 12960402 24 Feb 2015 20:25:59 UTC
BIOMD0000000150 Morris2002_CellCycle_CDK2Cyclin 11959850 01 Dec 2010 22:10:11 UTC
BIOMD0000000042 Nielsen1998_Glycolysis 17029704 26 Mar 2014 17:29:27 UTC
BIOMD0000000417 Ratushny2012_NF 22531117 11 Jul 2012 18:11:33 UTC
BIOMD0000000418 Ratushny2012_SPF 22531117 11 Jul 2012 18:12:54 UTC
BIOMD0000000419 Ratushny2012_SPF_I 22531117 11 Jul 2012 18:14:11 UTC
BIOMD0000000420 Ratushny2012_ASSURE_I 22531117 11 Jul 2012 18:15:28 UTC
BIOMD0000000421 Ratushny2012_ASSURE_II 22531117 03 Sep 2014 15:53:01 UTC
BIOMD0000000429 Schaber2012 - Hog pathway in yeast 23149687 14 Dec 2012 14:24:40 UTC
BIOMD0000000457 Firczuk2013 - Eukaryotic mRNA translation machinery 23340841 21 Jun 2013 11:28:41 UTC
BIOMD0000000502 Messiha2013 - Pentose phosphate pathway model 10.7287/peerj.preprints.146v2 28 Feb 2014 16:07:43 UTC
BIOMD0000000479 Croft2013 - GPCR-RGS interaction that compartmentalizes RGS activity 23900842 28 Apr 2014 16:04:49 UTC
BIOMD0000000478 Besozzi2012 - Oscillatory regimes in the Ras/cAMP/PKA pathway in S.cerevisiae 22818197 10 Mar 2014 15:38:27 UTC
BIOMD0000000237 Schaber2006_Pheromone_Starvation_Crosstalk 16884493 04 Apr 2014 13:46:07 UTC
BIOMD0000000254 Bier2000_GlycolyticOscillation 10692299 15 Sep 2010 13:18:14 UTC
BIOMD0000000266 Voit2003_Trehalose_Cycle 12782117 05 Jun 2013 15:47:45 UTC
BIOMD0000000409 Queralt2006_MitoticExit_Cdc55DownregulationBySeparase 16713564 16 Jul 2012 12:01:33 UTC
BIOMD0000000497 Stanford2013 - Kinetic model of yeast metabolic network (regulation) 24324546 04 Apr 2014 15:00:01 UTC
BIOMD0000000475 Amara2013 - PCNA ubiquitylation in the activation of PRR pathway 23514624 05 Mar 2014 16:56:10 UTC
BIOMD0000000547 Talemi2014 - Arsenic toxicity and detoxification mechanisms in yeast 24798644 10 Sep 2014 14:43:15 UTC
BIOMD0000000496 Stanford2013 - Kinetic model of yeast metabolic network (standard) 24324546 04 Apr 2014 14:57:22 UTC
BIOMD0000000503 Messiha2013 - combined glycolysis and pentose phosphate pathway model 10.7287/peerj.preprints.146v2 28 Feb 2014 16:06:13 UTC

Here are all the uncurated models which are annotated with Saccharomyces cerevisiae:


Model identifier Name Publication Id Last modified
MODEL0911120000 Sorokina2009_PhyA_FHL_ON_OFF_9h 19761615 27 Jul 2011 11:20:54 UTC
MODEL0913003363 Cui2006_CalciumHomeostasis 16445978 30 Apr 2009 12:00:23 UTC
MODEL1001200000 Smallbone2010_Genome_Scale_Yeast_Kinetics 20109182 13 Jun 2013 11:42:36 UTC
MODEL1004070001 Vaseghi1999_Pentose_PP_yeast 10935926 03 Feb 2012 11:10:46 UTC
MODEL1006230004 Chen2000_CellCycle 10637314 25 Jun 2010 12:06:06 UTC
MODEL1009220000 Martins2004_Yeast_Glycolysis_GlycerolSynthesis 10.2174/1389202043348643 03 Feb 2012 11:24:50 UTC
MODEL1011010000 Bruck2008_Glycolysis 19425118 03 Feb 2012 13:24:37 UTC
MODEL1012110001 Li2010_YeastGlycolysis 21114840 03 Feb 2012 11:20:55 UTC
MODEL1202270000 Lee2012_GeneExpression_BasicDecoyModel 22453733 11 May 2012 12:51:48 UTC
MODEL1202270001 Lee2012_GeneExpression_tTA-doxInteraction 22453733 11 May 2012 12:52:14 UTC
MODEL1204040000 Houser2012_pheromone_Ste12 22669614 30 Jul 2012 13:58:37 UTC
MODEL1204190000 Petelenz-kurdziel2013 - Osmo adaptation WT 23762021 25 Feb 2014 14:01:09 UTC
MODEL1204190001 Petelenz-kurdziel2013 - Osmo adaptation pfk2627D 23762021 25 Feb 2014 14:00:34 UTC
MODEL1204190002 Petelenz-kurdziel2013 - Osmo adaptation HOG1att 23762021 21 Feb 2014 16:55:39 UTC
MODEL1204190003 Petelenz-kurdziel2013 - Osmo adaptation hog1D 23762021 21 Feb 2014 16:56:16 UTC
MODEL1204190004 Petelenz-kurdzeil2013 - Osmo adaptation gpd1D 23762021 21 Feb 2014 16:58:12 UTC
MODEL1204190005 Petelenz-Kurdziel2013 - Osmo adaptation fps1D1 23762021 21 Feb 2014 16:59:01 UTC
MODEL1303060000 Ray2013 - Meiotic initiation in S. cerevisiae 23631506 12 Jun 2013 16:11:06 UTC
MODEL1303260000 Smallbone2013 - Glycolysis in S.cerevisiae - Iteration 00 23831062 25 Jun 2013 12:04:48 UTC
MODEL1303260001 Smallbone2013 - Glycolysis in S.cerevisiae - Iteration 01 23831062 25 Jun 2013 12:06:46 UTC
MODEL1303260002 Smallbone2013 - Glycolysis in S.cerevisiae - Iteration 02 23831062 25 Jun 2013 12:08:14 UTC
MODEL1303260003 Smallbone2013 - Glycolysis in S.cerevisiae - Iteration 03 23831062 25 Jun 2013 12:09:29 UTC
MODEL1303260004 Smallbone2013 - Glycolysis in S.cerevisiae - Iteration 04 23831062 25 Jun 2013 12:10:58 UTC
MODEL1303260005 Smallbone2013 - Glycolysis in S.cerevisiae - Iteration 05 23831062 25 Jun 2013 12:11:46 UTC
MODEL1303260006 Smallbone2013 - Glycolysis in S.cerevisiae - Iteration 06 23831062 25 Jun 2013 12:13:02 UTC
MODEL1303260007 Smallbone2013 - Glycolysis in S.cerevisiae - Iteration 07 23831062 25 Jun 2013 12:13:50 UTC
MODEL1303260008 Smallbone2013 - Glycolysis in S.cerevisiae - Iteration 08 23831062 25 Jun 2013 12:14:39 UTC
MODEL1303260009 Smallbone2013 - Glycolysis in S.cerevisiae - Iteration 09 23831062 25 Jun 2013 12:15:23 UTC
MODEL1303260010 Smallbone2013 - Glycolysis in S.cerevisiae - Iteration 10 23831062 25 Jun 2013 12:16:24 UTC
MODEL1303260011 Smallbone2013 - Glycolysis in S.cerevisiae - Iteration 11 23831062 25 Jun 2013 12:17:08 UTC
MODEL1303260012 Smallbone2013 - Glycolysis in S.cerevisiae - Iteration 12 23831062 25 Jun 2013 12:18:01 UTC
MODEL1303260013 Smallbone2013 - Glycolysis in S.cerevisiae - Iteration 13 23831062 25 Jun 2013 12:18:44 UTC
MODEL1303260014 Smallbone2013 - Glycolysis in S.cerevisiae - Iteration 14 23831062 25 Jun 2013 12:19:40 UTC
MODEL1303260015 Smallbone2013 - Glycolysis in S.cerevisiae - Iteration 15 23831062 25 Jun 2013 12:20:27 UTC
MODEL1303260016 Smallbone2013 - Glycolysis in S.cerevisiae - Iteration 16 23831062 25 Jun 2013 12:21:09 UTC
MODEL1303260017 Smallbone2013 - Glycolysis in S.cerevisiae - Iteration 17 23831062 25 Jun 2013 12:21:54 UTC
MODEL1303260018 Smallbone2013 - Glycolysis in S.cerevisiae - Iteration 18 23831062 25 Jun 2013 12:22:38 UTC
MODEL2426780967 Conant2007_glycolysis_2A 17667951 28 Sep 2010 10:04:03 UTC
MODEL2427021978 Conant2007_glycolysis_3A 17667951 28 Sep 2010 10:06:06 UTC
MODEL5952308332 Danø2006_Glycolysis_Reduction 17010168 23 Sep 2009 13:36:08 UTC
MODEL6624199343 Martins2001_glyoxalase 11453985 10 Sep 2008 11:40:19 UTC
MODEL7519354389 Zou2007_MAPK_SignalingNetworks 17977559 02 Jun 2009 11:33:23 UTC
MODEL8459127548 You2010_General_Yeast_mRNA_Translation 20306461 23 Mar 2010 23:49:09 UTC
MODEL0072364382 Herrgård2008_MetabolicNetwork_Yeast 18846089 03 Feb 2012 13:12:17 UTC
MODEL1002240000 Nookaew2008_Yeast_MetabolicNetwork_iIN800 18687109 03 Feb 2012 13:20:03 UTC
MODEL1008240001 Çakir2004 - Central Carbon Metabolism of S.cerevisiae 15083505 13 Jun 2013 11:09:14 UTC
MODEL1011020000 Kaizu2010_BuddingYeastCellCycle_Map 20865008 27 Jul 2011 14:04:31 UTC
MODEL1105180000 Smallbone2009 - FBA model-Geometric Perspective 19490860 13 Jun 2013 11:00:38 UTC
MODEL1107190000 Szappanos2011_GeneticInteractionNetwork_YeastMetabolism 21623372 17 Aug 2011 16:37:17 UTC
MODEL1201230000 Jol2012_YeastMetabolism_EFManalysis 22416224 26 Mar 2012 13:33:46 UTC
MODEL1209060000 Heavner2012 - Metabolic Network of S.cerevisiae 22663945 20 Nov 2012 13:48:13 UTC
MODEL1302010029 Pitkanen2014 - Metabolic reconstruction of Saccharomyces cerevisiae using CoReCo 24516375 02 Mar 2014 17:45:11 UTC
MODEL1303140001 Ray2013 - S.cerevisiae meiosis-specific metabolic network 23675502 20 May 2013 11:49:32 UTC
MODEL1403040000 Sackmann2006 - mating pheromone response pathway of S.cerevisiae 17081284 05 Mar 2014 17:22:19 UTC
MODEL3883569319 Aho2010_RefRec_S_cerevisiae 20498836 03 Feb 2012 19:08:56 UTC
MODEL1403250001 vanEunen2012 - Yeast Glycolysis (glucose upshift) 22570597 03 Sep 2014 16:09:55 UTC
MODEL1403250002 Rao2014 - Yeast glycolysis (reduced model) 24885656 03 Sep 2014 16:10:30 UTC

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