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BioModels Database

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Models annotated by Taxonomy

 

Here are all the curated models which are annotated with cellular organisms:


Model identifier Name Publication Id Last modified
BIOMD0000000405 Cookson2011_EnzymaticQueueingCoupling 22186735 06 Apr 2014 20:48:51 UTC
BIOMD0000000346 FitzHugh1961_NerveMembrane 19431309 20 Apr 2012 21:37:02 UTC
BIOMD0000000323 Kim2011_Oscillator_SimpleIII 21283141 20 Apr 2012 21:58:04 UTC
BIOMD0000000322 Kim2011_Oscillator_SimpleI 21283141 07 Jun 2013 15:14:22 UTC
BIOMD0000000306 Tyson2003_Activator_Inhibitor 12648679 06 Apr 2014 19:59:00 UTC
BIOMD0000000307 Tyson2003_Substrate_Depletion_Osc 12648679 06 Apr 2014 20:01:13 UTC
BIOMD0000000311 Tyson2003_Mutual_Activation 12648679 06 Apr 2014 20:07:09 UTC
BIOMD0000000312 Tyson2003_Perfect_Adaption 12648679 06 Apr 2014 20:08:40 UTC
BIOMD0000000310 Tyson2003_Mutual_Inhibition 12648679 06 Apr 2014 20:06:02 UTC
BIOMD0000000309 Tyson2003_NegFB_Homeostasis 12648679 06 Apr 2014 20:04:29 UTC
BIOMD0000000315 Montagne2011_Oligator_optimised 21283142 20 Apr 2012 21:59:26 UTC
BIOMD0000000319 Decroly1982_Enzymatic_Oscillator 6960354 09 Mar 2012 15:57:51 UTC
BIOMD0000000257 Piedrafita2010_MR_System 20700491 04 Apr 2014 17:44:16 UTC
BIOMD0000000035 Vilar2002_Oscillator 11972055 03 Jun 2013 13:58:11 UTC
BIOMD0000000180 Kim2007_CellularMemory_SymmetricModel 17892872 07 Apr 2014 00:33:55 UTC
BIOMD0000000179 Kim2007_CellularMemory_AsymmetricModel 17892872 07 Apr 2014 00:31:47 UTC
BIOMD0000000163 Zi2007_TGFbeta_signaling 17895977 05 Jul 2012 16:45:46 UTC
BIOMD0000000161 Eungdamrong2007_Ras_Activation 17098795 20 Mar 2014 17:03:47 UTC
BIOMD0000000145 Wang2007 - ATP induced intracellular Calcium Oscillation 17188305 31 Mar 2014 11:58:54 UTC
BIOMD0000000120 Chan2004_TCell_receptor_activation 15255048 05 Jul 2012 14:45:43 UTC
BIOMD0000000117 Dupont1991_CaOscillation 1647878 05 Jul 2012 16:48:14 UTC
BIOMD0000000085 Maurya2005_GTPaseCycle_reducedOrder 16986265 13 Feb 2014 15:47:02 UTC
BIOMD0000000098 Goldbeter1990_CalciumSpike_CICR 2304911 24 May 2014 17:41:51 UTC
BIOMD0000000101 Vilar2006_TGFbeta 16446785 05 Jul 2012 14:45:52 UTC
BIOMD0000000103 Legewie2006_apoptosis_NC 16978046 05 Jul 2012 14:46:07 UTC
BIOMD0000000113 Dupont1992_Ca_dpt_protein_phospho 1316185 06 Apr 2014 22:00:52 UTC
BIOMD0000000091 Proctor2005 - Actions of chaperones and their role in ageing 15610770 03 Jun 2014 20:38:41 UTC
BIOMD0000000108 Kowald2006_SOD 16085106 06 Apr 2014 23:54:04 UTC
BIOMD0000000086 Bornheimer2004_GTPaseCycle 15520372 05 Jul 2012 14:49:52 UTC
BIOMD0000000077 Blum2000_LHsecretion_1 10662710 06 Apr 2014 21:48:24 UTC
BIOMD0000000053 Ferreira2003_CML_generation2 12911334 05 Jul 2012 16:31:47 UTC
BIOMD0000000050 Martins2003_AmadoriDegradation 12873422 04 Apr 2014 12:28:30 UTC
BIOMD0000000052 Brands2002 - Monosaccharide-casein systems 12405768 04 Apr 2014 12:30:26 UTC
BIOMD0000000104 Klipp2002_MetabolicOptimization_linearPathway(n=2) 12423338 04 Apr 2014 15:25:43 UTC
BIOMD0000000040 Field1974_Oregonator 10.1063/1.1681288 04 Apr 2014 17:35:57 UTC
BIOMD0000000060 Keizer1996_Ryanodine_receptor_adaptation 8968617 06 Apr 2014 21:39:27 UTC
BIOMD0000000167 Mayya2005_STATmodule 17091582 27 May 2014 22:17:03 UTC
BIOMD0000000166 Zhu2007_TF_modulated_by_Calcium 17560007 27 May 2014 22:02:26 UTC
BIOMD0000000446 Erguler2013 - Unfolded protein stress response 23433609 20 May 2013 11:06:47 UTC
BIOMD0000000540 Yugi2014 - Insulin induced signalling (PFKL phosphorylation) - model 1 25131207 08 Sep 2014 14:05:40 UTC
BIOMD0000000539 François2005 - Mixed Feedback Loop (two-gene network) 16241483 11 Sep 2014 15:48:23 UTC
BIOMD0000000454 Smallbone2013 - Metabolic Control Analysis - Example 1 http://arxiv.org/pdf/1305.6449v1.pdf 06 Apr 2014 21:27:49 UTC
BIOMD0000000493 Schittler2010 - Cell fate of progenitor cells, osteoblasts or chondrocytes 21198133 26 Feb 2014 16:22:32 UTC
BIOMD0000000102 Legewie2006_apoptosis_WT 16978046 05 Mar 2014 16:59:25 UTC
BIOMD0000000100 Rozi2003_GlycogenPhosphorylase_Activation 14556891 24 May 2014 17:51:59 UTC
BIOMD0000000485 Cao2013 - Application of ABSIS method in the bistable Schlögl model 23862966 04 Apr 2014 16:05:23 UTC
BIOMD0000000484 Cao2013 - Application of ABSIS method in birth-death process 23862966 28 Apr 2014 15:57:32 UTC
BIOMD0000000483 Cao2008 - Network of a toggle switch 18373871 04 Apr 2014 15:49:20 UTC
BIOMD0000000453 Bidkhori2012 - EGFR signalling in NSCLC 23133538 28 Apr 2014 13:51:39 UTC
BIOMD0000000452 Bidkhori2012 - normal EGFR signalling 23133538 12 Mar 2014 23:08:24 UTC
BIOMD0000000443 Sarma2012 - Oscillations in MAPK cascade (S1n) 22694947 30 May 2014 17:50:13 UTC
BIOMD0000000456 Smallbone2013 - Metabolic Control Analysis - Example 3 http://arxiv.org/pdf/1305.6449v1.pdf 06 Apr 2014 21:30:05 UTC
BIOMD0000000455 Smallbone2013 - Metabolic Control Analysis - Example 2 http://arxiv.org/pdf/1305.6449v1.pdf 06 Apr 2014 21:29:03 UTC
BIOMD0000000233 Wilhelm2009_BistableReaction 19737387 20 Apr 2012 22:19:37 UTC
BIOMD0000000441 Sarma2012 - Oscillations in MAPK cascade (S2) 22694947 30 May 2014 17:44:00 UTC
BIOMD0000000442 Sarma2012 - Oscillations in MAPK cascade (S2), inclusion of external signalling module 22694947 30 May 2014 17:47:01 UTC
BIOMD0000000432 Sarma2012 - Interaction topologies of MAPK cascade (M4_K2_QSS_USEQ) 22748295 30 May 2014 18:21:03 UTC
BIOMD0000000440 Sarma2012 - Oscillations in MAPK cascade (S1) 22694947 30 May 2014 17:41:45 UTC
BIOMD0000000444 Sarma2012 - Oscillations in MAPK cascade (S2n) 22694947 30 May 2014 17:51:54 UTC
BIOMD0000000258 Ortega2006_bistability_doublePhosphorylation 16934033 20 Apr 2012 22:13:28 UTC
BIOMD0000000308 Tyson2003_NegFB_Oscillator 12648679 06 Apr 2014 20:03:14 UTC
BIOMD0000000541 Yugi2014 - Insulin induced signalling (PFKL phosphorylation) - model 2 25131207 08 Sep 2014 14:32:14 UTC
BIOMD0000000033 Brown2004_NGF_EGF_signaling 14525003 04 Apr 2014 13:21:52 UTC
BIOMD0000000092 Fuentes2005_ZymogenActivation 15634334 13 Feb 2014 15:45:09 UTC
BIOMD0000000202 ChenXF2008_CICR 18538916 27 May 2014 23:31:56 UTC
BIOMD0000000337 Pfeiffer2001_ATP-ProducingPathways_CooperationCompetition 11283355 20 Apr 2012 21:52:36 UTC
BIOMD0000000430 Sarma2012 - Interaction topologies of MAPK cascade (M4_K2_USEQ) 22748295 30 May 2014 18:19:49 UTC
BIOMD0000000431 Sarma2012 - Interaction topologies of MAPK cascade (M4_K2_PSEQ) 22748295 30 May 2014 18:20:24 UTC
BIOMD0000000433 Sarma2012 - Interaction topologies of MAPK cascade (M4_K2_QSS_PSEQ) 22748295 30 May 2014 18:21:39 UTC
BIOMD0000000438 Saeidi2012 - Quorum sensing device that produces GFP 10.1016/j.ces.2012.12.016 06 Jun 2013 11:55:21 UTC
BIOMD0000000543 Qi2013 - IL-6 and IFN crosstalk model (non-competitive) 23384097 09 Sep 2014 15:26:43 UTC

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