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BIOMD0000000579 - Sengupta2015 - Knowledge base model of human energy pool network (HEPNet)

 

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Reference Publication
Publication ID: 26053019
Sengupta A, Grover M, Chakraborty A, Saxena S.
HEPNet: A Knowledge Base Model of Human Energy Pool Network for Predicting the Energy Availability Status of an Individual.
PLoS ONE 2015; 10(6): e0127918
Amity Institute of Biotechnology, Amity University Uttar Pradesh, U.P., India.  [more]
Model
Original Model: HEPNET:Human Energy Pool N...
Submitter: Abhishek Sengupta
Submission ID: MODEL1507210000
Submission Date: 21 Jul 2015 17:52:50 UTC
Last Modification Date: 08 Apr 2016 18:17:35 UTC
Creation Date: 07 Aug 2015 15:27:05 UTC
Encoders:  Vijayalakshmi Chelliah
   Abhishek Sengupta
set #1
bqbiol:hasTaxon Taxonomy Homo sapiens
set #2
bqbiol:isVersionOf Gene Ontology generation of precursor metabolites and energy
set #3
bqbiol:hasProperty Mathematical Modelling Ontology MAMO_0000046
Notes
Sengupta2015 - Knowledge base model of human energy pool network (HEPNet)

This model is described in the article:

Sengupta A, Grover M, Chakraborty A, Saxena S.
PLoS ONE 2015; 10(6): e0127918

Abstract:

HEPNet is an electronic representation of metabolic reactions occurring within human cellular organization focusing on inflow and outflow of the energy currency ATP, GTP and other energy associated moieties. The backbone of HEPNet consists of primary bio-molecules such as carbohydrates, proteins and fats which ultimately constitute the chief source for the synthesis and obliteration of energy currencies in a cell. A series of biochemical pathways and reactions constituting the catabolism and anabolism of various metabolites are portrayed through cellular compartmentalization. The depicted pathways function synchronously toward an overarching goal of producing ATP and other energy associated moieties to bring into play a variety of cellular functions. HEPNet is manually curated with raw data from experiments and is also connected to KEGG and Reactome databases. This model has been validated by simulating it with physiological states like fasting, starvation, exercise and disease conditions like glycaemia, uremia and dihydrolipoamide dehydrogenase deficiency (DLDD). The results clearly indicate that ATP is the master regulator under different metabolic conditions and physiological states. The results also highlight that energy currencies play a minor role. However, the moiety creatine phosphate has a unique character, since it is a ready-made source of phosphoryl groups for the rapid synthesis of ATP from ADP. HEPNet provides a framework for further expanding the network diverse age groups of both the sexes, followed by the understanding of energetics in more complex metabolic pathways that are related to human disorders.

To the extent possible under law, all copyright and related or neighbouring rights to this encoded model have been dedicated to the public domain worldwide. Please refer to CC0 Public Domain Dedication for more information.

Model
Publication ID: 26053019 Submission Date: 21 Jul 2015 17:52:50 UTC Last Modification Date: 08 Apr 2016 18:17:35 UTC Creation Date: 07 Aug 2015 15:27:05 UTC
Mathematical expressions
Reactions
re99 re7 re8 re14
re37 re11 re12 re81
re85 re27 re36 re40
re38 re49 re68 re70
re71 re76 re63 re75
re67 re65 re61 re69
re59 re77 re82 re86
re90 re93 re1 re10
re9 re24 re13 re150
re151 re152 re153 re154
re155 re156 re157 re158
re100 re78 re104 re105
re106 re108 re107 re62
re58 re66 re5 re2
re101 re102 re103 re109
re60 re64 re72 re73
re74 re89 re25 re4
re3 re20 re21 re22
re33 re39 re6 re29
re31 re15 re23 re18
re19 re32 re26 re41
re28 re30 re35 re34
re42 re164 re168 re167
re166 re165 re159 re160
re161 re162 re163 re169
re170 re171 re172 re173
re43 re44 re45 re46
re47 re48 re53 re54
re55 re56 re57 re80
re79 re83 re84 re87
re88 re91 re92 re94
re95 re98 re50 re52
re51 re16 re17 re113
re116 re120 re123 re128
re131 re135 re138 re144
re97 re96 re147 re110
re117 re125 re124 re141
re132 re140 re139 re149
re148 re111 re114 re118
re121 re126 re129 re133
re136 re142 re145 re112
re115 re119 re122 re127
re130 re134 re137 re143
re146 re175 re182  
Physical entities
Compartments Species
default Xylulose5P Unbranched alpha(1,4)polymer UDP-galactose1phosphate uridylyl transferase
UDP-Glucose UDP glucose4epimerase UDP Glucose Phosphorylase
UDP Triokinase Triglyceride
Trehalose Trehalase Transketolase
Transaldolase Sucrose Sucrase
Sedoheptulase7P Ribose5P Pyruvate
Pi Phosphopentose isomerase Phosphohexo isomerase
Phosphogluco mutase PYRUVATE KINASE PYRUVATE CARBOXYLASE
PPi PHOSPHO TRIOSE ISOMERASE PGA MUTASE
PGA KINASE PEP CARBOXYKINASE PEP
OXALOACETATE NAPDH NADPH
NADP+ NADH NAD+
Mg2+ Limit Dextrin Lactose
Lactonase Lactate Hexokinase
H2O H20 H+
Glygogen Phosphorylase Glycosyl-4,6-Transferase Glycosyl transferase
Glycogen phosphorylase Glycogen Synthase Glycogen Primer
Glycogen Glycerol3P Glyceraldehyde
Glutamine Glutamate Glucose
Galactose1P Galactose Galactokinase
GTP GDP GA3P
G6PDehydrogenase G6P G3P DEHYDROGENASE
G1P G-6-P Phosphatase Fructose
Fructokinase FA F6P
F1P F1,6P F1,6BISPHOSPHATASE
Erythrose4P Epimerase ENOLASE
DHAP D-Ribulose5P CoA-SH
Carnitine_cyt CO2 C22 AcylCoA_cyt
C20 AcylCoA_cyt C18 AcylCoA_cyt C16 AcylCoA_cyt
C14 AcylCoA_cyt Amino acids Alpha1,6-Glycosidase
Alpha keto acid Alpha KG Aldolase
Alanine ATP ADP
6PGluconate dehydrogenase 6PGluconate 6PGDL
3-PGA 2NADH 2NAD+
2-PGA 1,3-BiPGA  
mitochondria cis-Aconitate car_mat UREA
Thiolase TPP Succinate dehydrogenase
Succinate S CoA synthase S CoA
Pi PYRUVATE DEHYDROGENASE PPi
Ornithine OAA NADH
NADH NAD+ Mg2+
Malate dehydrogenase Malate LIPOATE
Isocitrate dehydrogenase Isocitrate HMGCoA
HMG-CoA Synthase HCO3-+ NH4+ H2O
H+ Glutamine Glutaminase
Glutamate GDP Fumarate
Fumarase FeS FADH2
FAD Enoyl-CoA hydratase D-Beta-Hydroxybutyrate
D Betahydroxybutyrate dehydrogenase CoA-SH Co-Ash
Citrullyl AMP intermediate Citrulline Citrate Synthase
Citrate Carbamoyl phosphate synthetase I Carbamoyl phosphate
CO2 C8Acyl-CoA C8 L-3-hydroxyacyl-CoA
C8 Ketoacyl-CoA C8 2-trans-enoyl-CoA C6Acyl-CoA
C6 L-3-hydroxyacyl-CoA C6 Ketoacyl-CoA C6 2-trans-enoyl-CoA
C4Acyl-CoA C4 L-3-hydroxyacyl-CoA C4 Ketoacyl-CoA
C4 2-trans-enoyl-CoA C22car_ims C22Acyl-CoA
C22 L-3-hydroxyacyl-CoA C22 Ketoacyl-CoA C22 2-trans-enoyl-CoA
C20car_ims C20Acyl-CoA C20 L-3-hydroxyacyl-CoA
C20 Ketoacyl-CoA C20 2-trans-enoyl-CoA C18car_ims
C18Acyl-CoA C18 L-3-hydroxyacyl-CoA C18 Ketoacyl-CoA
C18 2-trans-enoyl-CoA C16car_ims C16Acyl-CoA
C16 L-3-hydroxyacyl-CoA C16 Ketoacyl-CoA C16 2-trans-enoyl-CoA
C14car_ims C14Acyl-CoA C14 L-3-hydroxyacyl-CoA
C14 Ketoacyl-CoA C14 2-trans-enoyl-CoA C12Acyl-CoA
C12 L-3-hydroxyacyl-CoA C12 Ketoacyl-CoA C12 2-trans-enoyl-CoA
C10Acyl-CoA C10 L-3-hydroxyacyl-CoA C10 Ketoacyl-CoA
C10 2-trans-enoyl-CoA Beta-hydroxyacyl-CoA dehydrogenase Beta-KetoacylCoA dehydrogenase
Aspartate aminotransferase Aspartate Arginosuccinate
Arginine Alpha-KG dehydrgenase complex Alpha-KG
Acyl-CoA dehydrogenase Aconitase AcetylCoA
Acetone AcetoacetylCoA Acetoacetate Decarboxylase
Acetoacetate ATP AMP
ADP A CoA 2H+
2ATP 2ADP 1/2O2
Creatine phosphate    
mit_inner_membrane QH2 Q FeS
FMN Cyb Cya-a3
CyC2 CyC CAC
2e    
IMS C22car_ims C20car_ims C18car_ims
C16car_ims C14car_ims 2H+
Creatine Kinase    
mit_outer_membrane Creatine    
Reactions (175)
 
 re99 [Pyruvate] → [Alanine];   {Pyruvate}
 
 re7 [Glutamine] → [HCO3-+ NH4+];   {Glutamine}
 
 re8 [Glutamate] → [HCO3-+ NH4+];   {Glutamate}
 
 re14 [Arginine] → [Ornithine];   {Arginine}
 
 re37 [F1,6P] ↔ [GA3P];   {F1,6P}
 
 re11 [Citrulline] + [ATP] → [Citrullyl AMP intermediate] + [ADP];   {Citrulline} , {ATP}
 
 re12 [Citrullyl AMP intermediate] + [Aspartate] + [ATP] → [Arginosuccinate] + [AMP] + [PPi];   {Citrullyl AMP intermediate} , {Aspartate} , {ATP}
 
 re81 [Glyceraldehyde] → [Glycerol3P];   {Glyceraldehyde}
 
 re85 [Lactate] + [NADH] → [Glucose] + [NAD+];   {Lactate} , {NADH}
 
 re27 [F6P] + [ATP] → [F1,6P] + [ADP];   {F6P} , {ATP}
 
 re36 [3-PGA] + [ATP] → [1,3-BiPGA] + [ADP];   {3-PGA} , {ATP}
 
 re40 [GA3P] + [Pi] + [NAD+] → [1,3-BiPGA] + [NADH] + [H+];   {GA3P} , {Pi} , {NAD+}
 
 re38 [F1,6P] ↔ [DHAP];   {F1,6P}
 
 re49 [UDP-Glucose] → [Glycogen Primer];   {UDP-Glucose}
 
 re68 [CyC] → [Cya-a3];   {CyC}
 
 re70 [1/2O2] → [Cya-a3];   {1/2O2}
 
 re71 [H2O] → [Cya-a3];   {H2O}
 
 re76 [2H+] → [Cya-a3];   {2H+}
 
 re63 [FeS] → [2e];   {FeS}
 
 re75 [2H+] → [2e];   {2H+}
 
 re67 [CyC2] → [CyC];   {CyC2}
 
 re65 [QH2] → [CyC2];   {QH2}
 
 re61 [QH2] → [Cyb];   {QH2}
 
 re69 [2H+] → [Q];   {2H+}
 
 re59 [FeS] + [FADH2] → [Q] + [FAD];   {FeS} , {FADH2}
 
 re77 [NADH] → [FMN];   {NADH}
 
 re82 [Glycerol3P] + [FA] → [Triglyceride];   {Glycerol3P} , {FA}
 
 re86 [Pyruvate] → [Lactate];   {Pyruvate}
 
 re90 [Lactose] → [Galactose] + [Glucose];   {Lactose}
 
 re93 [HMGCoA] → [Acetoacetate] + [A CoA];   {HMGCoA}
 
 re1 [Glutamine] → [Glutamine];   {Glutamine}
 
 re10 [Citrulline] → [Citrulline];   {Citrulline}
 
 re9 [Ornithine] + [Carbamoyl phosphate] → [Citrulline] + [Pi];   {Ornithine} , {Carbamoyl phosphate}
 
 re24 [Arginosuccinate] → [Arginine] + [Fumarate];   {Arginosuccinate}
 
 re13 [Arginine] + [H2O] → [Arginine] + [UREA];   {Arginine} , {H2O}
 
 re150 [C22 Ketoacyl-CoA] → [A CoA];   {C22 Ketoacyl-CoA}
 
 re151 [C20 Ketoacyl-CoA] → [A CoA];   {C20 Ketoacyl-CoA}
 
 re152 [C6 Ketoacyl-CoA] → [A CoA];   {C6 Ketoacyl-CoA}
 
 re153 [C18 Ketoacyl-CoA] → [A CoA];   {C18 Ketoacyl-CoA}
 
 re154 [C8 Ketoacyl-CoA] → [A CoA];   {C8 Ketoacyl-CoA}
 
 re155 [C10 Ketoacyl-CoA] → [A CoA];   {C10 Ketoacyl-CoA}
 
 re156 [C16 Ketoacyl-CoA] → [A CoA];   {C16 Ketoacyl-CoA}
 
 re157 [C14 Ketoacyl-CoA] → [A CoA];   {C14 Ketoacyl-CoA}
 
 re158 [C12 Ketoacyl-CoA] → [A CoA];   {C12 Ketoacyl-CoA}
 
 re100 [FADH2] → [FADH2];   {FADH2}
 
 re78 [FMN] → [NAD+];   {FMN}
 
 re104 [NAD+] → [NAD+];   {NAD+}
 
 re105 [NAD+] → [NAD+];   {NAD+}
 
 re106 [NAD+] → [NAD+];   {NAD+}
 
 re108 [NAD+] → [NAD+];   {NAD+}
 
 re107 [FAD] → [FAD];   {FAD}
 
 re62 [Cyb] → [FeS];   {Cyb}
 
 re58 [FMN] → [FeS];   {FMN}
 
 re66 [FeS] → [FeS];   {FeS}
 
 re5 [Alanine] + [Alpha KG] → [Glutamate] + [Alpha keto acid];   {Alanine} , {Alpha KG}
 
 re2 [Amino acids] + [Alpha keto acid] → [Glutamate] + [Alpha KG];   {Amino acids} , {Alpha keto acid}
 
 re101 [NADH] → [NADH];   {NADH}
 
 re102 [NADH] → [NADH];   {NADH}
 
 re103 [NADH] → [NADH];   {NADH}
 
 re109 [NADH] → [NADH];   {NADH}
 
 re60 [Q] → [QH2];   {Q}
 
 re64 [2e] → [QH2];   {2e}
 
 re72 [FMN] → [2H+];   {FMN}
 
 re73 [QH2] → [2H+];   {QH2}
 
 re74 [QH2] → [2H+];   {QH2}
 
 re89 [Galactose1P] + [2NAD+] → [UDP-Glucose] + [2NADH] + [H+];   {UDP glucose4epimerase} , {Galactose1P}
 
 re25 [Glucose] + [ATP] → [G6P] + [ADP];   {Hexokinase} , {Glucose}
 
 re4 [Glutamine] → [Glutamate];   {Glutaminase} , {Glutamine}
 
 re3 [Glutamate] + [OAA] → [Glutamate] + [Aspartate];   {Aspartate aminotransferase} , {Glutamate} , {OAA}
 
 re20 [Succinate] + [FAD] ↔ [Fumarate] + [FADH2];   {Succinate dehydrogenase} , {Succinate}
 
 re21 [Fumarate] + [H2O] ↔ [Malate];   {Fumarase} , {Fumarate}
 
 re22 [Malate] + [NAD+] ↔ [OAA] + [NADH] + [H+];   {Malate dehydrogenase} , {Malate}
 
 re33 [F1,6P] + [H2O] → [F6P] + [Pi];   {F1,6BISPHOSPHATASE} , {F1,6P}
 
 re39 [GA3P] ↔ [DHAP];   {PHOSPHO TRIOSE ISOMERASE} , {GA3P}
 
 re6 [HCO3-+ NH4+] + [2ATP] → [Carbamoyl phosphate] + [2ADP];   {Carbamoyl phosphate synthetase I} , {HCO3-+ NH4+}
 
 re29 [3-PGA] ↔ [2-PGA];   {PGA MUTASE} , {3-PGA}
 
 re31 [PEP] + [ADP] → [Pyruvate] + [ATP];   {PYRUVATE KINASE} , {PEP}
 
 re15 [A CoA] + [CO2] + [OAA] + [H2O] → [Citrate] + [CoA-SH];   {Citrate Synthase} , {A CoA}
 
 re23 [Isocitrate] + [NAD+] → [Alpha-KG] + [CO2] + [NADH] + [H+];   {Isocitrate dehydrogenase} , {Isocitrate}
 
 re18 [Alpha-KG] + [CoA-SH] + [NAD+] → [S CoA] + [CO2] + [NADH] + [H+];   {Alpha-KG dehydrgenase complex} , {Alpha-KG}
 
 re19 [S CoA] + [GDP] ↔ [Succinate] + [ATP] + [CoA-SH];   {S CoA synthase} , {S CoA}
 
 re32 [G6P] + [H20] → [Glucose] + [Pi];   {G-6-P Phosphatase} , {G6P}
 
 re26 [G6P] ↔ [F6P];   {Phosphohexo isomerase} , {G6P}
 
 re41 [1,3-BiPGA] + [NADH] + [H+] → [GA3P] + [Pi] + [NAD+];   {G3P DEHYDROGENASE} , {1,3-BiPGA}
 
 re28 [1,3-BiPGA] + [ADP] → [3-PGA] + [ATP];   {PGA KINASE} , {Mg2+} , {1,3-BiPGA}
 
 re30 [2-PGA] → [PEP];   {ENOLASE} , {2-PGA}
 
 re35 [OXALOACETATE] + [GDP] → [PEP] + [GTP];   {PEP CARBOXYKINASE} , {OXALOACETATE}
 
 re34 [Pyruvate] + [ATP] → [OXALOACETATE] + [ADP];   {PYRUVATE CARBOXYLASE} , {Pyruvate}
 
 re42 [Pyruvate] + [TPP] + [Co-Ash] + [NAD+] + [FAD] + [LIPOATE] → [A CoA] + [NADH] + [H+];   {PYRUVATE DEHYDROGENASE} , {Mg2+} , {Pyruvate}
 
 re164 [C22car_ims] → [C22car_ims];   {CAC} , {C22car_ims}
 
 re168 [C14car_ims] → [C14car_ims];   {CAC} , {C14car_ims}
 
 re167 [C16car_ims] → [C16car_ims];   {CAC} , {C16car_ims}
 
 re166 [C18car_ims] → [C18car_ims];   {CAC} , {C18car_ims}
 
 re165 [C20car_ims] → [C20car_ims];   {CAC} , {C20car_ims}
 
 re159 [C22 AcylCoA_cyt] + [Carnitine_cyt] → [C22car_ims] + [CoA-SH];   {Creatine} , {C22 AcylCoA_cyt} , {Carnitine_cyt}
 
 re160 [C20 AcylCoA_cyt] + [Carnitine_cyt] → [C20car_ims] + [CoA-SH];   {Creatine} , {C20 AcylCoA_cyt} , {Carnitine_cyt}
 
 re161 [C18 AcylCoA_cyt] + [Carnitine_cyt] → [C18car_ims] + [CoA-SH];   {Creatine} , {C18 AcylCoA_cyt} , {Carnitine_cyt}
 
 re162 [C16 AcylCoA_cyt] + [Carnitine_cyt] → [C16car_ims] + [CoA-SH];   {Creatine} , {C16 AcylCoA_cyt} , {Carnitine_cyt}
 
 re163 [C14 AcylCoA_cyt] + [Carnitine_cyt] → [C14car_ims] + [CoA-SH];   {Creatine} , {C14 AcylCoA_cyt} , {Carnitine_cyt}
 
 re169 [C22car_ims] → [C22Acyl-CoA] + [car_mat];   {Creatine phosphate} , {C22car_ims}
 
 re170 [C20car_ims] → [C20Acyl-CoA] + [car_mat];   {Creatine phosphate} , {C20car_ims}
 
 re171 [C18car_ims] → [C18Acyl-CoA] + [car_mat];   {Creatine phosphate} , {C18car_ims}
 
 re172 [C16car_ims] → [C16Acyl-CoA] + [car_mat];   {Creatine phosphate} , {C16car_ims}
 
 re173 [C14car_ims] → [C14Acyl-CoA] + [car_mat];   {Creatine phosphate} , {C14car_ims}
 
 re43 [G6P] + [NADP+] → [6PGDL] + [NADPH];   {G6PDehydrogenase} , {Mg2+} , {G6P}
 
 re44 [6PGDL] + [H2O] → [6PGluconate];   {Lactonase} , {Mg2+} , {6PGDL}
 
 re45 [6PGluconate] + [NADP+] → [D-Ribulose5P] + [NAPDH] + [H+] + [CO2];   {6PGluconate dehydrogenase} , {6PGluconate}
 
 re46 [D-Ribulose5P] ↔ [Ribose5P];   {Phosphopentose isomerase} , {D-Ribulose5P}
 
 re47 [Ribose5P] ↔ [Xylulose5P];   {Epimerase} , {Ribose5P}
 
 re48 [G1P] + [UDP] → [UDP-Glucose] + [PPi];   {UDP Glucose Phosphorylase} , {G1P}
 
 re53 [GA3P] + [Sedoheptulase7P] → [F6P] + [Erythrose4P];   {Transaldolase} , {GA3P}
 
 re54 [G6P] → [G1P];   {Phosphogluco mutase} , {G6P}
 
 re55 [Glycogen] → [G1P] + [Limit Dextrin];   {Glycogen phosphorylase} , {Glycogen}
 
 re56 [Limit Dextrin] → [Unbranched alpha(1,4)polymer] + [Glucose];   {Alpha1,6-Glycosidase} , {Limit Dextrin}
 
 re57 [Unbranched alpha(1,4)polymer] + [ATP] → [G1P] + [ADP];   {Glygogen Phosphorylase} , {Unbranched alpha(1,4)polymer}
 
 re80 [Sucrose] + [H2O] → [Glucose] + [Fructose];   {Sucrase} , {Sucrose}
 
 re79 [Fructose] + [ATP] → [F1P] + [ADP];   {Fructokinase} , {Fructose}
 
 re83 [F1P] → [DHAP] + [Glyceraldehyde];   {Aldolase} , {F1P}
 
 re84 [Glyceraldehyde] + [ATP] → [GA3P] + [ADP];   {Triokinase} , {Glyceraldehyde}
 
 re87 [Trehalose] + [H2O] → [Glucose];   {Trehalase} , {Trehalose}
 
 re88 [Galactose] + [ATP] → [Galactose1P] + [ADP];   {Galactokinase} , {Mg2+} , {Galactose}
 
 re91 [UDP-Glucose] → [G1P];   {UDP-galactose1phosphate uridylyl transferase} , {UDP-Glucose}
 
 re92 [AcetoacetylCoA] + [AcetylCoA] + [H2O] → [HMGCoA] + [CoA-SH];   {HMG-CoA Synthase} , {AcetoacetylCoA}
 
 re94 [Acetoacetate] → [Acetone] + [CO2];   {Acetoacetate Decarboxylase} , {Acetoacetate}
 
 re95 [Acetoacetate] + [NADH] + [H+] ↔ [D-Beta-Hydroxybutyrate] + [NAD+];   {D Betahydroxybutyrate dehydrogenase} , {Acetoacetate}
 
 re98 [Acetoacetate] + [S CoA] → [AcetoacetylCoA] + [Succinate];   {Beta-KetoacylCoA dehydrogenase} , {Acetoacetate}
 
 re50 [Glycogen Primer] → [Glycogen];   {Glycogen Synthase} , {Glycosyl transferase} , {Glycogen Synthase} , {Glycosyl-4,6-Transferase} , {Glycogen Primer}
 
 re52 [Xylulose5P] + [Erythrose4P] → [F6P] + [GA3P];   {Transketolase} , {Xylulose5P}
 
 re51 [Xylulose5P] + [Ribose5P] → [GA3P] + [Sedoheptulase7P];   {Transketolase} , {Xylulose5P}
 
 re16 [Citrate] ↔ [cis-Aconitate] + [H2O];   {Aconitase} , {Citrate}
 
 re17 [cis-Aconitate] + [H2O] ↔ [Isocitrate];   {Aconitase} , {cis-Aconitate}
 
 re113 [C22 Ketoacyl-CoA] + [CoA-SH] → [C20Acyl-CoA];   {Thiolase} , {C22 Ketoacyl-CoA}
 
 re116 [C20 Ketoacyl-CoA] + [CoA-SH] → [C18Acyl-CoA];   {Thiolase} , {C20 Ketoacyl-CoA}
 
 re120 [C18 Ketoacyl-CoA] + [CoA-SH] → [C16Acyl-CoA];   {Thiolase} , {C18 Ketoacyl-CoA}
 
 re123 [C16 Ketoacyl-CoA] + [CoA-SH] → [C14Acyl-CoA];   {Thiolase} , {C16 Ketoacyl-CoA}
 
 re128 [C14 Ketoacyl-CoA] + [CoA-SH] → [C12Acyl-CoA];   {Thiolase} , {C14 Ketoacyl-CoA}
 
 re131 [C12 Ketoacyl-CoA] + [CoA-SH] → [C10Acyl-CoA];   {Thiolase} , {C12 Ketoacyl-CoA}
 
 re135 [C10 Ketoacyl-CoA] + [CoA-SH] → [C8Acyl-CoA];   {Thiolase} , {C10 Ketoacyl-CoA}
 
 re138 [C8 Ketoacyl-CoA] + [CoA-SH] → [C6Acyl-CoA];   {Thiolase} , {C8 Ketoacyl-CoA}
 
 re144 [C6 Ketoacyl-CoA] + [CoA-SH] → [C4Acyl-CoA];   {Thiolase} , {C6 Ketoacyl-CoA}
 
 re97 [A CoA] → [AcetoacetylCoA] + [CoA-SH];   {Thiolase} , {A CoA}
 
 re96 [AcetoacetylCoA] + [CoA-SH] → [A CoA];   {Thiolase} , {AcetoacetylCoA}
 
 re147 [C4 Ketoacyl-CoA] + [CoA-SH] → [A CoA];   {Thiolase} , {C4 Ketoacyl-CoA}
 
 re110 [C22Acyl-CoA] + [FAD] → [C22 2-trans-enoyl-CoA] + [FADH2];   {Acyl-CoA dehydrogenase} , {C22Acyl-CoA}
 
 re117 [C20Acyl-CoA] + [FAD] → [C20 2-trans-enoyl-CoA] + [FADH2];   {Acyl-CoA dehydrogenase} , {C20Acyl-CoA}
 
 re125 [C18Acyl-CoA] + [FAD] → [C18 2-trans-enoyl-CoA] + [FADH2];   {Acyl-CoA dehydrogenase} , {C18Acyl-CoA}
 
 re124 [C16Acyl-CoA] + [FAD] → [C16 2-trans-enoyl-CoA] + [FADH2];   {Acyl-CoA dehydrogenase} , {C16Acyl-CoA}
 
 re141 [C14Acyl-CoA] + [FAD] → [C14 2-trans-enoyl-CoA] + [FADH2];   {Acyl-CoA dehydrogenase} , {C14Acyl-CoA}
 
 re132 [C12Acyl-CoA] + [FAD] → [C12 2-trans-enoyl-CoA] + [FADH2];   {Acyl-CoA dehydrogenase} , {C12Acyl-CoA}
 
 re140 [C10Acyl-CoA] + [FAD] → [C10 2-trans-enoyl-CoA] + [FADH2];   {Acyl-CoA dehydrogenase} , {C10Acyl-CoA}
 
 re139 [C8Acyl-CoA] + [FAD] → [C8 2-trans-enoyl-CoA] + [FADH2];   {Acyl-CoA dehydrogenase} , {C8Acyl-CoA}
 
 re149 [C6Acyl-CoA] + [FAD] → [C6 2-trans-enoyl-CoA] + [FADH2];   {Acyl-CoA dehydrogenase} , {C6Acyl-CoA}
 
 re148 [C4Acyl-CoA] + [FAD] → [C4 2-trans-enoyl-CoA] + [FADH2];   {Acyl-CoA dehydrogenase} , {C4Acyl-CoA}
 
 re111 [C22 2-trans-enoyl-CoA] + [H2O] → [C22 L-3-hydroxyacyl-CoA];   {Enoyl-CoA hydratase} , {C22 2-trans-enoyl-CoA}
 
 re114 [C20 2-trans-enoyl-CoA] + [H2O] → [C20 L-3-hydroxyacyl-CoA];   {Enoyl-CoA hydratase} , {C20 2-trans-enoyl-CoA}
 
 re118 [C18 2-trans-enoyl-CoA] + [H2O] → [C18 L-3-hydroxyacyl-CoA];   {Enoyl-CoA hydratase} , {C18 2-trans-enoyl-CoA}
 
 re121 [C16 2-trans-enoyl-CoA] + [H2O] → [C16 L-3-hydroxyacyl-CoA];   {Enoyl-CoA hydratase} , {C16 2-trans-enoyl-CoA}
 
 re126 [C14 2-trans-enoyl-CoA] + [H2O] → [C14 L-3-hydroxyacyl-CoA];   {Enoyl-CoA hydratase} , {C14 2-trans-enoyl-CoA}
 
 re129 [C12 2-trans-enoyl-CoA] + [H2O] → [C12 L-3-hydroxyacyl-CoA];   {Enoyl-CoA hydratase} , {C12 2-trans-enoyl-CoA}
 
 re133 [C10 2-trans-enoyl-CoA] + [H2O] → [C10 L-3-hydroxyacyl-CoA];   {Enoyl-CoA hydratase} , {C10 2-trans-enoyl-CoA}
 
 re136 [C8 2-trans-enoyl-CoA] + [H2O] → [C8 L-3-hydroxyacyl-CoA];   {Enoyl-CoA hydratase} , {C8 2-trans-enoyl-CoA}
 
 re142 [C6 2-trans-enoyl-CoA] + [H2O] → [C6 L-3-hydroxyacyl-CoA];   {Enoyl-CoA hydratase} , {C6 2-trans-enoyl-CoA}
 
 re145 [C4 2-trans-enoyl-CoA] + [H2O] → [C4 L-3-hydroxyacyl-CoA];   {Enoyl-CoA hydratase} , {C4 2-trans-enoyl-CoA}
 
 re112 [C22 L-3-hydroxyacyl-CoA] + [NAD+] → [C22 Ketoacyl-CoA] + [NADH] + [H+];   {Beta-hydroxyacyl-CoA dehydrogenase} , {C22 L-3-hydroxyacyl-CoA}
 
 re115 [C20 L-3-hydroxyacyl-CoA] + [NAD+] → [C20 Ketoacyl-CoA] + [NADH] + [H+];   {Beta-hydroxyacyl-CoA dehydrogenase} , {C20 L-3-hydroxyacyl-CoA}
 
 re119 [C18 L-3-hydroxyacyl-CoA] + [NAD+] → [C18 Ketoacyl-CoA] + [NADH] + [H+];   {Beta-hydroxyacyl-CoA dehydrogenase} , {C18 L-3-hydroxyacyl-CoA}
 
 re122 [C16 L-3-hydroxyacyl-CoA] + [NAD+] → [C16 Ketoacyl-CoA] + [NADH] + [H+];   {Beta-hydroxyacyl-CoA dehydrogenase} , {C16 L-3-hydroxyacyl-CoA}
 
 re127 [C14 L-3-hydroxyacyl-CoA] + [NAD+] → [C14 Ketoacyl-CoA] + [NADH] + [H+];   {Beta-hydroxyacyl-CoA dehydrogenase} , {C14 L-3-hydroxyacyl-CoA}
 
 re130 [C12 L-3-hydroxyacyl-CoA] + [NAD+] → [C12 Ketoacyl-CoA] + [NADH] + [H+];   {Beta-hydroxyacyl-CoA dehydrogenase} , {C12 L-3-hydroxyacyl-CoA}
 
 re134 [C10 L-3-hydroxyacyl-CoA] + [NAD+] → [C10 Ketoacyl-CoA] + [NADH] + [H+];   {Beta-hydroxyacyl-CoA dehydrogenase} , {C10 L-3-hydroxyacyl-CoA}
 
 re137 [C8 L-3-hydroxyacyl-CoA] + [NAD+] → [C8 Ketoacyl-CoA] + [NADH] + [H+];   {Beta-hydroxyacyl-CoA dehydrogenase} , {C8 L-3-hydroxyacyl-CoA}
 
 re143 [C6 L-3-hydroxyacyl-CoA] + [NAD+] → [C6 Ketoacyl-CoA] + [NADH] + [H+];   {Beta-hydroxyacyl-CoA dehydrogenase} , {C6 L-3-hydroxyacyl-CoA}
 
 re146 [C4 L-3-hydroxyacyl-CoA] + [NAD+] → [C4 Ketoacyl-CoA] + [NADH] + [H+];   {Beta-hydroxyacyl-CoA dehydrogenase} , {C4 L-3-hydroxyacyl-CoA}
 
 re175 [Creatine phosphate] + [ATP] → [Creatine];   {Creatine Kinase} , {Creatine phosphate}
 
 re182 [Creatine] → [Creatine phosphate] + [AMP];   {Creatine}
 
   Spatial dimensions: 3.0  Compartment size: 1.0  (Units: volume)
 
 Xylulose5P
Compartment: default
Initial concentration: 0.43
 
 Unbranched alpha(1,4)polymer
Compartment: default
Initial amount: 0.0
 
 UDP-galactose1phosphate uridylyl transferase
Compartment: default
Initial amount: 0.0
 
 UDP-Glucose
Compartment: default
Initial concentration: 155.0
 
 UDP glucose4epimerase
Compartment: default
Initial amount: 0.0
 
 UDP Glucose Phosphorylase
Compartment: default
Initial amount: 0.0
 
 UDP
Compartment: default
Initial concentration: 41.0
 
 Triokinase
Compartment: default
Initial amount: 0.0
 
 Triglyceride
Compartment: default
Initial concentration: 43.2
 
 Trehalose
Compartment: default
Initial concentration: 0.056
 
 Trehalase
Compartment: default
Initial amount: 0.0
 
 Transketolase
Compartment: default
Initial amount: 0.0
 
 Transaldolase
Compartment: default
Initial amount: 0.0
 
 Sucrose
Compartment: default
Initial concentration: 1.8
 
 Sucrase
Compartment: default
Initial amount: 0.0
 
 Sedoheptulase7P
Compartment: default
Initial concentration: 0.89
 
 Ribose5P
Compartment: default
Initial concentration: 13.2
 
 Pyruvate
Compartment: default
Initial concentration: 64.0
 
 Pi
Compartment: default
Initial concentration: 379.1
 
 Phosphopentose isomerase
Compartment: default
Initial amount: 0.0
 
 Phosphohexo isomerase
Compartment: default
Initial amount: 0.0
 
 Phosphogluco mutase
Compartment: default
Initial amount: 0.0
 
 PYRUVATE KINASE
Compartment: default
Initial amount: 0.0
 
 PYRUVATE CARBOXYLASE
Compartment: default
Initial amount: 0.0
 
 PPi
Compartment: default
Initial concentration: 1.8
 
 PHOSPHO TRIOSE ISOMERASE
Compartment: default
Initial amount: 0.0
 
 PGA MUTASE
Compartment: default
Initial amount: 0.0
 
 PGA KINASE
Compartment: default
Initial amount: 0.0
 
 PEP CARBOXYKINASE
Compartment: default
Initial amount: 0.0
 
 PEP
Compartment: default
Initial concentration: 17.4
 
 OXALOACETATE
Compartment: default
Initial concentration: 61.0
 
 NAPDH
Compartment: default
Initial concentration: 51.0
 
 NADPH
Compartment: default
Initial concentration: 51.0
 
 NADP+
Compartment: default
Initial amount: 0.0
 
 NADH
Compartment: default
Initial concentration: 22.0
 
 NAD+
Compartment: default
Initial concentration: 24.0
 
 Mg2+
Compartment: default
Initial concentration: 850.0
 
 Limit Dextrin
Compartment: default
Initial amount: 0.0
 
 Lactose
Compartment: default
Initial concentration: 1.45
 
 Lactonase
Compartment: default
Initial amount: 0.0
 
 Lactate
Compartment: default
Initial concentration: 740.0
 
 Hexokinase
Compartment: default
Initial amount: 0.0
 
 H2O
Compartment: default
Initial concentration: 5.5E7
 
 H20
Compartment: default
Initial concentration: 5.5E7
 
 H+
Compartment: default
Initial amount: 0.0
 
 Glygogen Phosphorylase
Compartment: default
Initial amount: 0.0
 
 Glycosyl-4,6-Transferase
Compartment: default
Initial amount: 0.0
 
 Glycosyl transferase
Compartment: default
Initial amount: 0.0
 
 Glycogen phosphorylase
Compartment: default
Initial amount: 0.0
 
 Glycogen Synthase
Compartment: default
Initial amount: 0.0
 
 Glycogen Primer
Compartment: default
Initial amount: 0.0
 
 Glycogen
Compartment: default
Initial concentration: 43.3
 
 Glycerol3P
Compartment: default
Initial concentration: 30.0
 
 Glyceraldehyde
Compartment: default
Initial concentration: 1476.0
 
 Glutamine
Compartment: default
Initial concentration: 586.0
 
 Glutamate
Compartment: default
Initial concentration: 7.9
 
 Glucose
Compartment: default
Initial concentration: 4440.0
 
 Galactose1P
Compartment: default
Initial concentration: 31.0
 
 Galactose
Compartment: default
Initial concentration: 88.3
 
 Galactokinase
Compartment: default
Initial amount: 0.0
 
 GTP
Compartment: default
Initial concentration: 56.0
 
 GDP
Compartment: default
Initial concentration: 15.0
 
 GA3P
Compartment: default
Initial concentration: 4.8
 
 G6PDehydrogenase
Compartment: default
Initial amount: 0.0
 
 G6P
Compartment: default
Initial concentration: 29.1
 
 G3P DEHYDROGENASE
Compartment: default
Initial amount: 0.0
 
 G1P
Compartment: default
Initial concentration: 5.0
 
 G-6-P Phosphatase
Compartment: default
Initial amount: 0.0
 
 Fructose
Compartment: default
Initial concentration: 31.0
 
 Fructokinase
Compartment: default
Initial amount: 0.0
 
 FA
Compartment: default
Initial amount: 0.0
 
 F6P
Compartment: default
Initial concentration: 10.2
 
 F1P
Compartment: default
Initial concentration: 0.17
 
 F1,6P
Compartment: default
Initial concentration: 1.2
 
 F1,6BISPHOSPHATASE
Compartment: default
Initial amount: 0.0
 
 Erythrose4P
Compartment: default
Initial concentration: 1770.0
 
 Epimerase
Compartment: default
Initial amount: 0.0
 
 ENOLASE
Compartment: default
Initial amount: 0.0
 
 DHAP
Compartment: default
Initial concentration: 15.6
 
 D-Ribulose5P
Compartment: default
Initial concentration: 1.58
 
 CoA-SH
Compartment: default
Initial concentration: 20.0
 
 Carnitine_cyt
Compartment: default
Initial concentration: 43.0
 
 CO2
Compartment: default
Initial concentration: 21600.0
 
 C22 AcylCoA_cyt
Compartment: default
Initial amount: 0.0
 
 C20 AcylCoA_cyt
Compartment: default
Initial amount: 0.0
 
 C18 AcylCoA_cyt
Compartment: default
Initial amount: 0.0
 
 C16 AcylCoA_cyt
Compartment: default
Initial amount: 0.0
 
 C14 AcylCoA_cyt
Compartment: default
Initial amount: 0.0
 
 Amino acids
Compartment: default
Initial amount: 0.0
 
 Alpha1,6-Glycosidase
Compartment: default
Initial amount: 0.0
 
 Alpha keto acid
Compartment: default
Initial amount: 0.0
 
 Alpha KG
Compartment: default
Initial concentration: 8.9
 
 Aldolase
Compartment: default
Initial amount: 0.0
 
 Alanine
Compartment: default
Initial concentration: 333.0
 
 ATP
Compartment: default
Initial concentration: 1390.0
 
 ADP
Compartment: default
Initial concentration: 160.0
 
 6PGluconate dehydrogenase
Compartment: default
Initial amount: 0.0
 
 6PGluconate
Compartment: default
Initial concentration: 2720.0
 
 6PGDL
Compartment: default
Initial concentration: 0.00762
 
 3-PGA
Compartment: default
Initial concentration: 47.2
 
 2NADH
Compartment: default
Initial concentration: 44.0
 
 2NAD+
Compartment: default
Initial concentration: 48.0
 
 2-PGA
Compartment: default
Initial concentration: 14.0
 
 1,3-BiPGA
Compartment: default
Initial concentration: 0.4
 
 mitochondria Spatial dimensions: 3.0  Compartment size: 1.0  (Units: volume)
 
 cis-Aconitate
Compartment: mitochondria
Initial concentration: 13.0
 
 car_mat
Compartment: mitochondria
Initial concentration: 43.0
 
 UREA
Compartment: mitochondria
Initial concentration: 6500.0
 
 Thiolase
Compartment: mitochondria
Initial amount: 0.0
 
 TPP
Compartment: mitochondria
Initial concentration: 0.0032
 
 Succinate dehydrogenase
Compartment: mitochondria
Initial amount: 0.0
 
 Succinate
Compartment: mitochondria
Initial amount: 0.0
 
 S CoA synthase
Compartment: mitochondria
Initial amount: 0.0
 
 S CoA
Compartment: mitochondria
Initial concentration: 20.0
 
 Pi
Compartment: mitochondria
Initial concentration: 379.1
 
 PYRUVATE DEHYDROGENASE
Compartment: mitochondria
Initial amount: 0.0
 
 PPi
Compartment: mitochondria
Initial concentration: 1.8
 
 Ornithine
Compartment: mitochondria
Initial concentration: 89.0
 
 OAA
Compartment: mitochondria
Initial concentration: 61.0
 
 NADH
Compartment: mitochondria
Initial concentration: 22.0
 
 NADH
Compartment: mitochondria
Initial concentration: 22.0
 
 NAD+
Compartment: mitochondria
Initial concentration: 24.0
 
 Mg2+
Compartment: mitochondria
Initial concentration: 850.0
 
 Malate dehydrogenase
Compartment: mitochondria
Initial amount: 0.0
 
 Malate
Compartment: mitochondria
Initial concentration: 3.2
 
 LIPOATE
Compartment: mitochondria
Initial concentration: 0.077
 
 Isocitrate dehydrogenase
Compartment: mitochondria
Initial amount: 0.0
 
 Isocitrate
Compartment: mitochondria
Initial concentration: 6.0
 
 HMGCoA
Compartment: mitochondria
Initial concentration: 0.25
 
 HMG-CoA Synthase
Compartment: mitochondria
Initial amount: 0.0
 
 HCO3-+ NH4+
Compartment: mitochondria
Initial concentration: 24900.0
 
 H2O
Compartment: mitochondria
Initial concentration: 5.5E7
 
 H+
Compartment: mitochondria
Initial amount: 0.0
 
 Glutamine
Compartment: mitochondria
Initial concentration: 586.0
 
 Glutaminase
Compartment: mitochondria
Initial amount: 0.0
 
 Glutamate
Compartment: mitochondria
Initial concentration: 7.9
 
 GDP
Compartment: mitochondria
Initial concentration: 15.0
 
 Fumarate
Compartment: mitochondria
Initial concentration: 1.5
 
 Fumarase
Compartment: mitochondria
Initial amount: 0.0
 
 FeS
Compartment: mitochondria
Initial amount: 0.0
 
 FADH2
Compartment: mitochondria
Initial amount: 0.0
 
 FAD
Compartment: mitochondria
Initial concentration: 0.075
 
 Enoyl-CoA hydratase
Compartment: mitochondria
Initial amount: 0.0
 
 D-Beta-Hydroxybutyrate
Compartment: mitochondria
Initial concentration: 36.0
 
 D Betahydroxybutyrate dehydrogenase
Compartment: mitochondria
Initial amount: 0.0
 
 CoA-SH
Compartment: mitochondria
Initial concentration: 20.0
 
 Co-Ash
Compartment: mitochondria
Initial concentration: 20.0
 
 Citrullyl AMP intermediate
Compartment: mitochondria
Initial amount: 0.0
 
 Citrulline
Compartment: mitochondria
Initial concentration: 38.0
 
 Citrate Synthase
Compartment: mitochondria
Initial amount: 0.0
 
 Citrate
Compartment: mitochondria
Initial concentration: 190.0
 
 Carbamoyl phosphate synthetase I
Compartment: mitochondria
Initial amount: 0.0
 
 Carbamoyl phosphate
Compartment: mitochondria
Initial amount: 0.0
 
 CO2
Compartment: mitochondria
Initial concentration: 21600.0
 
 C8Acyl-CoA
Compartment: mitochondria
Initial amount: 0.0
 
 C8 L-3-hydroxyacyl-CoA
Compartment: mitochondria
Initial amount: 0.0
 
 C8 Ketoacyl-CoA
Compartment: mitochondria
Initial amount: 0.0
 
 C8 2-trans-enoyl-CoA
Compartment: mitochondria
Initial amount: 0.0
 
 C6Acyl-CoA
Compartment: mitochondria
Initial amount: 0.0
 
 C6 L-3-hydroxyacyl-CoA
Compartment: mitochondria
Initial amount: 0.0
 
 C6 Ketoacyl-CoA
Compartment: mitochondria
Initial amount: 0.0
 
 C6 2-trans-enoyl-CoA
Compartment: mitochondria
Initial amount: 0.0
 
 C4Acyl-CoA
Compartment: mitochondria
Initial amount: 0.0
 
 C4 L-3-hydroxyacyl-CoA
Compartment: mitochondria
Initial amount: 0.0
 
 C4 Ketoacyl-CoA
Compartment: mitochondria
Initial amount: 0.0
 
 C4 2-trans-enoyl-CoA
Compartment: mitochondria
Initial amount: 0.0
 
 C22car_ims
Compartment: mitochondria
Initial amount: 0.0
 
 C22Acyl-CoA
Compartment: mitochondria
Initial amount: 0.0
 
 C22 L-3-hydroxyacyl-CoA
Compartment: mitochondria
Initial amount: 0.0
 
 C22 Ketoacyl-CoA
Compartment: mitochondria
Initial amount: 0.0
 
 C22 2-trans-enoyl-CoA
Compartment: mitochondria
Initial amount: 0.0
 
 C20car_ims
Compartment: mitochondria
Initial amount: 0.0
 
 C20Acyl-CoA
Compartment: mitochondria
Initial amount: 0.0
 
 C20 L-3-hydroxyacyl-CoA
Compartment: mitochondria
Initial amount: 0.0
 
 C20 Ketoacyl-CoA
Compartment: mitochondria
Initial amount: 0.0
 
 C20 2-trans-enoyl-CoA
Compartment: mitochondria
Initial amount: 0.0
 
 C18car_ims
Compartment: mitochondria
Initial amount: 0.0
 
 C18Acyl-CoA
Compartment: mitochondria
Initial amount: 0.0
 
 C18 L-3-hydroxyacyl-CoA
Compartment: mitochondria
Initial amount: 0.0
 
 C18 Ketoacyl-CoA
Compartment: mitochondria
Initial amount: 0.0
 
 C18 2-trans-enoyl-CoA
Compartment: mitochondria
Initial amount: 0.0
 
 C16car_ims
Compartment: mitochondria
Initial amount: 0.0
 
 C16Acyl-CoA
Compartment: mitochondria
Initial amount: 0.0
 
 C16 L-3-hydroxyacyl-CoA
Compartment: mitochondria
Initial amount: 0.0
 
 C16 Ketoacyl-CoA
Compartment: mitochondria
Initial amount: 0.0
 
 C16 2-trans-enoyl-CoA
Compartment: mitochondria
Initial amount: 0.0
 
 C14car_ims
Compartment: mitochondria
Initial amount: 0.0
 
 C14Acyl-CoA
Compartment: mitochondria
Initial amount: 0.0
 
 C14 L-3-hydroxyacyl-CoA
Compartment: mitochondria
Initial amount: 0.0
 
 C14 Ketoacyl-CoA
Compartment: mitochondria
Initial amount: 0.0
 
 C14 2-trans-enoyl-CoA
Compartment: mitochondria
Initial amount: 0.0
 
 C12Acyl-CoA
Compartment: mitochondria
Initial amount: 0.0
 
 C12 L-3-hydroxyacyl-CoA
Compartment: mitochondria
Initial amount: 0.0
 
 C12 Ketoacyl-CoA
Compartment: mitochondria
Initial amount: 0.0
 
 C12 2-trans-enoyl-CoA
Compartment: mitochondria
Initial amount: 0.0
 
 C10Acyl-CoA
Compartment: mitochondria
Initial amount: 0.0
 
 C10 L-3-hydroxyacyl-CoA
Compartment: mitochondria
Initial amount: 0.0
 
 C10 Ketoacyl-CoA
Compartment: mitochondria
Initial amount: 0.0
 
 C10 2-trans-enoyl-CoA
Compartment: mitochondria
Initial amount: 0.0
 
 Beta-hydroxyacyl-CoA dehydrogenase
Compartment: mitochondria
Initial amount: 0.0
 
 Beta-KetoacylCoA dehydrogenase
Compartment: mitochondria
Initial amount: 0.0
 
 Aspartate aminotransferase
Compartment: mitochondria
Initial amount: 0.0
 
 Aspartate
Compartment: mitochondria
Initial amount: 0.0
 
 Arginosuccinate
Compartment: mitochondria
Initial concentration: 0.0032
 
 Arginine
Compartment: mitochondria
Initial concentration: 99.0
 
 Alpha-KG dehydrgenase complex
Compartment: mitochondria
Initial amount: 0.0
 
 Alpha-KG
Compartment: mitochondria
Initial amount: 0.0
 
 Acyl-CoA dehydrogenase
Compartment: mitochondria
Initial amount: 0.0
 
 Aconitase
Compartment: mitochondria
Initial amount: 0.0
 
 AcetylCoA
Compartment: mitochondria
Initial amount: 0.0
 
 Acetone
Compartment: mitochondria
Initial concentration: 30.0
 
 AcetoacetylCoA
Compartment: mitochondria
Initial amount: 0.0
 
 Acetoacetate Decarboxylase
Compartment: mitochondria
Initial amount: 0.0
 
 Acetoacetate
Compartment: mitochondria
Initial concentration: 21.0
 
 ATP
Compartment: mitochondria
Initial concentration: 1390.0
 
 AMP
Compartment: mitochondria
Initial concentration: 51.0
 
 ADP
Compartment: mitochondria
Initial concentration: 160.0
 
 A CoA
Compartment: mitochondria
Initial amount: 0.0
 
 2H+
Compartment: mitochondria
Initial amount: 0.0
 
 2ATP
Compartment: mitochondria
Initial concentration: 2780.0
 
 2ADP
Compartment: mitochondria
Initial concentration: 320.0
 
 1/2O2
Compartment: mitochondria
Initial concentration: 3480.0
 
 Creatine phosphate
Compartment: mitochondria
Initial concentration: 33.0
 
 mit_inner_membrane Spatial dimensions: 3.0  Compartment size: 1.0  (Units: volume)
 
 QH2
Compartment: mit_inner_membrane
Initial concentration: 7.4
 
 Q
Compartment: mit_inner_membrane
Initial amount: 0.0
 
 FeS
Compartment: mit_inner_membrane
Initial amount: 0.0
 
 FMN
Compartment: mit_inner_membrane
Initial concentration: 0.0075
 
 Cyb
Compartment: mit_inner_membrane
Initial amount: 0.0
 
 Cya-a3
Compartment: mit_inner_membrane
Initial amount: 0.0
 
 CyC2
Compartment: mit_inner_membrane
Initial amount: 0.0
 
 CyC
Compartment: mit_inner_membrane
Initial amount: 0.0
 
 CAC
Compartment: mit_inner_membrane
Initial amount: 0.0
 
 2e
Compartment: mit_inner_membrane
Initial amount: 0.0
 
 IMS Spatial dimensions: 3.0  Compartment size: 1.0  (Units: volume)
 
 C22car_ims
Compartment: IMS
Initial amount: 0.0
 
 C20car_ims
Compartment: IMS
Initial amount: 0.0
 
 C18car_ims
Compartment: IMS
Initial amount: 0.0
 
 C16car_ims
Compartment: IMS
Initial amount: 0.0
 
 C14car_ims
Compartment: IMS
Initial amount: 0.0
 
 2H+
Compartment: IMS
Initial amount: 0.0
 
 Creatine Kinase
Compartment: IMS
Initial amount: 0.0
 
 mit_outer_membrane Spatial dimensions: 3.0  Compartment size: 1.0  (Units: volume)
 
 Creatine
Compartment: mit_outer_membrane
Initial concentration: 36.7
 
re99 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re7 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re8 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re14 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re37 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re11 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re12 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re81 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re85 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re27 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re36 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re40 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re38 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re49 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re68 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re70 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re71 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re76 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re63 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re75 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re67 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re65 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re61 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re69 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re59 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re77 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re82 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re86 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re90 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re93 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re1 (2)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
   k2
Value: 1.0   (Units: substance)
Constant
 
re10 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re9 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re24 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re13 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re150 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re151 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re152 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re153 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re154 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re155 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re156 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re157 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re158 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re100 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re78 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re104 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re105 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re106 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re108 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re107 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re62 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re58 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re66 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re5 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re2 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re101 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re102 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re103 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re109 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re60 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re64 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re72 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re73 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re74 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re89 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 0.069   (Units: substance)
Constant
 
re25 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 0.048   (Units: substance)
Constant
 
re4 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 0.04   (Units: substance)
Constant
 
re3 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re20 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 875.0   (Units: substance)
Constant
 
re21 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 0.013   (Units: substance)
Constant
 
re22 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 3.8E-4   (Units: substance)
Constant
 
re33 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 1.3   (Units: substance)
Constant
 
re39 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 13.6   (Units: substance)
Constant
 
re6 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 13.0   (Units: substance)
Constant
 
re29 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 0.1   (Units: substance)
Constant
 
re31 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 5.8   (Units: substance)
Constant
 
re15 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 0.11   (Units: substance)
Constant
 
re23 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 73.0   (Units: substance)
Constant
 
re18 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 490.0   (Units: substance)
Constant
 
re19 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 0.09   (Units: substance)
Constant
 
re32 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 2.0   (Units: substance)
Constant
 
re26 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 2.13E-4   (Units: substance)
Constant
 
re41 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 33.0   (Units: substance)
Constant
 
re28 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 300.0   (Units: substance)
Constant
 
re30 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 300.0   (Units: substance)
Constant
 
re35 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 791.0   (Units: substance)
Constant
 
re34 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 0.11   (Units: substance)
Constant
 
re42 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 40.0   (Units: substance)
Constant
 
re164 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re168 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re167 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re166 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re165 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re159 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re160 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re161 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re162 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re163 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re169 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re170 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re171 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re172 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re173 (1)
 
   k1
Value: 1.0   (Units: substance)
Constant
 
re43 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 0.04   (Units: substance)
Constant
 
re44 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 18.2   (Units: substance)
Constant
 
re45 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 0.157   (Units: substance)
Constant
 
re46 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 13.6   (Units: substance)
Constant
 
re47 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 140.0   (Units: substance)
Constant
 
re48 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 0.066   (Units: substance)
Constant
 
re53 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 0.13   (Units: substance)
Constant
 
re54 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 0.045   (Units: substance)
Constant
 
re55 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 0.1   (Units: substance)
Constant
 
re56 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 0.08   (Units: substance)
Constant
 
re57 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 0.1   (Units: substance)
Constant
 
re80 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 10.0   (Units: substance)
Constant
 
re79 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 0.58   (Units: substance)
Constant
 
re83 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 1.7   (Units: substance)
Constant
 
re84 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 0.31   (Units: substance)
Constant
 
re87 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 1.37   (Units: substance)
Constant
 
re88 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 970.0   (Units: substance)
Constant
 
re91 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 0.13   (Units: substance)
Constant
 
re92 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 294.0   (Units: substance)
Constant
 
re94 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 1.28   (Units: substance)
Constant
 
re95 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 12.6   (Units: substance)
Constant
 
re98 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 18.7   (Units: substance)
Constant
 
re50 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 0.08   (Units: substance)
Constant
 
re52 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 0.19   (Units: substance)
Constant
 
re51 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 0.19   (Units: substance)
Constant
 
re16 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 2900.0   (Units: substance)
Constant
 
re17 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 2900.0   (Units: substance)
Constant
 
re113 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 16.0   (Units: substance)
Constant
 
re116 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 16.0   (Units: substance)
Constant
 
re120 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 16.0   (Units: substance)
Constant
 
re123 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 16.0   (Units: substance)
Constant
 
re128 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 34.5   (Units: substance)
Constant
 
re131 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 16.0   (Units: substance)
Constant
 
re135 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 16.0   (Units: substance)
Constant
 
re138 (4)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 16.0   (Units: substance)
Constant
 
   v2
Value: 1.0   (Units: substance)
Constant
 
   k2
Value: 16.0   (Units: substance)
Constant
 
re144 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 16.0   (Units: substance)
Constant
 
re97 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 16.0   (Units: substance)
Constant
 
re96 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 100.0   (Units: substance)
Constant
 
re147 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 16.0   (Units: substance)
Constant
 
re110 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 3.0   (Units: substance)
Constant
 
re117 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 3.0   (Units: substance)
Constant
 
re125 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 3.0   (Units: substance)
Constant
 
re124 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 3.0   (Units: substance)
Constant
 
re141 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 3.0   (Units: substance)
Constant
 
re132 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 3.0   (Units: substance)
Constant
 
re140 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 3.0   (Units: substance)
Constant
 
re139 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 3.0   (Units: substance)
Constant
 
re149 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 3.0   (Units: substance)
Constant
 
re148 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 3.0   (Units: substance)
Constant
 
re111 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 100.0   (Units: substance)
Constant
 
re114 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 100.0   (Units: substance)
Constant
 
re118 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 100.0   (Units: substance)
Constant
 
re121 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 100.0   (Units: substance)
Constant
 
re126 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 100.0   (Units: substance)
Constant
 
re129 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 100.0   (Units: substance)
Constant
 
re133 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 100.0   (Units: substance)
Constant
 
re136 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 100.0   (Units: substance)
Constant
 
re142 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 100.0   (Units: substance)
Constant
 
re145 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 100.0   (Units: substance)
Constant
 
re112 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 34.5   (Units: substance)
Constant
 
re115 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 34.5   (Units: substance)
Constant
 
re119 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 34.5   (Units: substance)
Constant
 
re122 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 34.5   (Units: substance)
Constant
 
re127 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 34.5   (Units: substance)
Constant
 
re130 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 34.5   (Units: substance)
Constant
 
re134 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 34.5   (Units: substance)
Constant
 
re137 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 34.5   (Units: substance)
Constant
 
re143 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 34.5   (Units: substance)
Constant
 
re146 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 34.5   (Units: substance)
Constant
 
re175 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 1.16   (Units: substance)
Constant
 
re182 (2)
 
   v1
Value: 1.0   (Units: substance)
Constant
 
   k1
Value: 9.6   (Units: substance)
Constant
 
Representative curation result(s)
Representative curation result(s) of BIOMD0000000579

Curator's comment: (updated: 07 Aug 2015 16:25:48 BST)

Figure 5A of the reference publication has been reproduced using SBML odeSolver.

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