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Cdc13_Cdc2 creation |
→ [Cdc13_Cdc2]; |
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Math: |
(Details: ) |
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Cig2_Cdc2 creation |
→ [Cig2_Cdc2]; |
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Math: |
(Details: ) |
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Cdc2 phosphorylation |
[Cdc13_Cdc2] ↔ [Cdc13_P-Cdc2];
{Wee1} , {Cdc25}
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Math: |
(Details: ) |
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Annotations: |
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binding of Rum1 with Cdc13_Cdc2 |
[Cdc13_Cdc2] + [FreeRum1] ↔ [Cdc13_Cdc2_Rum1]; |
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Math: |
(Details: ) |
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Annotations: |
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binding of Rum1 with Cdc13_P-Cdc2 |
[Cdc13_P-Cdc2] + [FreeRum1] ↔ [Cdc13_P-Cdc2_Rum1]; |
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Math: |
(Details: ) |
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Annotations: |
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Rum1 degradation in Rum1_Cdc13_Cdc2 |
[Cdc13_Cdc2_Rum1] → [Cdc13_Cdc2]; |
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Math: |
(Details: ) |
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Annotations: |
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Rum1 degradation in solution |
[FreeRum1] → ; |
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Math: |
(Details: ) |
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Annotations: |
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Rum1 degradation in Rum1_Cdc13_P-Cdc2 |
[Cdc13_P-Cdc2_Rum1] → [Cdc13_P-Cdc2]; |
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Math: |
(Details: ) |
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Annotations: |
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Rum1 degradation in Rum1_Cig2_Cdc2 |
[Cig2_Cdc2_Rum1] → [Cig2_Cdc2]; |
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Math: |
(Details: ) |
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Annotations: |
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Cdc13 degradation in Cdc13_Cdc2 |
[Cdc13_Cdc2] → ;
{ubiquitinProtease1}
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Math: |
(Details: ) |
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Annotations: |
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Cdc13 degradation in Cdc13_P-Cdc2 |
[Cdc13_P-Cdc2] → ;
{ubiquitinProtease1}
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Math: |
(Details: ) |
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Annotations: |
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Cig2 degradation in Cig2_Cdc2 |
[Cig2_Cdc2] → ;
{ubiquitinProtease2}
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Math: |
(Details: ) |
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Annotations: |
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Cdc13 degradation in Rum1_Cdc13_P-Cdc2 |
[Cdc13_P-Cdc2_Rum1] → [FreeRum1]; |
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Math: |
(Details: ) |
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Annotations: |
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Cdc13 degradation in Rum1_Cdc13_Cdc2 |
[Cdc13_Cdc2_Rum1] → [FreeRum1]; |
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Math: |
(Details: ) |
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Annotations: |
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Cig2 degradation in Rum1_Cig2_Cdc2 |
[Cig2_Cdc2_Rum1] → [FreeRum1]; |
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Math: |
(Details: ) |
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Annotations: |
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Binding of Rum1 to Cig2_Cdc2 |
[Cig2_Cdc2] + [FreeRum1] ↔ [Cig2_Cdc2_Rum1]; |
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Math: |
(Details: ) |
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Annotations: |
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UbE mediated degradation of Cdc13_Cdc2 in Rum1_Cdc13_Cdc2 |
[Cdc13_Cdc2_Rum1] → [FreeRum1];
{ubiquitinProtease1}
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Math: |
(Details: ) |
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Annotations: |
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UbE mediated degradation of Cdc13_Cdc2 in Rum1_Cdc13_P-Cdc2 |
[Cdc13_P-Cdc2_Rum1] → [FreeRum1];
{ubiquitinProtease1}
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Math: |
(Details: ) |
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Annotations: |
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Rum1 creation |
→ [FreeRum1]; |
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Math: |
(Details: ) |
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Rum1 degradation by SPF |
[FreeRum1] → ;
{S-phasePromotingFactor}
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Math: |
(Details: ) |
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Annotations: |
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IE production & degradation |
[BoundIntermediaryEnzyme] ↔ [IntermediaryEnzyme];
{M-phasePromotingFactor}
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Math: |
(Details: ) |
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UbE production & degradation |
[BoundUbiquitinProtease1] ↔ [ubiquitinProtease1];
{IntermediaryEnzyme}
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Math: |
(Details: ) |
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UbE2 production & degradation |
[BoundUbiquitinProtease2] ↔ [ubiquitinProtease2];
{M-phasePromotingFactor}
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Math: |
(Details: ) |
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Wee1 production & degradation |
[BoundWee1] ↔ [Wee1];
{M-phasePromotingFactor}
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Math: |
(Details: ) |
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Cdc25 production & degradation |
[BoundCdc25] ↔ [Cdc25];
{M-phasePromotingFactor}
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Math: |
(Details: ) |
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Rate Rule |
d [
Mass] / d t= Mass * mu |
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Math: |
(Details: ) |
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Assignment Rule |
BoundIntermediaryEnzyme = 1 - IE |
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Math: |
(Details: ) |
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Assignment Rule |
BoundUbiquitinProtease1 = 1 - UbE |
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Math: |
(Details: ) |
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Assignment Rule |
BoundUbiquitinProtease2 = 1 - UbE2 |
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Math: |
(Details: ) |
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Assignment Rule |
BoundWee1 = 1 - Wee1 |
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Math: |
(Details: ) |
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Assignment Rule |
BoundCdc25 = 1 - Cdc25 |
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Math: |
(Details: ) |
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Assignment Rule |
TotalRum1 = G1R + G2R + PG2R + R |
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Math: |
(Details: ) |
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Assignment Rule |
TotalCdc13 = G2K + G2R + PG2 + PG2R |
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Math: |
(Details: ) |
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Assignment Rule |
TotalCig2 = G1K + G1R |
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Math: |
(Details: ) |
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Assignment Rule |
k2 = UbE * V2 + (1 - UbE) * V2prime |
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Math: |
(Details: ) |
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Assignment Rule |
k6 = UbE2 * V6 + (1 - UbE2) * V6prime |
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Math: |
(Details: ) |
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Assignment Rule |
kwee = Vwprime * (1 - Wee1) + Vw * Wee1 |
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Math: |
(Details: ) |
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Assignment Rule |
k25 = Cdc25 * V25 + (1 - Cdc25) * V25prime |
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Math: |
(Details: ) |
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Assignment Rule |
M-phasePromotingFactor = G2K + beta * PG2 |
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Math: |
(Details: ) |
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Assignment Rule |
S-phasePromotingFactor = Cig1 + alpha * G1K + MPF |
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Math: |
(Details: ) |
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S-Phase Start |
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Trigger: |
geq(SPF, 0.1) |
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Delay: |
60 |
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Annotations: |
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Cell Division |
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Trigger: |
leq(UbE, 0.1) |
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Annotations: |
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