Alternative Transcript Diversity Database

ATD Database - Access

Access to the ATD database can be obtained via web interfaces. We are in a constant process of refining the interfaces and adding further functionalities.

Human	ATD release 2 is now available : Based on the Ensembl 36.35i gene data for human. The ATD release 1 (Ensembl 27.35a.1) is still accessible.
Mouse	ATD release 2 is now available : Based on the Ensembl 37.34e gene data for mouse. The ATD release 1 (Ensembl 27.33c.1) is still accessible.

ATD Database - Download

Human ATD Release 2	of our AltTrans production pipeline is now available (based on Ensembl 36.35i ). (December 2005)
Mouse ATD Release 2	of our AltTrans production pipeline is now available (Ensembl 37.34e). (February 2006)

Previous releases :

Human ATD Release 1	of our AltTrans production pipeline is based on Ensembl 27.35a.1. (May 2005)
Mouse ATD Release 1	of our AltTrans production pipeline is based on Ensembl 27.33c.1. (May 2005)

When citing ATD or AltTrans please use:

Le Texier, V., Riethoven, J-J., Kumanduri, V., Gopalakrishnan, C., Lopez, F., Gautheret, D. and Thanaraj, T.A. (2006)
AltTrans: Transcript pattern variants annotated for both alternative splicing and alternative polyadenylation.
BMC Bioinformatics 7: 169 (2006).
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