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ALTERNATIVE SPLICING
 
   
 ASD  Alternative Exon Database


Submission page for AEDB entry.

Fill-in the following the form


Please select an unique internal number :

Please select the submitter name:

If not in the list, enter name here:



Please select the species from this list:

If not in the list enter 2 abbreviation letters then "-" and the species description.(eg:specie1-description1)



Please enter the type of splicing mechanism:

If you are entering a mutually exclusive exon, please indicate the number of the excluded exon


Please enter the tissue(s) in which the exon is expressed. You can select multiple entries by clicking on multiple entries.

Some browsers might require - press CTRL while clicking; some browsers might require - press SHIFT + CTRL while clicking.

If not in the list enter 2 abbreviation letters then "-" and the tissue description. If several tissues use as a comma seperated string (eg:T1-tissue1,T2-tissue2).



Please indicate whether the usage of the alternative exon is regulated during development

If the exon is regulated during development, please specify the expression(e.g. expression starts at embryonic day E16


What technique was used to determine the alternative splicing event?

If not in the list, enter the technique used here:



Please give the Genbank/RefSeq accession number (if there are more than one accession numbers, separate them by comma)

Or select the value unknown :

Please give the Ensembl accession number (if there are more than one accession numbers, separate them by comma)

Or select the value unknown :



Please indicate from which type of sequence the alternative exon sequence was deduced



Please indicate whether the tissue specific expression of alternative exons is similar(follows) or different to the general regulation of the gene



Is the usage/regulation of the exon associated with any known disease



Give a name of the gene and indicate the exon number, if known, e.g.gene XYZ, exon 5



Please indicate the publication describing the alternative exon

Indicate the pubmed unique identifier (if there are more than one pubmed numbers, separate them by comma)

Or select the value unknown :



Please indicate the expression pattern of the alternative exon, if its known



Does the alternative exon encode any of these regulatory features

If not in the list, enter here

Does the exon have any other regulatory/biological features



Sequence information of the alternative spliced exon


enter 12 nucleotides of the downstream intron
Enter the sequence of the alternatively spliced exon
Indicate the reading frame
6 nucleotides of the upstream intron


Sequence information of the constitutive exons flanking the alternative exon


Enter the sequence of the 5' constitutive exon
Indicate the reading frame
Indicate the 5' score
Enter the sequence of the 3' constitutive exon
Indicate the reading frame
Indicate the 3' score


Indicate the keywords annotation (if there are more than one keywords, separate them by comma)

Indicate any comments you might have






 



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