P-GSE49614-1 - P-GSE49614-1
normalization data transformation protocol
Genotyping data were generated using Genome Studio v2010.3 with Genotyping module v1.8.4 and GenCall v6.3.0 with score Cutoff 0.15. *replicates were used as quality controls and exluded from the main analysis after normalization and quality check. The unique lymph node metastasis was also excluded from the main analysis, being this limited to primary tumors. ID_REF = VALUE = Genotype: AA, AB, BB, NC (no call), NaN (IntensityOnly).