P-GSE40140-1 - P-GSE40140-1

Type
normalization data transformation protocol
Description
The images were then converted to scaled Log2-ratio of the probes for peak finding analysis according to the genomic position in NimbleScan software (NimbleGen). Peaks of enriched DNA fragments were identified and mapped to promoters in the Arabidopsis genome using the default setting in the NimbleScan software (NimbleGen) according to the manufacturer’s description. ID_REF = VALUE = Scaled Tukey-biweight, log2 (c-myc tagged WRKY22 transgenic plant/ Columbia wild-type plants [which is ChIP/ChIP control]) ratio
Links
Experiment E-GEOD-40140