P-GSE39151-4 - P-GSE39151-4

Type
normalization data transformation protocol
Description
Basecalls performed using phred/phrap software. Sequenced reads were trimmed for adaptor sequence, and masked for low-complexity or low-quality sequence, then mapped to Trichinella spiralis whole genome with SOAP2, allowing for no more than one nucleotide mismatch. Genome_build: Trichinella spiralis genome 3.7.1 Supplementary_files_format_and_content: tab-delimited text files include count for each sequence.
Links
Experiment E-GEOD-39151