P-GSE24178-3 - P-GSE24178-3

Type
feature_extraction
Description
fastq: ***Raw data*** Image analysis, base calling, quality filtering: Standard settings of GAPipeline 1.3+ using PhiX control; Fastq files contain full length reads (36nts) that passed the chastity filter. If necessary, quality scales were adjusted to phred64. bedGraph: ***Peak finder results***. Density of non-redundant alignments was determined in 100nt bins along the genome. SICER 1.03 was used to detect regions of enrichment over a theoretical background model (e=0.00001). BedGraph files show density in enriched regions only.
Links
Experiment E-GEOD-24178