Source Name Characteristics [organism] Characteristics [clinical history] Protocol REF Term Source REF Sample Name Material Type Characteristics [cell type] Characteristics [cell property] Characteristics [RNA interference] Protocol REF Term Source REF Extract Name Material Type Characteristics [DNase treatment] Protocol REF Term Source REF Labeled Extract Name Label Material Type Protocol REF Term Source REF Assay Name Technology Type Array Design REF Term Source REF Protocol REF Term Source REF Scan Name Array Data File Comment [ArrayExpress FTP file] Protocol REF Term Source REF Derived Array Data Matrix File Comment [Derived ArrayExpress FTP file] Factor Value [RNA interference] LS31 Homo sapiens rs4684847 CC risk allele carriers P-MTAB-34993 BASE LS31_siNT_2 cell adipose stromal cell primary cell Control P-MTAB-34990 BASE LS31_siNT_2.e1 total RNA on column P-MTAB-34989 BASE LS31_siNT_2.lbe1 biotin amplified cRNA P-TABM-4507 ArrayExpress LS31_siNT_2 array assay A-MEXP-2072 ArrayExpress P-MTAB-34992 BASE LS31_siNT_2.scan1.1 raw_data_file ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1906/E-MTAB-1906.raw.1.zip P-MTAB-34991 BASE processed_data_file ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1906/E-MTAB-1906.processed.1.zip Control LS24 Homo sapiens rs4684847 CC risk allele carriers P-MTAB-34993 BASE LS24_siPRRX1_3 cell adipose stromal cell primary cell PRRX1 knock-down P-MTAB-34990 BASE LS24_siPRRX1_3.e1 total RNA on column P-MTAB-34989 BASE LS24_siPRRX1_3.lbe1 biotin amplified cRNA P-TABM-4507 ArrayExpress LS24_siPRRX1_3 array assay A-MEXP-2072 ArrayExpress P-MTAB-34992 BASE LS24_siPRRX1_3.scan1.1 raw_data_file ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1906/E-MTAB-1906.raw.1.zip P-MTAB-34991 BASE processed_data_file ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1906/E-MTAB-1906.processed.1.zip PRRX1 knock-down LS34 Homo sapiens rs4684847 CC risk allele carriers P-MTAB-34993 BASE LS34_siPRRX1_siPPARG_1 cell adipose stromal cell primary cell PRRX1 PPARG2 knock-down P-MTAB-34990 BASE LS34_siPRRX1_siPPARG_1.e1 total RNA on column P-MTAB-34989 BASE LS34_siPRRX1_siPPARG_1.lbe1 biotin amplified cRNA P-TABM-4507 ArrayExpress LS34_siPRRX1_siPPARG_1 array assay A-MEXP-2072 ArrayExpress P-MTAB-34992 BASE LS34_siPRRX1_siPPARG_1.scan1.1 raw_data_file ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1906/E-MTAB-1906.raw.1.zip P-MTAB-34991 BASE processed_data_file ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1906/E-MTAB-1906.processed.1.zip PRRX1 PPARG2 knock-down LS21 Homo sapiens rs4684847 CC risk allele carriers P-MTAB-34993 BASE LS21_siPRRX1__1 cell adipose stromal cell primary cell PRRX1 knock-down P-MTAB-34990 BASE LS21_siPRRX1__1.e1 total RNA on column P-MTAB-34989 BASE LS21_siPRRX1__1.lbe1 biotin amplified cRNA P-TABM-4507 ArrayExpress LS21_siPRRX1__1 array assay A-MEXP-2072 ArrayExpress P-MTAB-34992 BASE LS21_siPRRX1__1.scan1.1 raw_data_file ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1906/E-MTAB-1906.raw.1.zip P-MTAB-34991 BASE processed_data_file ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1906/E-MTAB-1906.processed.1.zip PRRX1 knock-down LSD0-3 Homo sapiens rs4684847 CC risk allele carriers P-MTAB-34993 BASE LSD0-3_siPRRX1_siPPARG_2 cell adipose stromal cell primary cell PRRX1 PPARG2 knock-down P-MTAB-34990 BASE LSD0-3_siPRRX1_siPPARG_2.e1 total RNA on column P-MTAB-34989 BASE LSD0-3_siPRRX1_siPPARG_2.lbe1 biotin amplified cRNA P-TABM-4507 ArrayExpress LSD0-3_siPRRX1_siPPARG_2 array assay A-MEXP-2072 ArrayExpress P-MTAB-34992 BASE LSD0-3_siPRRX1_siPPARG_2.scan1.1 raw_data_file ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1906/E-MTAB-1906.raw.1.zip P-MTAB-34991 BASE processed_data_file ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1906/E-MTAB-1906.processed.1.zip PRRX1 PPARG2 knock-down LS33 Homo sapiens rs4684847 CC risk allele carriers P-MTAB-34993 BASE LS33_siPRRX1_siNT_1 cell adipose stromal cell primary cell PRRX1 knock-down P-MTAB-34990 BASE LS33_siPRRX1_siNT_1.e1 total RNA on column P-MTAB-34989 BASE LS33_siPRRX1_siNT_1.lbe1 biotin amplified cRNA P-TABM-4507 ArrayExpress LS33_siPRRX1_siNT_1 array assay A-MEXP-2072 ArrayExpress P-MTAB-34992 BASE LS33_siPRRX1_siNT_1.scan1.1 raw_data_file ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1906/E-MTAB-1906.raw.1.zip P-MTAB-34991 BASE processed_data_file ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1906/E-MTAB-1906.processed.1.zip PRRX1 knock-down LS17 Homo sapiens rs4684847 CC risk allele carriers P-MTAB-34993 BASE LS17_siNT__3 cell adipose stromal cell primary cell Control P-MTAB-34990 BASE LS17_siNT__3.e1 total RNA on column P-MTAB-34989 BASE LS17_siNT__3.lbe1 biotin amplified cRNA P-TABM-4507 ArrayExpress LS17_siNT__3 array assay A-MEXP-2072 ArrayExpress P-MTAB-34992 BASE LS17_siNT__3.scan1.1 raw_data_file ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1906/E-MTAB-1906.raw.1.zip P-MTAB-34991 BASE processed_data_file ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1906/E-MTAB-1906.processed.1.zip Control LS26 Homo sapiens rs4684847 CC risk allele carriers P-MTAB-34993 BASE LS26_siPRRX1_2 cell adipose stromal cell primary cell PRRX1 knock-down P-MTAB-34990 BASE LS26_siPRRX1_2.e1 total RNA on column P-MTAB-34989 BASE LS26_siPRRX1_2.lbe1 biotin amplified cRNA P-TABM-4507 ArrayExpress LS26_siPRRX1_2 array assay A-MEXP-2072 ArrayExpress P-MTAB-34992 BASE LS26_siPRRX1_2.scan1.1 raw_data_file ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1906/E-MTAB-1906.raw.1.zip P-MTAB-34991 BASE processed_data_file ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1906/E-MTAB-1906.processed.1.zip PRRX1 knock-down LS24 Homo sapiens rs4684847 CC risk allele carriers P-MTAB-34993 BASE LS24_siNT_3 cell adipose stromal cell primary cell Control P-MTAB-34990 BASE LS24_siNT_3.e1 total RNA on column P-MTAB-34989 BASE LS24_siNT_3.lbe1 biotin amplified cRNA P-TABM-4507 ArrayExpress LS24_siNT_3 array assay A-MEXP-2072 ArrayExpress P-MTAB-34992 BASE LS24_siNT_3.scan1.1 raw_data_file ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1906/E-MTAB-1906.raw.1.zip P-MTAB-34991 BASE processed_data_file ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1906/E-MTAB-1906.processed.1.zip Control LS31 Homo sapiens rs4684847 CC risk allele carriers P-MTAB-34993 BASE LS31_siPRRX1_siNT_2 cell adipose stromal cell primary cell PRRX1 knock-down P-MTAB-34990 BASE LS31_siPRRX1_siNT_2.e1 total RNA on column P-MTAB-34989 BASE LS31_siPRRX1_siNT_2.lbe1 biotin amplified cRNA P-TABM-4507 ArrayExpress LS31_siPRRX1_siNT_2 array assay A-MEXP-2072 ArrayExpress P-MTAB-34992 BASE LS31_siPRRX1_siNT_2.scan1.1 raw_data_file ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1906/E-MTAB-1906.raw.1.zip P-MTAB-34991 BASE processed_data_file ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1906/E-MTAB-1906.processed.1.zip PRRX1 knock-down LS22 Homo sapiens rs4684847 CC risk allele carriers P-MTAB-34993 BASE LS22_siNT_3 cell adipose stromal cell primary cell Control P-MTAB-34990 BASE LS22_siNT_3.e1 total RNA on column P-MTAB-34989 BASE LS22_siNT_3.lbe1 biotin amplified cRNA P-TABM-4507 ArrayExpress LS22_siNT_3 array assay A-MEXP-2072 ArrayExpress P-MTAB-34992 BASE LS22_siNT_3.scan1.1 raw_data_file ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1906/E-MTAB-1906.raw.1.zip P-MTAB-34991 BASE processed_data_file ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1906/E-MTAB-1906.processed.1.zip Control LS17 Homo sapiens rs4684847 CC risk allele carriers P-MTAB-34993 BASE LS17_siPRRX1__1 cell adipose stromal cell primary cell PRRX1 knock-down P-MTAB-34990 BASE LS17_siPRRX1__1.e1 total RNA on column P-MTAB-34989 BASE LS17_siPRRX1__1.lbe1 biotin amplified cRNA P-TABM-4507 ArrayExpress LS17_siPRRX1__1 array assay A-MEXP-2072 ArrayExpress P-MTAB-34992 BASE LS17_siPRRX1__1.scan1.1 raw_data_file ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1906/E-MTAB-1906.raw.1.zip P-MTAB-34991 BASE processed_data_file ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1906/E-MTAB-1906.processed.1.zip PRRX1 knock-down LS34 Homo sapiens rs4684847 CC risk allele carriers P-MTAB-34993 BASE LS34_siPRRX1_siNT_2 cell adipose stromal cell primary cell PRRX1 knock-down P-MTAB-34990 BASE LS34_siPRRX1_siNT_2.e1 total RNA on column P-MTAB-34989 BASE LS34_siPRRX1_siNT_2.lbe1 biotin amplified cRNA P-TABM-4507 ArrayExpress LS34_siPRRX1_siNT_2 array assay A-MEXP-2072 ArrayExpress P-MTAB-34992 BASE LS34_siPRRX1_siNT_2.scan1.1 raw_data_file ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1906/E-MTAB-1906.raw.1.zip P-MTAB-34991 BASE processed_data_file ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1906/E-MTAB-1906.processed.1.zip PRRX1 knock-down LSD0-3 Homo sapiens rs4684847 CC risk allele carriers P-MTAB-34993 BASE LSD0-3_siPRRX1_siNT_1 cell adipose stromal cell primary cell PRRX1 knock-down P-MTAB-34990 BASE LSD0-3_siPRRX1_siNT_1.e1 total RNA on column P-MTAB-34989 BASE LSD0-3_siPRRX1_siNT_1.lbe1 biotin amplified cRNA P-TABM-4507 ArrayExpress LSD0-3_siPRRX1_siNT_1 array assay A-MEXP-2072 ArrayExpress P-MTAB-34992 BASE LSD0-3_siPRRX1_siNT_1.scan1.1 raw_data_file ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1906/E-MTAB-1906.raw.1.zip P-MTAB-34991 BASE processed_data_file ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1906/E-MTAB-1906.processed.1.zip PRRX1 knock-down LS23 Homo sapiens rs4684847 CC risk allele carriers P-MTAB-34993 BASE LS23_siPRRX1_3 cell adipose stromal cell primary cell PRRX1 knock-down P-MTAB-34990 BASE LS23_siPRRX1_3.e1 total RNA on column P-MTAB-34989 BASE LS23_siPRRX1_3.lbe1 biotin amplified cRNA P-TABM-4507 ArrayExpress LS23_siPRRX1_3 array assay A-MEXP-2072 ArrayExpress P-MTAB-34992 BASE LS23_siPRRX1_3.scan1.1 raw_data_file ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1906/E-MTAB-1906.raw.1.zip P-MTAB-34991 BASE processed_data_file ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1906/E-MTAB-1906.processed.1.zip PRRX1 knock-down LS31 Homo sapiens rs4684847 CC risk allele carriers P-MTAB-34993 BASE LS31_siPRRX1_siPPARG_1 cell adipose stromal cell primary cell PRRX1 PPARG2 knock-down P-MTAB-34990 BASE LS31_siPRRX1_siPPARG_1.e1 total RNA on column P-MTAB-34989 BASE LS31_siPRRX1_siPPARG_1.lbe1 biotin amplified cRNA P-TABM-4507 ArrayExpress LS31_siPRRX1_siPPARG_1 array assay A-MEXP-2072 ArrayExpress P-MTAB-34992 BASE LS31_siPRRX1_siPPARG_1.scan1.1 raw_data_file ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1906/E-MTAB-1906.raw.1.zip P-MTAB-34991 BASE processed_data_file ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1906/E-MTAB-1906.processed.1.zip PRRX1 PPARG2 knock-down LS33 Homo sapiens rs4684847 CC risk allele carriers P-MTAB-34993 BASE LS33_siPRRX1_siPPARG_3 cell adipose stromal cell primary cell PRRX1 PPARG2 knock-down P-MTAB-34990 BASE LS33_siPRRX1_siPPARG_3.e1 total RNA on column P-MTAB-34989 BASE LS33_siPRRX1_siPPARG_3.lbe1 biotin amplified cRNA P-TABM-4507 ArrayExpress LS33_siPRRX1_siPPARG_3 array assay A-MEXP-2072 ArrayExpress P-MTAB-34992 BASE LS33_siPRRX1_siPPARG_3.scan1.1 raw_data_file ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1906/E-MTAB-1906.raw.1.zip P-MTAB-34991 BASE processed_data_file ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1906/E-MTAB-1906.processed.1.zip PRRX1 PPARG2 knock-down LS34 Homo sapiens rs4684847 CC risk allele carriers P-MTAB-34993 BASE LS34_siNT_3 cell adipose stromal cell primary cell Control P-MTAB-34990 BASE LS34_siNT_3.e1 total RNA on column P-MTAB-34989 BASE LS34_siNT_3.lbe1 biotin amplified cRNA P-TABM-4507 ArrayExpress LS34_siNT_3 array assay A-MEXP-2072 ArrayExpress P-MTAB-34992 BASE LS34_siNT_3.scan1.1 raw_data_file ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1906/E-MTAB-1906.raw.1.zip P-MTAB-34991 BASE processed_data_file ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1906/E-MTAB-1906.processed.1.zip Control LS26 Homo sapiens rs4684847 CC risk allele carriers P-MTAB-34993 BASE LS26_siNT_3 cell adipose stromal cell primary cell Control P-MTAB-34990 BASE LS26_siNT_3.e1 total RNA on column P-MTAB-34989 BASE LS26_siNT_3.lbe1 biotin amplified cRNA P-TABM-4507 ArrayExpress LS26_siNT_3 array assay A-MEXP-2072 ArrayExpress P-MTAB-34992 BASE LS26_siNT_3.scan1.1 raw_data_file ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1906/E-MTAB-1906.raw.1.zip P-MTAB-34991 BASE processed_data_file ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1906/E-MTAB-1906.processed.1.zip Control LS22 Homo sapiens rs4684847 CC risk allele carriers P-MTAB-34993 BASE LS22_siPRRX1_1 cell adipose stromal cell primary cell PRRX1 knock-down P-MTAB-34990 BASE LS22_siPRRX1_1.e1 total RNA on column P-MTAB-34989 BASE LS22_siPRRX1_1.lbe1 biotin amplified cRNA P-TABM-4507 ArrayExpress LS22_siPRRX1_1 array assay A-MEXP-2072 ArrayExpress P-MTAB-34992 BASE LS22_siPRRX1_1.scan1.1 raw_data_file ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1906/E-MTAB-1906.raw.1.zip P-MTAB-34991 BASE processed_data_file ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1906/E-MTAB-1906.processed.1.zip PRRX1 knock-down LSD0-3 Homo sapiens rs4684847 CC risk allele carriers P-MTAB-34993 BASE LSD0-3_siNT_1 cell adipose stromal cell primary cell Control P-MTAB-34990 BASE LSD0-3_siNT_1.e1 total RNA on column P-MTAB-34989 BASE LSD0-3_siNT_1.lbe1 biotin amplified cRNA P-TABM-4507 ArrayExpress LSD0-3_siNT_1 array assay A-MEXP-2072 ArrayExpress P-MTAB-34992 BASE LSD0-3_siNT_1.scan1.1 raw_data_file ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1906/E-MTAB-1906.raw.1.zip P-MTAB-34991 BASE processed_data_file ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1906/E-MTAB-1906.processed.1.zip Control LS21 Homo sapiens rs4684847 CC risk allele carriers P-MTAB-34993 BASE LS21_siNT__3 cell adipose stromal cell primary cell Control P-MTAB-34990 BASE LS21_siNT__3.e1 total RNA on column P-MTAB-34989 BASE LS21_siNT__3.lbe1 biotin amplified cRNA P-TABM-4507 ArrayExpress LS21_siNT__3 array assay A-MEXP-2072 ArrayExpress P-MTAB-34992 BASE LS21_siNT__3.scan1.1 raw_data_file ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1906/E-MTAB-1906.raw.1.zip P-MTAB-34991 BASE processed_data_file ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1906/E-MTAB-1906.processed.1.zip Control LS23 Homo sapiens rs4684847 CC risk allele carriers P-MTAB-34993 BASE LS23_siNT_3 cell adipose stromal cell primary cell Control P-MTAB-34990 BASE LS23_siNT_3.e1 total RNA on column P-MTAB-34989 BASE LS23_siNT_3.lbe1 biotin amplified cRNA P-TABM-4507 ArrayExpress LS23_siNT_3 array assay A-MEXP-2072 ArrayExpress P-MTAB-34992 BASE LS23_siNT_3.scan1.1 raw_data_file ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1906/E-MTAB-1906.raw.1.zip P-MTAB-34991 BASE processed_data_file ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1906/E-MTAB-1906.processed.1.zip Control