Source Name	Material Type	Provider	Characteristics[Organism]	Characteristics[specimen with known storage state]	Characteristics[phenotype]	Characteristics[cell type]	Characteristics[individual]	Protocol REF	Protocol REF	Protocol REF	Extract Name	Protocol REF	Labeled Extract Name	Label	Protocol REF	Assay Name	Array Design REF	Technology Type	Protocol REF	Array Data File	Factor Value[cell type]	Factor Value[phenotype]
Source 1	cell	Nash laboratory, primary cells from tissue	Homo sapiens	fresh specimen	Monoculture	Endothelial cell	Biological replicate 1	P-MTAB-31455	P-MTAB-31456	P-MTAB-31457	RNA Extract 2	P-MTAB-31458	Labeled Extract 1.Cy3	Cy3	P-MTAB-31459	assay 1	A-MEXP-2104	array assay	P-MTAB-31460	EC-Mono-1.txt	Endothelial cell	Monoculture
Source 2	cell	Nash laboratory, primary cells from tissue	Homo sapiens	fresh specimen	Coculture	Endothelial cell	Biological replicate 1	P-MTAB-31455	P-MTAB-31456	P-MTAB-31457	RNA Extract 3	P-MTAB-31458	Labeled Extract 1.Cy4	Cy4	P-MTAB-31459	assay 2	A-MEXP-2104	array assay	P-MTAB-31460	EC-Cocult-1.txt	Endothelial cell	Coculture
Source 3	cell	Lonza	Homo sapiens	fresh specimen	Monoculture	Mesenchymal stem cell	Biological replicate 1	P-MTAB-31455	P-MTAB-31456	P-MTAB-31457	RNA Extract 4	P-MTAB-31458	Labeled Extract 1.Cy5	Cy5	P-MTAB-31459	assay 3	A-MEXP-2104	array assay	P-MTAB-31460	MSC-Mono-1.txt	Mesenchymal stem cell	Monoculture
Source 4	cell	Lonza	Homo sapiens	fresh specimen	Coculture	Mesenchymal stem cell	Biological replicate 1	P-MTAB-31455	P-MTAB-31456	P-MTAB-31457	RNA Extract 5	P-MTAB-31458	Labeled Extract 1.Cy6	Cy6	P-MTAB-31459	assay 4	A-MEXP-2104	array assay	P-MTAB-31460	MSC-Cocult-1.txt	Mesenchymal stem cell	Coculture
Source 5	cell	Nash laboratory, primary cells from tissue	Homo sapiens	fresh specimen	Monoculture	Endothelial cell	Biological replicate 2	P-MTAB-31455	P-MTAB-31456	P-MTAB-31457	RNA Extract 6	P-MTAB-31458	Labeled Extract 1.Cy7	Cy7	P-MTAB-31459	assay 5	A-MEXP-2104	array assay	P-MTAB-31460	EC-Mono-2.txt	Endothelial cell	Monoculture
Source 6	cell	Nash laboratory, primary cells from tissue	Homo sapiens	fresh specimen	Coculture	Endothelial cell	Biological replicate 2	P-MTAB-31455	P-MTAB-31456	P-MTAB-31457	RNA Extract 7	P-MTAB-31458	Labeled Extract 1.Cy8	Cy8	P-MTAB-31459	assay 6	A-MEXP-2104	array assay	P-MTAB-31460	EC-Cocult-2.txt	Endothelial cell	Coculture
Source 7	cell	Lonza	Homo sapiens	fresh specimen	Monoculture	Mesenchymal stem cell	Biological replicate 2	P-MTAB-31455	P-MTAB-31456	P-MTAB-31457	RNA Extract 8	P-MTAB-31458	Labeled Extract 1.Cy9	Cy9	P-MTAB-31459	assay 7	A-MEXP-2104	array assay	P-MTAB-31460	MSC-Mono-2.txt	Mesenchymal stem cell	Monoculture
Source 8	cell	Lonza	Homo sapiens	fresh specimen	Coculture	Mesenchymal stem cell	Biological replicate 2	P-MTAB-31455	P-MTAB-31456	P-MTAB-31457	RNA Extract 9	P-MTAB-31458	Labeled Extract 1.Cy10	Cy10	P-MTAB-31459	assay 8	A-MEXP-2104	array assay	P-MTAB-31460	MSC-Cocult-2.txt	Mesenchymal stem cell	Coculture
Source 9	cell	Nash laboratory, primary cells from tissue	Homo sapiens	fresh specimen	Monoculture	Endothelial cell	Biological replicate 3	P-MTAB-31455	P-MTAB-31456	P-MTAB-31457	RNA Extract 10	P-MTAB-31458	Labeled Extract 1.Cy11	Cy11	P-MTAB-31459	assay 9	A-MEXP-2104	array assay	P-MTAB-31460	EC-Mono-3.txt	Endothelial cell	Monoculture
Source 10	cell	Nash laboratory, primary cells from tissue	Homo sapiens	fresh specimen	Coculture	Endothelial cell	Biological replicate 3	P-MTAB-31455	P-MTAB-31456	P-MTAB-31457	RNA Extract 11	P-MTAB-31458	Labeled Extract 1.Cy12	Cy12	P-MTAB-31459	assay 10	A-MEXP-2104	array assay	P-MTAB-31460	EC-Cocult-3.txt	Endothelial cell	Coculture
Source 11	cell	Lonza	Homo sapiens	fresh specimen	Monoculture	Mesenchymal stem cell	Biological replicate 3	P-MTAB-31455	P-MTAB-31456	P-MTAB-31457	RNA Extract 12	P-MTAB-31458	Labeled Extract 1.Cy13	Cy13	P-MTAB-31459	assay 11	A-MEXP-2104	array assay	P-MTAB-31460	MSC-Mono-3.txt	Mesenchymal stem cell	Monoculture
Source 12	cell	Lonza	Homo sapiens	fresh specimen	Coculture	Mesenchymal stem cell	Biological replicate 3	P-MTAB-31455	P-MTAB-31456	P-MTAB-31457	RNA Extract 13	P-MTAB-31458	Labeled Extract 1.Cy14	Cy14	P-MTAB-31459	assay 12	A-MEXP-2104	array assay	P-MTAB-31460	MSC-Cocult-3.txt	Mesenchymal stem cell	Coculture
Source 13	cell	Nash laboratory, primary cells from tissue	Homo sapiens	fresh specimen	Monoculture	Endothelial cell	Biological replicate 4	P-MTAB-31455	P-MTAB-31456	P-MTAB-31457	RNA Extract 14	P-MTAB-31458	Labeled Extract 1.Cy15	Cy15	P-MTAB-31459	assay 13	A-MEXP-2104	array assay	P-MTAB-31460	EC-Mono-4.txt	Endothelial cell	Monoculture
Source 14	cell	Nash laboratory, primary cells from tissue	Homo sapiens	fresh specimen	Coculture	Endothelial cell	Biological replicate 4	P-MTAB-31455	P-MTAB-31456	P-MTAB-31457	RNA Extract 15	P-MTAB-31458	Labeled Extract 1.Cy16	Cy16	P-MTAB-31459	assay 14	A-MEXP-2104	array assay	P-MTAB-31460	EC-Cocult-4.txt	Endothelial cell	Coculture
Source 15	cell	Lonza	Homo sapiens	fresh specimen	Monoculture	Mesenchymal stem cell	Biological replicate 4	P-MTAB-31455	P-MTAB-31456	P-MTAB-31457	RNA Extract 16	P-MTAB-31458	Labeled Extract 1.Cy17	Cy17	P-MTAB-31459	assay 15	A-MEXP-2104	array assay	P-MTAB-31460	MSC-Mono-4.txt	Mesenchymal stem cell	Monoculture
Source 16	cell	Lonza	Homo sapiens	fresh specimen	Coculture	Mesenchymal stem cell	Biological replicate 4	P-MTAB-31455	P-MTAB-31456	P-MTAB-31457	RNA Extract 17	P-MTAB-31458	Labeled Extract 1.Cy18	Cy18	P-MTAB-31459	assay 16	A-MEXP-2104	array assay	P-MTAB-31460	MSC-Cocult-4.txt	Mesenchymal stem cell	Coculture