Source Name	Material Type	Characteristics [Genotype]	Characteristics [Organism]	Protocol REF	Sample Name	Material Type	Protocol REF	Protocol REF	Extract Name	Material Type	Protocol REF	Labeled Extract Name	Material Type	Label	Protocol REF	Hybridization Name	Array Design REF	Protocol REF	Scan Name	Array Data File	Comment [ArrayExpress FTP file]	Protocol REF	Derived Array Data Matrix File	Comment [Derived ArrayExpress FTP file]	Factor Value [genotype]
upf1delta_1	whole organism	upf1-delta	Schizosaccharomyces pombe	P-MTAB-28752	upf1delta_1	total_RNA	P-MTAB-28756	P-MTAB-28757	E_upf1delta_purified_1	total_RNA	P-MTAB-28753	L_upf1delta_purified_1	synthetic_DNA	Alexa 555	P-MTAB-28755	H_upf1_1	A-MEXP-2049	P-MTAB-24669	252967610054_block1_scan 1	ah_252967610054_block1_scan 1.gpr	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1324/E-MTAB-1324.raw.1.zip	P-MTAB-28758	upf1_half-lives_FGEM.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1324/E-MTAB-1324.processed.1.zip	upf1-delta
upf1delta_1	whole organism	upf1-delta	Schizosaccharomyces pombe	P-MTAB-28752	upf1delta_1	total_RNA	P-MTAB-28756	  	E_upf1delta_total_1	total_RNA	P-MTAB-28754	L_upf1delta_total_1	synthetic_DNA	Alexa 647	P-MTAB-28755	H_upf1_1	A-MEXP-2049	P-MTAB-24669	252967610054_block1_scan 1	ah_252967610054_block1_scan 1.gpr	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1324/E-MTAB-1324.raw.1.zip	P-MTAB-28758	upf1_half-lives_FGEM.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1324/E-MTAB-1324.processed.1.zip	upf1-delta
wt_1	whole organism	wild_type	Schizosaccharomyces pombe	P-MTAB-28752	wt_1	total_RNA	P-MTAB-28756	P-MTAB-28757	E_wt_purified_1	total_RNA	P-MTAB-28753	L_wt_purified_1	synthetic_DNA	Alexa 555	P-MTAB-28755	H_wt_1	A-MEXP-2049	P-MTAB-24669	252967610054_block2	ah_252967610054_block2.gpr	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1324/E-MTAB-1324.raw.1.zip	P-MTAB-28758	upf1_half-lives_FGEM.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1324/E-MTAB-1324.processed.1.zip	wild type
wt_1	whole organism	wild_type	Schizosaccharomyces pombe	P-MTAB-28752	wt_1	total_RNA	P-MTAB-28756	  	E_wt_total_1	total_RNA	P-MTAB-28754	L_wt_total_1	synthetic_DNA	Alexa 647	P-MTAB-28755	H_wt_1	A-MEXP-2049	P-MTAB-24669	252967610054_block2	ah_252967610054_block2.gpr	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1324/E-MTAB-1324.raw.1.zip	P-MTAB-28758	upf1_half-lives_FGEM.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1324/E-MTAB-1324.processed.1.zip	wild type
upf1delta_2	whole organism	upf1-delta	Schizosaccharomyces pombe	P-MTAB-28752	upf1delta_2	total_RNA	P-MTAB-28756	P-MTAB-28757	E_upf1delta_purified_2	total_RNA	P-MTAB-28754	L_upf1delta_purified_2	synthetic_DNA	Alexa 647	P-MTAB-28755	H_upf1_2	A-MEXP-2049	P-MTAB-24669	252967610055_block1	ah_252967610055_block1.gpr	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1324/E-MTAB-1324.raw.1.zip	P-MTAB-28758	upf1_half-lives_FGEM.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1324/E-MTAB-1324.processed.1.zip	upf1-delta
upf1delta_2	whole organism	upf1-delta	Schizosaccharomyces pombe	P-MTAB-28752	upf1delta_2	total_RNA	P-MTAB-28756	  	E_upf1delta_total_2	total_RNA	P-MTAB-28753	L_upf1delta_total_2	synthetic_DNA	Alexa 555	P-MTAB-28755	H_upf1_2	A-MEXP-2049	P-MTAB-24669	252967610055_block1	ah_252967610055_block1.gpr	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1324/E-MTAB-1324.raw.1.zip	P-MTAB-28758	upf1_half-lives_FGEM.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1324/E-MTAB-1324.processed.1.zip	upf1-delta
wt_2	whole organism	wild_type	Schizosaccharomyces pombe	P-MTAB-28752	wt_2	total_RNA	P-MTAB-28756	P-MTAB-28757	E_wt_purified_2	total_RNA	P-MTAB-28754	L_wt_purified_2	synthetic_DNA	Alexa 647	P-MTAB-28755	H_wt_2	A-MEXP-2049	P-MTAB-24669	252967610055_block3	ah_252967610055_block3.gpr	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1324/E-MTAB-1324.raw.1.zip	P-MTAB-28758	upf1_half-lives_FGEM.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1324/E-MTAB-1324.processed.1.zip	wild type
wt_2	whole organism	wild_type	Schizosaccharomyces pombe	P-MTAB-28752	wt_2	total_RNA	P-MTAB-28756	  	E_wt_total_2	total_RNA	P-MTAB-28753	L_wt_total_2	synthetic_DNA	Alexa 555	P-MTAB-28755	H_wt_2	A-MEXP-2049	P-MTAB-24669	252967610055_block3	ah_252967610055_block3.gpr	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1324/E-MTAB-1324.raw.1.zip	P-MTAB-28758	upf1_half-lives_FGEM.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1324/E-MTAB-1324.processed.1.zip	wild type