Source Name Material Type Characteristics[Organism] Characteristics[Sex] Characteristics [OrganismPart] Characteristics [Disease_factor] Characteristics [Disease_staging] Characteristics [Tumor_grading] Characteristics [LymphNodeStatus] Characteristics [EstrogenReceptorStatus] Characteristics [ProgesteroneReceptorStatus] Characteristics [Subtype] Characteristics [Palpable] Characteristics [Recurrence] Protocol REF Protocol REF Extract Name Material Type Protocol REF Labeled Extract Name Label Material Type Protocol REF Hybridization Name Array Design REF Comment[Array serial number] Protocol REF Scan Name Array Data File Comment [ArrayExpress FTP file] Protocol REF Protocol REF Derived Array Data Matrix File Comment [Derived ArrayExpress FTP file] FactorValue[Disease_factor] FactorValue[Disease_staging] FactorValue[Tumor_grading] FactorValue[LymphNodeStatus] FactorValue[EstrogenReceptorStatus] FactorValue[ProgesteroneReceptorStatus] FactorValue[Subtype] FactorValue[Palpable] FactorValue[Recurrence] T101 organism_part Homo sapiens female mammary gland invasive ductal carcinoma T1 3 N0 Yes Yes LumB Yes No P-MTAB-26004 P-MTAB-25998 T101 RNA total_RNA P-MTAB-25999 T101 RNA Cy5 Cy5 synthetic_RNA P-MTAB-26000 T101 Cy5 UHR Cy3 hyb A-AGIL-11 251239120693 P-MTAB-26001 251239120693_S01 101_251239120693_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.1.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip invasive ductal carcinoma T1 3 N0 Yes Yes LumB Yes No UHR total_RNA Homo sapiens female mammary gland normal na na na na na na na na P-MTAB-25999 UHR Cy3 Cy3 synthetic_RNA P-MTAB-26000 T101 Cy5 UHR Cy3 hyb A-AGIL-11 251239120693 P-MTAB-26001 251239120693_S01 101_251239120693_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.1.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip normal na na na na na na na na T122 organism_part Homo sapiens female mammary gland invasive ductal carcinoma T2 3 N1 Yes No ERBB2 Yes No P-MTAB-26004 P-MTAB-25998 T122 RNA total_RNA P-MTAB-25999 T122 RNA Cy5 Cy5 synthetic_RNA P-MTAB-26000 T122 Cy5 UHR Cy3 hyb A-AGIL-11 251239119907 P-MTAB-26001 251239119907_S01 122_251239119907_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.1.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip invasive ductal carcinoma T2 3 N1 Yes No ERBB2 Yes No UHR total_RNA Homo sapiens female mammary gland normal na na na na na na na na P-MTAB-25999 UHR Cy3 Cy3 synthetic_RNA P-MTAB-26000 T122 Cy5 UHR Cy3 hyb A-AGIL-11 251239119907 P-MTAB-26001 251239119907_S01 122_251239119907_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.1.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip normal na na na na na na na na T124 organism_part Homo sapiens female mammary gland invasive ductal carcinoma T1 1 N0 Yes Yes Normal No No P-MTAB-26004 P-MTAB-25998 T124 RNA total_RNA P-MTAB-25999 T124 RNA Cy5 Cy5 synthetic_RNA P-MTAB-26000 T124 Cy5 UHR Cy3 hyb A-AGIL-11 251239120579 P-MTAB-26001 251239120579_S01 124_251239120579_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.1.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip invasive ductal carcinoma T1 1 N0 Yes Yes Normal No No UHR total_RNA Homo sapiens female mammary gland normal na na na na na na na na P-MTAB-25999 UHR Cy3 Cy3 synthetic_RNA P-MTAB-26000 T124 Cy5 UHR Cy3 hyb A-AGIL-11 251239120579 P-MTAB-26001 251239120579_S01 124_251239120579_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.1.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip normal na na na na na na na na T129 organism_part Homo sapiens female mammary gland invasive ductal carcinoma T1 2 N0 Yes No Normal No No P-MTAB-26004 P-MTAB-25998 T129 RNA total_RNA P-MTAB-25999 T129 RNA Cy5 Cy5 synthetic_RNA P-MTAB-26000 T129 Cy5 UHR Cy3 hyb A-AGIL-11 251239120580 P-MTAB-26001 251239120580_S01 129_251239120580_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.1.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip invasive ductal carcinoma T1 2 N0 Yes No Normal No No UHR total_RNA Homo sapiens female mammary gland normal na na na na na na na na P-MTAB-25999 UHR Cy3 Cy3 synthetic_RNA P-MTAB-26000 T129 Cy5 UHR Cy3 hyb A-AGIL-11 251239120580 P-MTAB-26001 251239120580_S01 129_251239120580_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.1.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip normal na na na na na na na na T130 organism_part Homo sapiens female mammary gland invasive ductal carcinoma T2 3 N2 Yes Yes ERBB2 Yes Yes P-MTAB-26004 P-MTAB-25998 T130 RNA total_RNA P-MTAB-25999 T130 RNA Cy5 Cy5 synthetic_RNA P-MTAB-26000 T130 Cy5 UHR Cy3 hyb A-AGIL-11 251239120692 P-MTAB-26001 251239120692_S01 130_251239120692_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.1.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip invasive ductal carcinoma T2 3 N2 Yes Yes ERBB2 Yes Yes UHR total_RNA Homo sapiens female mammary gland normal na na na na na na na na P-MTAB-25999 UHR Cy3 Cy3 synthetic_RNA P-MTAB-26000 T130 Cy5 UHR Cy3 hyb A-AGIL-11 251239120692 P-MTAB-26001 251239120692_S01 130_251239120692_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.1.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip normal na na na na na na na na T143 organism_part Homo sapiens female mammary gland invasive ductal carcinoma T2 2 N0 Yes Yes LumB Yes Yes P-MTAB-26004 P-MTAB-25998 T143 RNA total_RNA P-MTAB-25999 T143 RNA Cy5 Cy5 synthetic_RNA P-MTAB-26000 T143 Cy5 UHR Cy3 hyb A-AGIL-11 251239120557 P-MTAB-26001 251239120557_S01 143_251239120557_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.1.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip invasive ductal carcinoma T2 2 N0 Yes Yes LumB Yes Yes UHR total_RNA Homo sapiens female mammary gland normal na na na na na na na na P-MTAB-25999 UHR Cy3 Cy3 synthetic_RNA P-MTAB-26000 T143 Cy5 UHR Cy3 hyb A-AGIL-11 251239120557 P-MTAB-26001 251239120557_S01 143_251239120557_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.1.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip normal na na na na na na na na T147 organism_part Homo sapiens female mammary gland invasive ductal carcinoma T1 1 N0 Yes Yes Normal No No P-MTAB-26004 P-MTAB-25998 T147 RNA total_RNA P-MTAB-25999 T147 RNA Cy5 Cy5 synthetic_RNA P-MTAB-26000 T147 Cy5 UHR Cy3 hyb A-AGIL-11 251239120638 P-MTAB-26001 251239120638_S01 147_251239120638_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.1.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip invasive ductal carcinoma T1 1 N0 Yes Yes Normal No No UHR total_RNA Homo sapiens female mammary gland normal na na na na na na na na P-MTAB-25999 UHR Cy3 Cy3 synthetic_RNA P-MTAB-26000 T147 Cy5 UHR Cy3 hyb A-AGIL-11 251239120638 P-MTAB-26001 251239120638_S01 147_251239120638_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.1.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip normal na na na na na na na na T148 organism_part Homo sapiens female mammary gland invasive ductal carcinoma T1 2 N0 Yes Yes Normal No No P-MTAB-26004 P-MTAB-25998 T148 RNA total_RNA P-MTAB-25999 T148 RNA Cy5 Cy5 synthetic_RNA P-MTAB-26000 T148 Cy5 UHR Cy3 hyb A-AGIL-11 251239120578 P-MTAB-26001 251239120578_S01 148_251239120578_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.1.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip invasive ductal carcinoma T1 2 N0 Yes Yes Normal No No UHR total_RNA Homo sapiens female mammary gland normal na na na na na na na na P-MTAB-25999 UHR Cy3 Cy3 synthetic_RNA P-MTAB-26000 T148 Cy5 UHR Cy3 hyb A-AGIL-11 251239120578 P-MTAB-26001 251239120578_S01 148_251239120578_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.1.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip normal na na na na na na na na T149 organism_part Homo sapiens female mammary gland invasive ductal carcinoma T1 1 N0 Yes Yes Normal No No P-MTAB-26004 P-MTAB-25998 T149 RNA total_RNA P-MTAB-25999 T149 RNA Cy5 Cy5 synthetic_RNA P-MTAB-26000 T149 Cy5 UHR Cy3 hyb A-AGIL-11 251239120637 P-MTAB-26001 251239120637_S01 149_251239120637_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.1.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip invasive ductal carcinoma T1 1 N0 Yes Yes Normal No No UHR total_RNA Homo sapiens female mammary gland normal na na na na na na na na P-MTAB-25999 UHR Cy3 Cy3 synthetic_RNA P-MTAB-26000 T149 Cy5 UHR Cy3 hyb A-AGIL-11 251239120637 P-MTAB-26001 251239120637_S01 149_251239120637_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.1.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip normal na na na na na na na na T152 organism_part Homo sapiens female mammary gland invasive ductal carcinoma T1 2 N1 Yes Yes LumA Yes No P-MTAB-26004 P-MTAB-25998 T152 RNA total_RNA P-MTAB-25999 T152 RNA Cy5 Cy5 synthetic_RNA P-MTAB-26000 T152 Cy5 UHR Cy3 hyb A-AGIL-11 251239151440 P-MTAB-26001 251239151440_S01 152_251239151440_S01_GE2-v4_91.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.1.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip invasive ductal carcinoma T1 2 N1 Yes Yes LumA Yes No UHR total_RNA Homo sapiens female mammary gland normal na na na na na na na na P-MTAB-25999 UHR Cy3 Cy3 synthetic_RNA P-MTAB-26000 T152 Cy5 UHR Cy3 hyb A-AGIL-11 251239151440 P-MTAB-26001 251239151440_S01 152_251239151440_S01_GE2-v4_91.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.1.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip normal na na na na na na na na T170 organism_part Homo sapiens female mammary gland invasive ductal carcinoma T2 2 N1 No No ERBB2 Yes No P-MTAB-26004 P-MTAB-25998 T170 RNA total_RNA P-MTAB-25999 T170 RNA Cy5 Cy5 synthetic_RNA P-MTAB-26000 T170 Cy5 UHR Cy3 hyb A-AGIL-11 251239149759 P-MTAB-26001 251239149759_S01 170_251239149759_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.1.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip invasive ductal carcinoma T2 2 N1 No No ERBB2 Yes No UHR total_RNA Homo sapiens female mammary gland normal na na na na na na na na P-MTAB-25999 UHR Cy3 Cy3 synthetic_RNA P-MTAB-26000 T170 Cy5 UHR Cy3 hyb A-AGIL-11 251239149759 P-MTAB-26001 251239149759_S01 170_251239149759_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.1.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip normal na na na na na na na na T172 organism_part Homo sapiens female mammary gland invasive ductal carcinoma T1 2 N1 No No Basal Yes No P-MTAB-26004 P-MTAB-25998 T172 RNA total_RNA P-MTAB-25999 T172 RNA Cy5 Cy5 synthetic_RNA P-MTAB-26000 T172 Cy5 UHR Cy3 hyb A-AGIL-11 251239151441 P-MTAB-26001 251239151441_S01 172_251239151441_S01_GE2-v4_91.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.1.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip invasive ductal carcinoma T1 2 N1 No No Basal Yes No UHR total_RNA Homo sapiens female mammary gland normal na na na na na na na na P-MTAB-25999 UHR Cy3 Cy3 synthetic_RNA P-MTAB-26000 T172 Cy5 UHR Cy3 hyb A-AGIL-11 251239151441 P-MTAB-26001 251239151441_S01 172_251239151441_S01_GE2-v4_91.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.1.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip normal na na na na na na na na T175 organism_part Homo sapiens female mammary gland invasive ductal carcinoma T2 3 N0 No No ERBB2 Yes No P-MTAB-26004 P-MTAB-25998 T175 RNA total_RNA P-MTAB-25999 T175 RNA Cy5 Cy5 synthetic_RNA P-MTAB-26000 T175 Cy5 UHR Cy3 hyb A-AGIL-11 251239149760 P-MTAB-26001 251239149760_S01 175_251239149760_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.1.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip invasive ductal carcinoma T2 3 N0 No No ERBB2 Yes No UHR total_RNA Homo sapiens female mammary gland normal na na na na na na na na P-MTAB-25999 UHR Cy3 Cy3 synthetic_RNA P-MTAB-26000 T175 Cy5 UHR Cy3 hyb A-AGIL-11 251239149760 P-MTAB-26001 251239149760_S01 175_251239149760_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.1.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip normal na na na na na na na na T176 organism_part Homo sapiens female mammary gland invasive ductal carcinoma T2 3 N0 Yes Yes Unclassified Yes No P-MTAB-26004 P-MTAB-25998 T176 RNA total_RNA P-MTAB-25999 T176 RNA Cy5 Cy5 synthetic_RNA P-MTAB-26000 T176 Cy5 UHR Cy3 hyb A-AGIL-11 251239149761 P-MTAB-26001 251239149761_S01 176_251239149761_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.1.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip invasive ductal carcinoma T2 3 N0 Yes Yes Unclassified Yes No UHR total_RNA Homo sapiens female mammary gland normal na na na na na na na na P-MTAB-25999 UHR Cy3 Cy3 synthetic_RNA P-MTAB-26000 T176 Cy5 UHR Cy3 hyb A-AGIL-11 251239149761 P-MTAB-26001 251239149761_S01 176_251239149761_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.1.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip normal na na na na na na na na T178 organism_part Homo sapiens female mammary gland invasive ductal carcinoma T1 2 N1 No Yes Unclassified Yes Yes P-MTAB-26004 P-MTAB-25998 T178 RNA total_RNA P-MTAB-25999 T178 RNA Cy5 Cy5 synthetic_RNA P-MTAB-26000 T178 Cy5 UHR Cy3 hyb A-AGIL-11 251239149804 P-MTAB-26001 251239149804_S01 178_251239149804_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.1.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip invasive ductal carcinoma T1 2 N1 No Yes Unclassified Yes Yes UHR total_RNA Homo sapiens female mammary gland normal na na na na na na na na P-MTAB-25999 UHR Cy3 Cy3 synthetic_RNA P-MTAB-26000 T178 Cy5 UHR Cy3 hyb A-AGIL-11 251239149804 P-MTAB-26001 251239149804_S01 178_251239149804_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.1.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip normal na na na na na na na na T179 organism_part Homo sapiens female mammary gland invasive ductal carcinoma T1 2 N1 Yes Yes LumA Yes No P-MTAB-26004 P-MTAB-25998 T179 RNA total_RNA P-MTAB-25999 T179 RNA Cy5 Cy5 synthetic_RNA P-MTAB-26000 T179 Cy5 UHR Cy3 hyb A-AGIL-11 251239151442 P-MTAB-26001 251239151442_S01 179_251239151442_S01_GE2-v4_91.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.1.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip invasive ductal carcinoma T1 2 N1 Yes Yes LumA Yes No UHR total_RNA Homo sapiens female mammary gland normal na na na na na na na na P-MTAB-25999 UHR Cy3 Cy3 synthetic_RNA P-MTAB-26000 T179 Cy5 UHR Cy3 hyb A-AGIL-11 251239151442 P-MTAB-26001 251239151442_S01 179_251239151442_S01_GE2-v4_91.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.1.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip normal na na na na na na na na T191 organism_part Homo sapiens female mammary gland invasive ductal carcinoma T1 1 N0 Yes Yes LumA Yes No P-MTAB-26004 P-MTAB-25998 T191 RNA total_RNA P-MTAB-25999 T191 RNA Cy5 Cy5 synthetic_RNA P-MTAB-26000 T191 Cy5 UHR Cy3 hyb A-AGIL-11 251239151384 P-MTAB-26001 251239151384_S01 191_251239151384_S01_GE2-v4_91.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.2.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip invasive ductal carcinoma T1 1 N0 Yes Yes LumA Yes No UHR total_RNA Homo sapiens female mammary gland normal na na na na na na na na P-MTAB-25999 UHR Cy3 Cy3 synthetic_RNA P-MTAB-26000 T191 Cy5 UHR Cy3 hyb A-AGIL-11 251239151384 P-MTAB-26001 251239151384_S01 191_251239151384_S01_GE2-v4_91.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.2.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip normal na na na na na na na na T200 organism_part Homo sapiens female mammary gland invasive ductal carcinoma T1 2 N0 No Yes LumA Yes No P-MTAB-26004 P-MTAB-25998 T200 RNA total_RNA P-MTAB-25999 T200 RNA Cy5 Cy5 synthetic_RNA P-MTAB-26000 T200 Cy5 UHR Cy3 hyb A-AGIL-11 251239151387 P-MTAB-26001 251239151387_S01 200_251239151387_S01_GE2-v4_91.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.2.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip invasive ductal carcinoma T1 2 N0 No Yes LumA Yes No UHR total_RNA Homo sapiens female mammary gland normal na na na na na na na na P-MTAB-25999 UHR Cy3 Cy3 synthetic_RNA P-MTAB-26000 T200 Cy5 UHR Cy3 hyb A-AGIL-11 251239151387 P-MTAB-26001 251239151387_S01 200_251239151387_S01_GE2-v4_91.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.2.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip normal na na na na na na na na T211 organism_part Homo sapiens female mammary gland invasive ductal carcinoma T1 2 N2 Yes Yes LumA Yes No P-MTAB-26004 P-MTAB-25998 T211 RNA total_RNA P-MTAB-25999 T211 RNA Cy5 Cy5 synthetic_RNA P-MTAB-26000 T211 Cy5 UHR Cy3 hyb A-AGIL-11 251239151388 P-MTAB-26001 251239151388_S01 211_251239151388_S01_GE2-v4_91.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.2.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip invasive ductal carcinoma T1 2 N2 Yes Yes LumA Yes No UHR total_RNA Homo sapiens female mammary gland normal na na na na na na na na P-MTAB-25999 UHR Cy3 Cy3 synthetic_RNA P-MTAB-26000 T211 Cy5 UHR Cy3 hyb A-AGIL-11 251239151388 P-MTAB-26001 251239151388_S01 211_251239151388_S01_GE2-v4_91.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.2.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip normal na na na na na na na na T213 organism_part Homo sapiens female mammary gland invasive ductal carcinoma T2 3 N1 No No ERBB2 Yes No P-MTAB-26004 P-MTAB-25998 T213 RNA total_RNA P-MTAB-25999 T213 RNA Cy5 Cy5 synthetic_RNA P-MTAB-26000 T213 Cy5 UHR Cy3 hyb A-AGIL-11 251239149805 P-MTAB-26001 251239149805_S01 213_251239149805_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.2.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip invasive ductal carcinoma T2 3 N1 No No ERBB2 Yes No UHR total_RNA Homo sapiens female mammary gland normal na na na na na na na na P-MTAB-25999 UHR Cy3 Cy3 synthetic_RNA P-MTAB-26000 T213 Cy5 UHR Cy3 hyb A-AGIL-11 251239149805 P-MTAB-26001 251239149805_S01 213_251239149805_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.2.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip normal na na na na na na na na T214 organism_part Homo sapiens female mammary gland invasive ductal carcinoma T1 2 N0 Yes No LumB Yes No P-MTAB-26004 P-MTAB-25998 T214 RNA total_RNA P-MTAB-25999 T214 RNA Cy5 Cy5 synthetic_RNA P-MTAB-26000 T214 Cy5 UHR Cy3 hyb A-AGIL-11 251239149807 P-MTAB-26001 251239149807_S01 214_251239149807_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.2.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip invasive ductal carcinoma T1 2 N0 Yes No LumB Yes No UHR total_RNA Homo sapiens female mammary gland normal na na na na na na na na P-MTAB-25999 UHR Cy3 Cy3 synthetic_RNA P-MTAB-26000 T214 Cy5 UHR Cy3 hyb A-AGIL-11 251239149807 P-MTAB-26001 251239149807_S01 214_251239149807_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.2.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip normal na na na na na na na na T218 organism_part Homo sapiens female mammary gland invasive ductal carcinoma T2 2 N1 Yes No LumA Yes No P-MTAB-26004 P-MTAB-25998 T218 RNA total_RNA P-MTAB-25999 T218 RNA Cy5 Cy5 synthetic_RNA P-MTAB-26000 T218 Cy5 UHR Cy3 hyb A-AGIL-11 251239151356 P-MTAB-26001 251239151356_S01 218_251239151356_S01_GE2-v4_91.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.2.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip invasive ductal carcinoma T2 2 N1 Yes No LumA Yes No UHR total_RNA Homo sapiens female mammary gland normal na na na na na na na na P-MTAB-25999 UHR Cy3 Cy3 synthetic_RNA P-MTAB-26000 T218 Cy5 UHR Cy3 hyb A-AGIL-11 251239151356 P-MTAB-26001 251239151356_S01 218_251239151356_S01_GE2-v4_91.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.2.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip normal na na na na na na na na T222 organism_part Homo sapiens female mammary gland invasive ductal carcinoma T2 2 N0 Yes Yes LumA No Yes P-MTAB-26004 P-MTAB-25998 T222 RNA total_RNA P-MTAB-25999 T222 RNA Cy5 Cy5 synthetic_RNA P-MTAB-26000 T222 Cy5 UHR Cy3 hyb A-AGIL-11 251239151357 P-MTAB-26001 251239151357_S01 222_251239151357_S01_GE2-v4_91.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.2.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip invasive ductal carcinoma T2 2 N0 Yes Yes LumA No Yes UHR total_RNA Homo sapiens female mammary gland normal na na na na na na na na P-MTAB-25999 UHR Cy3 Cy3 synthetic_RNA P-MTAB-26000 T222 Cy5 UHR Cy3 hyb A-AGIL-11 251239151357 P-MTAB-26001 251239151357_S01 222_251239151357_S01_GE2-v4_91.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.2.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip normal na na na na na na na na T227 organism_part Homo sapiens female mammary gland invasive ductal carcinoma T1 2 N0 No Yes LumA Yes No P-MTAB-26004 P-MTAB-25998 T227 RNA total_RNA P-MTAB-25999 T227 RNA Cy5 Cy5 synthetic_RNA P-MTAB-26000 T227 Cy5 UHR Cy3 hyb A-AGIL-11 251239151369 P-MTAB-26001 251239151369_S01 227_251239151369_S01_GE2-v4_91.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.2.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip invasive ductal carcinoma T1 2 N0 No Yes LumA Yes No UHR total_RNA Homo sapiens female mammary gland normal na na na na na na na na P-MTAB-25999 UHR Cy3 Cy3 synthetic_RNA P-MTAB-26000 T227 Cy5 UHR Cy3 hyb A-AGIL-11 251239151369 P-MTAB-26001 251239151369_S01 227_251239151369_S01_GE2-v4_91.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.2.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip normal na na na na na na na na T228 organism_part Homo sapiens female mammary gland invasive ductal carcinoma T2 3 N0 No No Basal Yes No P-MTAB-26004 P-MTAB-25998 T228 RNA total_RNA P-MTAB-25999 T228 RNA Cy5 Cy5 synthetic_RNA P-MTAB-26000 T228 Cy5 UHR Cy3 hyb A-AGIL-11 251239149808 P-MTAB-26001 251239149808_S01 228_251239149808_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.2.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip invasive ductal carcinoma T2 3 N0 No No Basal Yes No UHR total_RNA Homo sapiens female mammary gland normal na na na na na na na na P-MTAB-25999 UHR Cy3 Cy3 synthetic_RNA P-MTAB-26000 T228 Cy5 UHR Cy3 hyb A-AGIL-11 251239149808 P-MTAB-26001 251239149808_S01 228_251239149808_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.2.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip normal na na na na na na na na T231 organism_part Homo sapiens female mammary gland invasive ductal carcinoma T2 2 N0 Yes No LumA No No P-MTAB-26004 P-MTAB-25998 T231 RNA total_RNA P-MTAB-25999 T231 RNA Cy5 Cy5 synthetic_RNA P-MTAB-26000 T231 Cy5 UHR Cy3 hyb A-AGIL-11 251239151449 P-MTAB-26001 251239151449_S01 231_251239151449_S01_GE2-v4_91.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.2.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip invasive ductal carcinoma T2 2 N0 Yes No LumA No No UHR total_RNA Homo sapiens female mammary gland normal na na na na na na na na P-MTAB-25999 UHR Cy3 Cy3 synthetic_RNA P-MTAB-26000 T231 Cy5 UHR Cy3 hyb A-AGIL-11 251239151449 P-MTAB-26001 251239151449_S01 231_251239151449_S01_GE2-v4_91.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.2.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip normal na na na na na na na na T233 organism_part Homo sapiens female mammary gland invasive ductal carcinoma T2 3 N0 No No Basal Yes Yes P-MTAB-26004 P-MTAB-25998 T233 RNA total_RNA P-MTAB-25999 T233 RNA Cy5 Cy5 synthetic_RNA P-MTAB-26000 T233 Cy5 UHR Cy3 hyb A-AGIL-11 251239149809 P-MTAB-26001 251239149809_S01 233_251239149809_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.2.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip invasive ductal carcinoma T2 3 N0 No No Basal Yes Yes UHR total_RNA Homo sapiens female mammary gland normal na na na na na na na na P-MTAB-25999 UHR Cy3 Cy3 synthetic_RNA P-MTAB-26000 T233 Cy5 UHR Cy3 hyb A-AGIL-11 251239149809 P-MTAB-26001 251239149809_S01 233_251239149809_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.2.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip normal na na na na na na na na T237 organism_part Homo sapiens female mammary gland invasive ductal carcinoma T2 2 N0 Yes Yes LumA No No P-MTAB-26004 P-MTAB-25998 T237 RNA total_RNA P-MTAB-25999 T237 RNA Cy5 Cy5 synthetic_RNA P-MTAB-26000 T237 Cy5 UHR Cy3 hyb A-AGIL-11 251239151450 P-MTAB-26001 251239151450_S01 237_251239151450_S01_GE2-v4_91.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.2.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip invasive ductal carcinoma T2 2 N0 Yes Yes LumA No No UHR total_RNA Homo sapiens female mammary gland normal na na na na na na na na P-MTAB-25999 UHR Cy3 Cy3 synthetic_RNA P-MTAB-26000 T237 Cy5 UHR Cy3 hyb A-AGIL-11 251239151450 P-MTAB-26001 251239151450_S01 237_251239151450_S01_GE2-v4_91.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.2.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip normal na na na na na na na na T24 organism_part Homo sapiens female mammary gland invasive ductal carcinoma T1 2 N1 Yes Yes Normal No No P-MTAB-26004 P-MTAB-25998 T24 RNA total_RNA P-MTAB-25999 T24 RNA Cy5 Cy5 synthetic_RNA P-MTAB-26000 T24 Cy5 UHR Cy3 hyb A-AGIL-11 251239120565 P-MTAB-26001 251239120565_S01 24_251239120565_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.2.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip invasive ductal carcinoma T1 2 N1 Yes Yes Normal No No UHR total_RNA Homo sapiens female mammary gland normal na na na na na na na na P-MTAB-25999 UHR Cy3 Cy3 synthetic_RNA P-MTAB-26000 T24 Cy5 UHR Cy3 hyb A-AGIL-11 251239120565 P-MTAB-26001 251239120565_S01 24_251239120565_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.2.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip normal na na na na na na na na T244 organism_part Homo sapiens female mammary gland invasive ductal carcinoma T1 2 N0 Yes Yes LumB No No P-MTAB-26004 P-MTAB-25998 T244 RNA total_RNA P-MTAB-25999 T244 RNA Cy5 Cy5 synthetic_RNA P-MTAB-26000 T244 Cy5 UHR Cy3 hyb A-AGIL-11 251239149858 P-MTAB-26001 251239149858_S01 244_251239149858_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.2.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip invasive ductal carcinoma T1 2 N0 Yes Yes LumB No No UHR total_RNA Homo sapiens female mammary gland normal na na na na na na na na P-MTAB-25999 UHR Cy3 Cy3 synthetic_RNA P-MTAB-26000 T244 Cy5 UHR Cy3 hyb A-AGIL-11 251239149858 P-MTAB-26001 251239149858_S01 244_251239149858_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.2.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip normal na na na na na na na na T270 organism_part Homo sapiens female mammary gland invasive ductal carcinoma T2 3 N0 Yes No LumB Yes Yes P-MTAB-26004 P-MTAB-25998 T270 RNA total_RNA P-MTAB-25999 T270 RNA Cy5 Cy5 synthetic_RNA P-MTAB-26000 T270 Cy5 UHR Cy3 hyb A-AGIL-11 251239149859 P-MTAB-26001 251239149859_S01 270_251239149859_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.2.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip invasive ductal carcinoma T2 3 N0 Yes No LumB Yes Yes UHR total_RNA Homo sapiens female mammary gland normal na na na na na na na na P-MTAB-25999 UHR Cy3 Cy3 synthetic_RNA P-MTAB-26000 T270 Cy5 UHR Cy3 hyb A-AGIL-11 251239149859 P-MTAB-26001 251239149859_S01 270_251239149859_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.2.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip normal na na na na na na na na T272 organism_part Homo sapiens female mammary gland invasive ductal carcinoma T2 2 N1 Yes No Basal Yes No P-MTAB-26004 P-MTAB-25998 T272 RNA total_RNA P-MTAB-25999 T272 RNA Cy5 Cy5 synthetic_RNA P-MTAB-26000 T272 Cy5 UHR Cy3 hyb A-AGIL-11 251239151451 P-MTAB-26001 251239151451_S01 272_251239151451_S01_GE2-v4_91.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.2.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip invasive ductal carcinoma T2 2 N1 Yes No Basal Yes No UHR total_RNA Homo sapiens female mammary gland normal na na na na na na na na P-MTAB-25999 UHR Cy3 Cy3 synthetic_RNA P-MTAB-26000 T272 Cy5 UHR Cy3 hyb A-AGIL-11 251239151451 P-MTAB-26001 251239151451_S01 272_251239151451_S01_GE2-v4_91.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.2.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip normal na na na na na na na na T280 organism_part Homo sapiens female mammary gland invasive ductal carcinoma T2 2 N0 No Yes LumB Yes No P-MTAB-26004 P-MTAB-25998 T280 RNA total_RNA P-MTAB-25999 T280 RNA Cy5 Cy5 synthetic_RNA P-MTAB-26000 T280 Cy5 UHR Cy3 hyb A-AGIL-11 251239149860 P-MTAB-26001 251239149860_S01 280_251239149860_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.3.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip invasive ductal carcinoma T2 2 N0 No Yes LumB Yes No UHR total_RNA Homo sapiens female mammary gland normal na na na na na na na na P-MTAB-25999 UHR Cy3 Cy3 synthetic_RNA P-MTAB-26000 T280 Cy5 UHR Cy3 hyb A-AGIL-11 251239149860 P-MTAB-26001 251239149860_S01 280_251239149860_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.3.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip normal na na na na na na na na T283 organism_part Homo sapiens female mammary gland invasive ductal carcinoma T1 2 N1 Yes No Unclassified Yes No P-MTAB-26004 P-MTAB-25998 T283 RNA total_RNA P-MTAB-25999 T283 RNA Cy5 Cy5 synthetic_RNA P-MTAB-26000 T283 Cy5 UHR Cy3 hyb A-AGIL-11 251239149861 P-MTAB-26001 251239149861_S01 283_251239149861_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.3.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip invasive ductal carcinoma T1 2 N1 Yes No Unclassified Yes No UHR total_RNA Homo sapiens female mammary gland normal na na na na na na na na P-MTAB-25999 UHR Cy3 Cy3 synthetic_RNA P-MTAB-26000 T283 Cy5 UHR Cy3 hyb A-AGIL-11 251239149861 P-MTAB-26001 251239149861_S01 283_251239149861_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.3.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip normal na na na na na na na na T29 organism_part Homo sapiens female mammary gland invasive ductal carcinoma T1 2 N0 Yes Yes Normal No No P-MTAB-26004 P-MTAB-25998 T29 RNA total_RNA P-MTAB-25999 T29 RNA Cy5 Cy5 synthetic_RNA P-MTAB-26000 T29 Cy5 UHR Cy3 hyb A-AGIL-11 251239120551 P-MTAB-26001 251239120551_S01 29_251239120551_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.3.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip invasive ductal carcinoma T1 2 N0 Yes Yes Normal No No UHR total_RNA Homo sapiens female mammary gland normal na na na na na na na na P-MTAB-25999 UHR Cy3 Cy3 synthetic_RNA P-MTAB-26000 T29 Cy5 UHR Cy3 hyb A-AGIL-11 251239120551 P-MTAB-26001 251239120551_S01 29_251239120551_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.3.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip normal na na na na na na na na T51 organism_part Homo sapiens female mammary gland invasive ductal carcinoma T1 1 N0 Yes No Normal No No P-MTAB-26004 P-MTAB-25998 T51 RNA total_RNA P-MTAB-25999 T51 RNA Cy5 Cy5 synthetic_RNA P-MTAB-26000 T51 Cy5 UHR Cy3 hyb A-AGIL-11 251239120649 P-MTAB-26001 251239120649_S01 51_251239120649_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.3.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip invasive ductal carcinoma T1 1 N0 Yes No Normal No No UHR total_RNA Homo sapiens female mammary gland normal na na na na na na na na P-MTAB-25999 UHR Cy3 Cy3 synthetic_RNA P-MTAB-26000 T51 Cy5 UHR Cy3 hyb A-AGIL-11 251239120649 P-MTAB-26001 251239120649_S01 51_251239120649_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.3.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip normal na na na na na na na na T55 organism_part Homo sapiens female mammary gland invasive ductal carcinoma T1 3 N0 Yes Yes Basal Yes No P-MTAB-26004 P-MTAB-25998 T55 RNA total_RNA P-MTAB-25999 T55 RNA Cy5 Cy5 synthetic_RNA P-MTAB-26000 T55 Cy5 UHR Cy3 hyb A-AGIL-11 251239151452 P-MTAB-26001 251239151452_S01 55_251239151452_S01_GE2-v4_91.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.3.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip invasive ductal carcinoma T1 3 N0 Yes Yes Basal Yes No UHR total_RNA Homo sapiens female mammary gland normal na na na na na na na na P-MTAB-25999 UHR Cy3 Cy3 synthetic_RNA P-MTAB-26000 T55 Cy5 UHR Cy3 hyb A-AGIL-11 251239151452 P-MTAB-26001 251239151452_S01 55_251239151452_S01_GE2-v4_91.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.3.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip normal na na na na na na na na T62 organism_part Homo sapiens female mammary gland invasive ductal carcinoma T2 3 N2 No No ERBB2 Yes No P-MTAB-26004 P-MTAB-25998 T62 RNA total_RNA P-MTAB-25999 T62 RNA Cy5 Cy5 synthetic_RNA P-MTAB-26000 T62 Cy5 UHR Cy3 hyb A-AGIL-11 251239120558 P-MTAB-26001 251239120558_S01 62_251239120558_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.3.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip invasive ductal carcinoma T2 3 N2 No No ERBB2 Yes No UHR total_RNA Homo sapiens female mammary gland normal na na na na na na na na P-MTAB-25999 UHR Cy3 Cy3 synthetic_RNA P-MTAB-26000 T62 Cy5 UHR Cy3 hyb A-AGIL-11 251239120558 P-MTAB-26001 251239120558_S01 62_251239120558_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.3.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip normal na na na na na na na na T69 organism_part Homo sapiens female mammary gland invasive ductal carcinoma T1 2 N0 Yes Yes LumA Yes Yes P-MTAB-26004 P-MTAB-25998 T69 RNA total_RNA P-MTAB-25999 T69 RNA Cy5 Cy5 synthetic_RNA P-MTAB-26000 T69 Cy5 UHR Cy3 hyb A-AGIL-11 251239151386 P-MTAB-26001 251239151386_S01 69_251239151386_S01_GE2-v4_91.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.3.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip invasive ductal carcinoma T1 2 N0 Yes Yes LumA Yes Yes UHR total_RNA Homo sapiens female mammary gland normal na na na na na na na na P-MTAB-25999 UHR Cy3 Cy3 synthetic_RNA P-MTAB-26000 T69 Cy5 UHR Cy3 hyb A-AGIL-11 251239151386 P-MTAB-26001 251239151386_S01 69_251239151386_S01_GE2-v4_91.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.3.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip normal na na na na na na na na T73 organism_part Homo sapiens female mammary gland invasive ductal carcinoma T1 2 N0 Yes Yes LumB Yes No P-MTAB-26004 P-MTAB-25998 T73 RNA total_RNA P-MTAB-25999 T73 RNA Cy5 Cy5 synthetic_RNA P-MTAB-26000 T73 Cy5 UHR Cy3 hyb A-AGIL-11 251239120634 P-MTAB-26001 251239120634_S01 73_251239120634_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.3.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip invasive ductal carcinoma T1 2 N0 Yes Yes LumB Yes No UHR total_RNA Homo sapiens female mammary gland normal na na na na na na na na P-MTAB-25999 UHR Cy3 Cy3 synthetic_RNA P-MTAB-26000 T73 Cy5 UHR Cy3 hyb A-AGIL-11 251239120634 P-MTAB-26001 251239120634_S01 73_251239120634_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.3.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip normal na na na na na na na na T78 organism_part Homo sapiens female mammary gland invasive ductal carcinoma T1 2 N0 Yes Yes Normal No No P-MTAB-26004 P-MTAB-25998 T78 RNA total_RNA P-MTAB-25999 T78 RNA Cy5 Cy5 synthetic_RNA P-MTAB-26000 T78 Cy5 UHR Cy3 hyb A-AGIL-11 251239151438 P-MTAB-26001 251239151438_S01 78_251239151438_S01_GE2-v4_91.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.3.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip invasive ductal carcinoma T1 2 N0 Yes Yes Normal No No UHR total_RNA Homo sapiens female mammary gland normal na na na na na na na na P-MTAB-25999 UHR Cy3 Cy3 synthetic_RNA P-MTAB-26000 T78 Cy5 UHR Cy3 hyb A-AGIL-11 251239151438 P-MTAB-26001 251239151438_S01 78_251239151438_S01_GE2-v4_91.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.3.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip normal na na na na na na na na T81 organism_part Homo sapiens female mammary gland invasive ductal carcinoma T2 2 N1 Yes Yes Unclassified Yes No P-MTAB-26004 P-MTAB-25998 T81 RNA total_RNA P-MTAB-25999 T81 RNA Cy5 Cy5 synthetic_RNA P-MTAB-26000 T81 Cy5 UHR Cy3 hyb A-AGIL-11 251239149862 P-MTAB-26001 251239149862_S01 81_251239149862_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.3.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip invasive ductal carcinoma T2 2 N1 Yes Yes Unclassified Yes No UHR total_RNA Homo sapiens female mammary gland normal na na na na na na na na P-MTAB-25999 UHR Cy3 Cy3 synthetic_RNA P-MTAB-26000 T81 Cy5 UHR Cy3 hyb A-AGIL-11 251239149862 P-MTAB-26001 251239149862_S01 81_251239149862_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.3.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip normal na na na na na na na na T83 organism_part Homo sapiens female mammary gland invasive ductal carcinoma T1 3 N1 Yes Yes LumB Yes No P-MTAB-26004 P-MTAB-25998 T83 RNA total_RNA P-MTAB-25999 T83 RNA Cy5 Cy5 synthetic_RNA P-MTAB-26000 T83 Cy5 UHR Cy3 hyb A-AGIL-11 251239120632 P-MTAB-26001 251239120632_S01 83_251239120632_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.3.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip invasive ductal carcinoma T1 3 N1 Yes Yes LumB Yes No UHR total_RNA Homo sapiens female mammary gland normal na na na na na na na na P-MTAB-25999 UHR Cy3 Cy3 synthetic_RNA P-MTAB-26000 T83 Cy5 UHR Cy3 hyb A-AGIL-11 251239120632 P-MTAB-26001 251239120632_S01 83_251239120632_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.3.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip normal na na na na na na na na T84 organism_part Homo sapiens female mammary gland invasive ductal carcinoma T1 2 N0 Yes Yes Normal No No P-MTAB-26004 P-MTAB-25998 T84 RNA total_RNA P-MTAB-25999 T84 RNA Cy5 Cy5 synthetic_RNA P-MTAB-26000 T84 Cy5 UHR Cy3 hyb A-AGIL-11 251239120648 P-MTAB-26001 251239120648_S01 84_251239120648_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.3.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip invasive ductal carcinoma T1 2 N0 Yes Yes Normal No No UHR total_RNA Homo sapiens female mammary gland normal na na na na na na na na P-MTAB-25999 UHR Cy3 Cy3 synthetic_RNA P-MTAB-26000 T84 Cy5 UHR Cy3 hyb A-AGIL-11 251239120648 P-MTAB-26001 251239120648_S01 84_251239120648_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.3.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip normal na na na na na na na na T94 organism_part Homo sapiens female mammary gland invasive ductal carcinoma T1 3 N0 Yes No LumB Yes Yes P-MTAB-26004 P-MTAB-25998 T94 RNA total_RNA P-MTAB-25999 T94 RNA Cy5 Cy5 synthetic_RNA P-MTAB-26000 T94 Cy5 UHR Cy3 hyb A-AGIL-11 251239119905 P-MTAB-26001 251239119905_S01 94_251239119905_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.3.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip invasive ductal carcinoma T1 3 N0 Yes No LumB Yes Yes UHR total_RNA Homo sapiens female mammary gland normal na na na na na na na na P-MTAB-25999 UHR Cy3 Cy3 synthetic_RNA P-MTAB-26000 T94 Cy5 UHR Cy3 hyb A-AGIL-11 251239119905 P-MTAB-26001 251239119905_S01 94_251239119905_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.3.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip normal na na na na na na na na T99 organism_part Homo sapiens female mammary gland invasive ductal carcinoma T2 3 N0 No No Basal Yes No P-MTAB-26004 P-MTAB-25998 T99 RNA total_RNA P-MTAB-25999 T99 RNA Cy5 Cy5 synthetic_RNA P-MTAB-26000 T99 Cy5 UHR Cy3 hyb A-AGIL-11 251239119906 P-MTAB-26001 251239119906_S01 99_251239119906_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.3.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip invasive ductal carcinoma T2 3 N0 No No Basal Yes No UHR total_RNA Homo sapiens female mammary gland normal na na na na na na na na P-MTAB-25999 UHR Cy3 Cy3 synthetic_RNA P-MTAB-26000 T99 Cy5 UHR Cy3 hyb A-AGIL-11 251239119906 P-MTAB-26001 251239119906_S01 99_251239119906_S01_GE2_44k_1005.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.raw.3.zip P-MTAB-26002 P-MTAB-26003 T1_T2_Normalized_Data.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-1049/E-MTAB-1049.processed.1.zip normal na na na na na na na na