Source Name Characteristics [StrainOrLine] Characteristics [Organism] Protocol REF Sample Name Protocol REF Extract Name Material Type Protocol REF Labeled Extract Name Label Material Type Protocol REF Hybridization Name Array Design REF Protocol REF Factor Value [strain] Factor Value [growth_condition] Term Source REF Term Accession Number Scan Name Array Data File Comment [ArrayExpress FTP file] Protocol REF Derived Array Data Matrix File Comment [Derived ArrayExpress FTP file] VU2 ABU strain VR50 Escherichia coli P-MEXP-21150 VU2 P-MEXP-20170 E_VU2 total_RNA P-AFFY-2 L_VU2 biotin total_RNA Affymetrix:Protocol:Hybridization-Unknown H_VU2 A-AFFY-56 P-AFFY-6 ABU strain VR50 urine EFO EFO_0001939 H_VU2 060322_VU2.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-926/E-MEXP-926.raw.1.zip P-MEXP-36314 BF_alla_expression_matrix._txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-926/E-MEXP-926.processed.1.zip VM3 ABU strain VR50 Escherichia coli P-MEXP-21149 VM3 P-MEXP-20170 E_VM3 total_RNA P-AFFY-2 L_VM3 biotin total_RNA Affymetrix:Protocol:Hybridization-Unknown H_VM3 A-AFFY-56 P-AFFY-6 ABU strain VR50 MOPS-glucose H_VM3 060324_VM3.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-926/E-MEXP-926.raw.1.zip P-MEXP-36314 BF_alla_expression_matrix._txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-926/E-MEXP-926.processed.1.zip VU1 ABU strain VR50 Escherichia coli P-MEXP-21150 VU1 P-MEXP-20170 E_VU1 total_RNA P-AFFY-2 L_VU1 biotin total_RNA Affymetrix:Protocol:Hybridization-Unknown H_VU1 A-AFFY-56 P-AFFY-6 ABU strain VR50 urine EFO EFO_0001939 H_VU1 060322_VU1.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-926/E-MEXP-926.raw.1.zip P-MEXP-36314 BF_alla_expression_matrix._txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-926/E-MEXP-926.processed.1.zip VB2 ABU strain VR50 Escherichia coli P-MEXP-36217 VB2 P-MEXP-20170 E_VB2 total_RNA P-AFFY-2 L_VB2 biotin total_RNA Affymetrix:Protocol:Hybridization-Unknown H_VB2 A-AFFY-56 P-AFFY-6 ABU strain VR50 urine biofilm H_VB2 060322_VB2.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-926/E-MEXP-926.raw.1.zip P-MEXP-36314 BF_alla_expression_matrix._txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-926/E-MEXP-926.processed.1.zip AU1 ABU strain 83972 Escherichia coli P-MEXP-21150 AU1 P-MEXP-20170 E_AU1 total_RNA P-AFFY-2 L_AU1 biotin total_RNA Affymetrix:Protocol:Hybridization-Unknown H_AU1 A-AFFY-56 P-AFFY-6 ABU strain 83972 urine EFO EFO_0001939 H_AU1 050124_AU1.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-926/E-MEXP-926.raw.1.zip P-MEXP-36314 BF_alla_expression_matrix._txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-926/E-MEXP-926.processed.1.zip VB3 ABU strain VR50 Escherichia coli P-MEXP-36217 VB3 P-MEXP-20170 E_VB3 total_RNA P-AFFY-2 L_VB3 biotin total_RNA Affymetrix:Protocol:Hybridization-Unknown H_VB3 A-AFFY-56 P-AFFY-6 ABU strain VR50 urine biofilm H_VB3 060322_VB3.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-926/E-MEXP-926.raw.1.zip P-MEXP-36314 BF_alla_expression_matrix._txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-926/E-MEXP-926.processed.1.zip AM3 ABU strain 83972 Escherichia coli P-MEXP-21149 AM3 P-MEXP-20170 E_AM3 total_RNA P-AFFY-2 L_AM3 biotin total_RNA Affymetrix:Protocol:Hybridization-Unknown H_AM3 A-AFFY-56 P-AFFY-6 ABU strain 83972 MOPS-glucose H_AM3 050126_AM3.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-926/E-MEXP-926.raw.1.zip P-MEXP-36314 BF_alla_expression_matrix._txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-926/E-MEXP-926.processed.1.zip VU3 ABU strain VR50 Escherichia coli P-MEXP-21150 VU3 P-MEXP-20170 E_VU3 total_RNA P-AFFY-2 L_VU3 biotin total_RNA Affymetrix:Protocol:Hybridization-Unknown H_VU3 A-AFFY-56 P-AFFY-6 ABU strain VR50 urine EFO EFO_0001939 H_VU3 060322_VU3.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-926/E-MEXP-926.raw.1.zip P-MEXP-36314 BF_alla_expression_matrix._txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-926/E-MEXP-926.processed.1.zip AM2 ABU strain 83972 Escherichia coli P-MEXP-21149 AM2 P-MEXP-20170 E_AM2 total_RNA P-AFFY-2 L_AM2 biotin total_RNA Affymetrix:Protocol:Hybridization-Unknown H_AM2 A-AFFY-56 P-AFFY-6 ABU strain 83972 MOPS-glucose H_AM2 050126_AM2.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-926/E-MEXP-926.raw.1.zip P-MEXP-36314 BF_alla_expression_matrix._txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-926/E-MEXP-926.processed.1.zip VB1 ABU strain VR50 Escherichia coli P-MEXP-36217 VB1 P-MEXP-20170 E_VB1 total_RNA P-AFFY-2 L_VB1 biotin total_RNA Affymetrix:Protocol:Hybridization-Unknown H_VB1 A-AFFY-56 P-AFFY-6 ABU strain VR50 urine biofilm H_VB1 060322_VB1.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-926/E-MEXP-926.raw.1.zip P-MEXP-36314 BF_alla_expression_matrix._txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-926/E-MEXP-926.processed.1.zip AM1 ABU strain 83972 Escherichia coli P-MEXP-21149 AM1 P-MEXP-20170 E_AM1 total_RNA P-AFFY-2 L_AM1 biotin total_RNA Affymetrix:Protocol:Hybridization-Unknown H_AM1 A-AFFY-56 P-AFFY-6 ABU strain 83972 MOPS-glucose H_AM1 050126_AM1.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-926/E-MEXP-926.raw.1.zip P-MEXP-36314 BF_alla_expression_matrix._txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-926/E-MEXP-926.processed.1.zip AB1 ABU strain 83972 Escherichia coli P-MEXP-36217 AB1 P-MEXP-20170 E_AB1 total_RNA P-AFFY-2 L_AB1 biotin total_RNA Affymetrix:Protocol:Hybridization-Unknown H_AB1 A-AFFY-56 P-AFFY-6 ABU strain 83972 urine biofilm H_AB1 060322_AB1.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-926/E-MEXP-926.raw.1.zip P-MEXP-36314 BF_alla_expression_matrix._txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-926/E-MEXP-926.processed.1.zip AU2 ABU strain 83972 Escherichia coli P-MEXP-21150 AU2 P-MEXP-20170 E_AU2 total_RNA P-AFFY-2 L_AU2 biotin total_RNA Affymetrix:Protocol:Hybridization-Unknown H_AU2 A-AFFY-56 P-AFFY-6 ABU strain 83972 urine EFO EFO_0001939 H_AU2 050124_AU2.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-926/E-MEXP-926.raw.1.zip P-MEXP-36314 BF_alla_expression_matrix._txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-926/E-MEXP-926.processed.1.zip AU3 ABU strain 83972 Escherichia coli P-MEXP-21150 AU3 P-MEXP-20170 E_AU3 total_RNA P-AFFY-2 L_AU3 biotin total_RNA Affymetrix:Protocol:Hybridization-Unknown H_AU3 A-AFFY-56 P-AFFY-6 ABU strain 83972 urine EFO EFO_0001939 H_AU3 050124_AU3.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-926/E-MEXP-926.raw.1.zip P-MEXP-36314 BF_alla_expression_matrix._txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-926/E-MEXP-926.processed.1.zip VM1 ABU strain VR50 Escherichia coli P-MEXP-21149 VM1 P-MEXP-20170 E_VM1 total_RNA P-AFFY-2 L_VM1 biotin total_RNA Affymetrix:Protocol:Hybridization-Unknown H_VM1 A-AFFY-56 P-AFFY-6 ABU strain VR50 MOPS-glucose H_VM1 060324_VM1.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-926/E-MEXP-926.raw.1.zip P-MEXP-36314 BF_alla_expression_matrix._txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-926/E-MEXP-926.processed.1.zip VM2 ABU strain VR50 Escherichia coli P-MEXP-21149 VM2 P-MEXP-20170 E_VM2 total_RNA P-AFFY-2 L_VM2 biotin total_RNA Affymetrix:Protocol:Hybridization-Unknown H_VM2 A-AFFY-56 P-AFFY-6 ABU strain VR50 MOPS-glucose H_VM2 060324_VM2.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-926/E-MEXP-926.raw.1.zip P-MEXP-36314 BF_alla_expression_matrix._txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-926/E-MEXP-926.processed.1.zip AB2 ABU strain 83972 Escherichia coli P-MEXP-36217 AB2 P-MEXP-20170 E_AB2 total_RNA P-AFFY-2 L_AB2 biotin total_RNA Affymetrix:Protocol:Hybridization-Unknown H_AB2 A-AFFY-56 P-AFFY-6 ABU strain 83972 urine biofilm H_AB2 060322_AB2.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-926/E-MEXP-926.raw.1.zip P-MEXP-36314 BF_alla_expression_matrix._txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-926/E-MEXP-926.processed.1.zip AB3 ABU strain 83972 Escherichia coli P-MEXP-36217 AB3 P-MEXP-20170 E_AB3 total_RNA P-AFFY-2 L_AB3 biotin total_RNA Affymetrix:Protocol:Hybridization-Unknown H_AB3 A-AFFY-56 P-AFFY-6 ABU strain 83972 urine biofilm H_AB3 060322_AB3.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-926/E-MEXP-926.raw.1.zip P-MEXP-36314 BF_alla_expression_matrix._txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-926/E-MEXP-926.processed.1.zip