Source Name Characteristics [Age] Characteristics [TimeUnit] Characteristics [InitialTimePoint] Characteristics [GeneticModification] Characteristics [DevelopmentalStage] Term Source REF Term Accession Number Characteristics [Genotype] Characteristics [BioSourceType] Characteristics [Organism] Term Source REF Term Accession Number Characteristics [Ecotype] Provider Protocol REF Sample Name Protocol REF Parameter Value [Extracted product] Parameter Value [Amplification] Protocol REF Extract Name Material Type Protocol REF Parameter Value [Amplification] Parameter Value [Amount of nucleic acid labeled] Parameter Value [Label used] Labeled Extract Name Label Material Type Protocol REF Parameter Value [temperature] Unit [TemperatureUnit] Parameter Value [time] Unit [TimeUnit] Parameter Value [Volume] Unit [VolumeUnit] Parameter Value [Chamber type] Parameter Value [Quantity of label target used] Unit [MassUnit] Hybridization Name Array Design REF Protocol REF Factor Value [individual_genetic_characteristic] Scan Name Array Data File Comment [ArrayExpress FTP file] BLR-OX c 7 days germination gene_knock_in seedling EFO EFO_0001992 CaMV 35S BLR-OX frozen_sample Arabidopsis thaliana EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_3702 Lucy Moore P-MEXP-28141 BLR-OX c P-MEXP-28143 total RNA none P-MEXP-28142 E_BLR-OX c total_RNA P-MEXP-9542 none 1 Cy3 L_BLR-OX c Cy3 total_RNA P-MEXP-28145 55 degree_C 16 h 74 uL other[Lifterslip] 2 ug H_Col-0 c_BLR-OX c A-MEXP-555 P-MEXP-8567 CaMV 35S BLR-OX H_Col-0 c_BLR-OX c 072_output.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-852/E-MEXP-852.raw.1.zip Col-0 c 6 days germination seedling EFO EFO_0001992 wild_type frozen_sample Arabidopsis thaliana EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_3702 Columbia-0 Lucy Moore P-MEXP-28141 Col-0 c P-MEXP-28143 total RNA none P-MEXP-28142 E_Col-0 c total_RNA P-MEXP-9543 none 1 Cy5 L_Col-0 c Cy5 total_RNA P-MEXP-28145 55 degree_C 16 h 74 uL other[Lifterslip] 2 ug H_Col-0 c_BLR-OX c A-MEXP-555 P-MEXP-8567 wild_type H_Col-0 c_BLR-OX c 072_output.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-852/E-MEXP-852.raw.1.zip BLR-OX a 7 days germination gene_knock_in seedling EFO EFO_0001992 CaMV 35S BLR-OX frozen_sample Arabidopsis thaliana EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_3702 Lucy Moore P-MEXP-28141 BLR-OX a P-MEXP-28143 total RNA none P-MEXP-28142 E_BLR-OX a total_RNA P-MEXP-9542 none 1 Cy3 L_BLR-OX a Cy3 total_RNA P-MEXP-28145 55 degree_C 16 h 74 uL other[Lifterslip] 2 ug H_Col-0 a_BLR-OX a A-MEXP-555 P-MEXP-8567 CaMV 35S BLR-OX H_Col-0 a_BLR-OX a 070_output.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-852/E-MEXP-852.raw.1.zip Col-0 a 6 days germination seedling EFO EFO_0001992 wild_type frozen_sample Arabidopsis thaliana EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_3702 Columbia-0 Lucy Moore P-MEXP-28141 Col-0 a P-MEXP-28143 total RNA none P-MEXP-28142 E_Col-0 a total_RNA P-MEXP-9543 none 1 Cy5 L_Col-0 a Cy5 total_RNA P-MEXP-28145 55 degree_C 16 h 74 uL other[Lifterslip] 2 ug H_Col-0 a_BLR-OX a A-MEXP-555 P-MEXP-8567 wild_type H_Col-0 a_BLR-OX a 070_output.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-852/E-MEXP-852.raw.1.zip BLR-OX b 7 days germination gene_knock_in seedling EFO EFO_0001992 CaMV 35S BLR-OX frozen_sample Arabidopsis thaliana EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_3702 Lucy Moore P-MEXP-28141 BLR-OX b P-MEXP-28143 total RNA none P-MEXP-28142 E_BLR-OX b total_RNA P-MEXP-9543 none 1 Cy5 L_BLR-OX b Cy5 total_RNA P-MEXP-28145 55 degree_C 16 h 74 uL other[Lifterslip] 2 ug H_Col-0 b_BLR-OX b A-MEXP-555 P-MEXP-8567 CaMV 35S BLR-OX H_Col-0 b_BLR-OX b 071_output.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-852/E-MEXP-852.raw.1.zip Col-0 b 6 days germination seedling EFO EFO_0001992 wild_type frozen_sample Arabidopsis thaliana EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_3702 Columbia-0 Lucy Moore P-MEXP-28141 Col-0 b P-MEXP-28143 total RNA none P-MEXP-28142 E_Col-0 b total_RNA P-MEXP-9542 none 1 Cy3 L_Col-0 b Cy3 total_RNA P-MEXP-28145 55 degree_C 16 h 74 uL other[Lifterslip] 2 ug H_Col-0 b_BLR-OX b A-MEXP-555 P-MEXP-8567 wild_type H_Col-0 b_BLR-OX b 071_output.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-852/E-MEXP-852.raw.1.zip