Source Name Comment [Sample_description] Comment [Sample_description] Comment [Sample_source_name] Comment [Sample_title] Characteristics[Organism] Characteristics[strain name] Protocol REF Protocol REF Protocol REF Extract Name Material Type Protocol REF Labeled Extract Name Label Protocol REF Hybridization Name Array Design REF Term Source REF Protocol REF Protocol REF Protocol REF Normalization Name Derived Array Data File Comment [Derived ArrayExpress FTP file] FactorValue [STRAIN NAME] FactorValue [TREATMENT] Term Source REF Term Accession Number GSM886378 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75615.gif KCN 0.5mM 20m and 0.05mM DNO 40mn MTB strain 1254 Ctrl vs 0.5 mM KCN 20min + 0.05 mM DETA/NO 40min rep 2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886378 extract 2 total RNA P-GSE8839-5 GSM886378 LE 2 Cy5 P-GSE8839-6 GSM886378 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886378_sample_table.txt norm GSM886378_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.5mM Potassium cyanide plus 40 min. 0.05mM DNO GSM886378 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75615.gif 1254 No treatment MTB strain 1254 Ctrl vs 0.5 mM KCN 20min + 0.05 mM DETA/NO 40min rep 2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886378 extract 1 total RNA P-GSE8839-5 GSM886378 LE 1 Cy3 P-GSE8839-6 GSM886378 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886378_sample_table.txt norm GSM886378_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886377 1 Simple annotation: Stress, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2001-07/18438.gif Strain: MTB strain 1254 Treatment: Control MTB strain 1254 Ctrl vs 0.05 mM DETA/NO 40min rep 1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886377 extract 1 total RNA P-GSE8839-5 GSM886377 LE 1 Cy3 P-GSE8839-6 GSM886377 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886377_sample_table.txt norm GSM886377_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886377 2 Simple annotation: Stress, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2001-07/18438.gif Strain: MTB strain 1254 Treatment: 0.05 mM DETA/NO for 40min MTB strain 1254 Ctrl vs 0.05 mM DETA/NO 40min rep 1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886377 extract 2 total RNA P-GSE8839-5 GSM886377 LE 2 Cy5 P-GSE8839-6 GSM886377 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886377_sample_table.txt norm GSM886377_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.05mM of diethylenetriamine/nitric oxide for 40 minutes GSM886376 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75599.gif 0.5mM DNO 20 min MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 20min rep 1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886376 extract 2 total RNA P-GSE8839-5 GSM886376 LE 2 Cy5 P-GSE8839-6 GSM886376 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886376_sample_table.txt norm GSM886376_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.5mM of diethylenetriamine/nitric oxide for 20 minutes GSM886376 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75599.gif 1254 No treatment MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 20min rep 1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886376 extract 1 total RNA P-GSE8839-5 GSM886376 LE 1 Cy3 P-GSE8839-6 GSM886376 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886376_sample_table.txt norm GSM886376_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886375 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75646.gif CDC1551 0.05DNO 40min CDC1551 Ctrl vs 0.05 mM DETA/NO 40 min rep 1 Mycobacterium tuberculosis CDC1551 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886375 extract 2 total RNA P-GSE8839-5 GSM886375 LE 2 Cy5 P-GSE8839-6 GSM886375 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886375_sample_table.txt norm GSM886375_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip CDC1551 (wild_type) 0.05mM of diethylenetriamine/nitric oxide for 40 minutes GSM886375 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75646.gif CDC1551 No treatment CDC1551 Ctrl vs 0.05 mM DETA/NO 40 min rep 1 Mycobacterium tuberculosis CDC1551 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886375 extract 1 total RNA P-GSE8839-5 GSM886375 LE 1 Cy3 P-GSE8839-6 GSM886375 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886375_sample_table.txt norm GSM886375_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip CDC1551 (wild_type) control EFO EFO_0001461 GSM886374 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19136.gif Rv 0.05mM DNO 40m H37Rv Ctrl vs 0.05 mM DETA/NO 40min rep 2 Mycobacterium tuberculosis H37Rv (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886374 extract 2 total RNA P-GSE8839-5 GSM886374 LE 2 Cy5 P-GSE8839-6 GSM886374 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886374_sample_table.txt norm GSM886374_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv (wild_type) 0.05mM of diethylenetriamine/nitric oxide for 40 minutes GSM886374 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19136.gif Control H37Rv Ctrl vs 0.05 mM DETA/NO 40min rep 2 Mycobacterium tuberculosis H37Rv (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886374 extract 1 total RNA P-GSE8839-5 GSM886374 LE 1 Cy3 P-GSE8839-6 GSM886374 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886374_sample_table.txt norm GSM886374_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv (wild_type) control EFO EFO_0001461 GSM886373 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75620.gif 1254 No treatment MTB strain 1254 Ctrl vs 2hr Hypoxia rep 3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886373 extract 1 total RNA P-GSE8839-5 GSM886373 LE 1 Cy3 P-GSE8839-6 GSM886373 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886373_sample_table.txt norm GSM886373_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886373 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75620.gif GasPak 2h 1256 MTB strain 1254 Ctrl vs 2hr Hypoxia rep 3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886373 extract 2 total RNA P-GSE8839-5 GSM886373 LE 2 Cy5 P-GSE8839-6 GSM886373 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886373_sample_table.txt norm GSM886373_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) Exposing for 2 hour to 0.2% O2 (hypoxia) GSM886372 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75610.gif 1254 No treatment MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 24hrs + 0.5 mM DNO 40min rep 4 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886372 extract 1 total RNA P-GSE8839-5 GSM886372 LE 1 Cy3 P-GSE8839-6 GSM886372 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886372_sample_table.txt norm GSM886372_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886372 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75610.gif 0.5mM DNO 24h + 0.05mM DNO 40min MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 24hrs + 0.5 mM DNO 40min rep 4 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886372 extract 2 total RNA P-GSE8839-5 GSM886372 LE 2 Cy5 P-GSE8839-6 GSM886372 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886372_sample_table.txt norm GSM886372_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.5mM of diethylenetriamine/nitric oxide for 24 hours + 0.05mM DNO 40 min GSM886371 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75594.gif 0.5mM DNO 8h MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 8hrs rep 4 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886371 extract 2 total RNA P-GSE8839-5 GSM886371 LE 2 Cy5 P-GSE8839-6 GSM886371 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886371_sample_table.txt norm GSM886371_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.5mM of diethylenetriamine/nitric oxide for 8 hours GSM886371 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75594.gif 1254 No treatment MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 8hrs rep 4 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886371 extract 1 total RNA P-GSE8839-5 GSM886371 LE 1 Cy3 P-GSE8839-6 GSM886371 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886371_sample_table.txt norm GSM886371_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886370 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75654.gif H37Rv No treatment H37 Rv3132-34 KO 0 days vs Rv3132-34 KO (complemented) hypoxia 4 day rep 1 Mycobacterium tuberculosis H37Rv-Delta-dosR::kan plus DosR P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886370 extract 1 total RNA P-GSE8839-5 GSM886370 LE 1 Cy3 P-GSE8839-6 GSM886370 A-GEOD-9901 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886370_sample_table.txt norm GSM886370_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv-Delta-dosR::kan plus DosR control EFO EFO_0001461 GSM886370 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75654.gif CO NRP Day 4 H37 Rv3132-34 KO 0 days vs Rv3132-34 KO (complemented) hypoxia 4 day rep 1 Mycobacterium tuberculosis H37Rv-Delta-dosR::kan plus DosR P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886370 extract 2 total RNA P-GSE8839-5 GSM886370 LE 2 Cy5 P-GSE8839-6 GSM886370 A-GEOD-9901 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886370_sample_table.txt norm GSM886370_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv-Delta-dosR::kan plus DosR NRP (Wayne Growth)/4 days GSM886369 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75607.gif 0.5mMDNO24h+0.05mMDNO40min MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 24hrs + 0.5 mM DNO 40min rep 1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886369 extract 2 total RNA P-GSE8839-5 GSM886369 LE 2 Cy5 P-GSE8839-6 GSM886369 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886369_sample_table.txt norm GSM886369_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.5mM of diethylenetriamine/nitric oxide for 24 hours + 0.05mM DNO 40 min GSM886369 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75607.gif 1254 No treatment MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 24hrs + 0.5 mM DNO 40min rep 1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886369 extract 1 total RNA P-GSE8839-5 GSM886369 LE 1 Cy3 P-GSE8839-6 GSM886369 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886369_sample_table.txt norm GSM886369_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886368 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75657.gif CO NRP Day 4 H37 Rv3132-34 KO 0 days vs Rv3132-34 KO (complemented) hypoxia 4 day rep 4 Mycobacterium tuberculosis H37Rv-Delta-dosR::kan plus DosR P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886368 extract 2 total RNA P-GSE8839-5 GSM886368 LE 2 Cy5 P-GSE8839-6 GSM886368 A-GEOD-9901 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886368_sample_table.txt norm GSM886368_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv-Delta-dosR::kan plus DosR NRP (Wayne Growth)/4 days GSM886368 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75657.gif H37Rv No treatment H37 Rv3132-34 KO 0 days vs Rv3132-34 KO (complemented) hypoxia 4 day rep 4 Mycobacterium tuberculosis H37Rv-Delta-dosR::kan plus DosR P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886368 extract 1 total RNA P-GSE8839-5 GSM886368 LE 1 Cy3 P-GSE8839-6 GSM886368 A-GEOD-9901 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886368_sample_table.txt norm GSM886368_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv-Delta-dosR::kan plus DosR control EFO EFO_0001461 GSM886367 1 Simple annotation: Stress, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/74762.gif Strain: MTB strain 1254 Treatment: Control MTB strain 1254 Ctrl vs 5.0 mM DETA/NO 40min rep 1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886367 extract 1 total RNA P-GSE8839-5 GSM886367 LE 1 Cy3 P-GSE8839-6 GSM886367 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886367_sample_table.txt norm GSM886367_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886367 2 Simple annotation: Stress, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/74762.gif Strain: MTB strain 1254 Treatment: 5.0 mM DETA/NO for 40min MTB strain 1254 Ctrl vs 5.0 mM DETA/NO 40min rep 1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886367 extract 2 total RNA P-GSE8839-5 GSM886367 LE 2 Cy5 P-GSE8839-6 GSM886367 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886367_sample_table.txt norm GSM886367_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 5.0mM of diethylenetriamine/nitric oxide for 40 minutes GSM886366 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75647.gif CDC1551 No treatment CDC1551 Ctrl vs 0.05 mM DETA/NO 40 min rep 2 Mycobacterium tuberculosis CDC1551 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886366 extract 1 total RNA P-GSE8839-5 GSM886366 LE 1 Cy3 P-GSE8839-6 GSM886366 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886366_sample_table.txt norm GSM886366_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip CDC1551 (wild_type) control EFO EFO_0001461 GSM886366 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75647.gif CDC1551 0.05 DNO 40min CDC1551 Ctrl vs 0.05 mM DETA/NO 40 min rep 2 Mycobacterium tuberculosis CDC1551 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886366 extract 2 total RNA P-GSE8839-5 GSM886366 LE 2 Cy5 P-GSE8839-6 GSM886366 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886366_sample_table.txt norm GSM886366_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip CDC1551 (wild_type) 0.05mM of diethylenetriamine/nitric oxide for 40 minutes GSM886365 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75622.gif High aeration and 0.001mMDNO MTB strain 1254 Ctrl vs high aeration + 0.001 mM DETA/NO rep 3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886365 extract 2 total RNA P-GSE8839-5 GSM886365 LE 2 Cy5 P-GSE8839-6 GSM886365 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886365_sample_table.txt norm GSM886365_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.001 mM of diethylenetriamine/nitric oxide GSM886365 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75622.gif 1254 No treatment MTB strain 1254 Ctrl vs high aeration + 0.001 mM DETA/NO rep 3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886365 extract 1 total RNA P-GSE8839-5 GSM886365 LE 1 Cy3 P-GSE8839-6 GSM886365 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886365_sample_table.txt norm GSM886365_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886364 1 Simple annotation: Stress, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/74758.gif Strain: MTB strain 1254 Treatment: Control MTB strain 1254 Ctrl vs 0.05 mM DETA/NO 40min rep 7 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886364 extract 1 total RNA P-GSE8839-5 GSM886364 LE 1 Cy3 P-GSE8839-6 GSM886364 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886364_sample_table.txt norm GSM886364_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886364 2 Simple annotation: Stress, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/74758.gif Strain: MTB strain 1254 Treatment: 0.05 mM DETA/NO for 40min MTB strain 1254 Ctrl vs 0.05 mM DETA/NO 40min rep 7 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886364 extract 2 total RNA P-GSE8839-5 GSM886364 LE 2 Cy5 P-GSE8839-6 GSM886364 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886364_sample_table.txt norm GSM886364_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.05mM of diethylenetriamine/nitric oxide for 40 minutes GSM886363 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75612.gif 1254 No treatment MTB strain 1254 Ctrl vs 0.5 mM KCN 1hr rep 2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886363 extract 1 total RNA P-GSE8839-5 GSM886363 LE 1 Cy3 P-GSE8839-6 GSM886363 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886363_sample_table.txt norm GSM886363_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886363 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75612.gif KCN 0.5mM 1h MTB strain 1254 Ctrl vs 0.5 mM KCN 1hr rep 2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886363 extract 2 total RNA P-GSE8839-5 GSM886363 LE 2 Cy5 P-GSE8839-6 GSM886363 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886363_sample_table.txt norm GSM886363_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.5mM Potassium cyanide 1 hour GSM886362 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75590.gif 1254 No treatment MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 5min rep 4 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886362 extract 1 total RNA P-GSE8839-5 GSM886362 LE 1 Cy3 P-GSE8839-6 GSM886362 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886362_sample_table.txt norm GSM886362_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886362 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75590.gif 0.5mM DNO 5min MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 5min rep 4 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886362 extract 2 total RNA P-GSE8839-5 GSM886362 LE 2 Cy5 P-GSE8839-6 GSM886362 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886362_sample_table.txt norm GSM886362_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.5mM of diethylenetriamine/nitric oxide for 5 minutes GSM886361 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75614.gif KCN0.5mM20mand0.05mMDNO40mn MTB strain 1254 Ctrl vs 0.5 mM KCN 20min + 0.05 mM DETA/NO 40min rep 1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886361 extract 2 total RNA P-GSE8839-5 GSM886361 LE 2 Cy5 P-GSE8839-6 GSM886361 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886361_sample_table.txt norm GSM886361_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.5mM Potassium cyanide plus 40 min. 0.05mM DNO GSM886361 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75614.gif 1254 No treatment MTB strain 1254 Ctrl vs 0.5 mM KCN 20min + 0.05 mM DETA/NO 40min rep 1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886361 extract 1 total RNA P-GSE8839-5 GSM886361 LE 1 Cy3 P-GSE8839-6 GSM886361 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886361_sample_table.txt norm GSM886361_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886360 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75630.gif No treatment MTB strain 1254 Ctrl vs high aeration rep2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886360 extract 2 total RNA P-GSE8839-5 GSM886360 LE 2 Cy5 P-GSE8839-6 GSM886360 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886360_sample_table.txt norm GSM886360_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886360 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75630.gif 1254 No treatment MTB strain 1254 Ctrl vs high aeration rep2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886360 extract 1 total RNA P-GSE8839-5 GSM886360 LE 1 Cy3 P-GSE8839-6 GSM886360 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886360_sample_table.txt norm GSM886360_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886359 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75606.gif 1254 No treatment MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 24hrs rep 4 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886359 extract 1 total RNA P-GSE8839-5 GSM886359 LE 1 Cy3 P-GSE8839-6 GSM886359 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886359_sample_table.txt norm GSM886359_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886359 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75606.gif 0.5mM DNO 24h MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 24hrs rep 4 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886359 extract 2 total RNA P-GSE8839-5 GSM886359 LE 2 Cy5 P-GSE8839-6 GSM886359 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886359_sample_table.txt norm GSM886359_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.5mM of diethylenetriamine/nitric oxide for 24 hours GSM886358 2 Simple annotation: Stress, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19036.gif Strain: MTB strain 1254 Treatment: 1.0 mM DETA/NO for 40min MTB strain 1254 Ctrl vs 1.0 mM DETA/NO 40min rep 1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886358 extract 2 total RNA P-GSE8839-5 GSM886358 LE 2 Cy5 P-GSE8839-6 GSM886358 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886358_sample_table.txt norm GSM886358_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 1.0mM of diethylenetriamine/nitric oxide for 40 minutes GSM886358 1 Simple annotation: Stress, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19036.gif Strain: MTB strain 1254 Treatment: Control MTB strain 1254 Ctrl vs 1.0 mM DETA/NO 40min rep 1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886358 extract 1 total RNA P-GSE8839-5 GSM886358 LE 1 Cy3 P-GSE8839-6 GSM886358 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886358_sample_table.txt norm GSM886358_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886357 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75644.gif 1254 No treatment MTB strain 1254 Ctrl vs low aeration (0.2% oxygen) 2hr rep 2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886357 extract 1 total RNA P-GSE8839-5 GSM886357 LE 1 Cy3 P-GSE8839-6 GSM886357 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886357_sample_table.txt norm GSM886357_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886357 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75644.gif No treatment MTB strain 1254 Ctrl vs low aeration (0.2% oxygen) 2hr rep 2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886357 extract 2 total RNA P-GSE8839-5 GSM886357 LE 2 Cy5 P-GSE8839-6 GSM886357 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886357_sample_table.txt norm GSM886357_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886356 2 Simple annotation: Strain Comparison, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75090.gif MTB1254 Day 0 MTB1254 Day 0 rep 1 Mycobacterium tuberculosis H37Rv (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886356 extract 2 total RNA P-GSE8839-5 GSM886356 LE 2 Cy5 P-GSE8839-6 GSM886356 A-GEOD-9901 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886356_sample_table.txt norm GSM886356_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv (wild_type) Control (Growth curve) 0 days GSM886356 1 Simple annotation: Strain Comparison, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75090.gif MTB1254 Day 0 MTB1254 Day 0 rep 1 Mycobacterium tuberculosis H37Rv (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886356 extract 1 total RNA P-GSE8839-5 GSM886356 LE 1 Cy3 P-GSE8839-6 GSM886356 A-GEOD-9901 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886356_sample_table.txt norm GSM886356_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv (wild_type) control EFO EFO_0001461 GSM886355 2 Simple annotation: Strain Comparison, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75057.gif MTB1254 Day 4 MTB1254 Day 0 vs low Oxygen Day 4 rep 4 Mycobacterium tuberculosis H37Rv (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886355 extract 2 total RNA P-GSE8839-5 GSM886355 LE 2 Cy5 P-GSE8839-6 GSM886355 A-GEOD-9901 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886355_sample_table.txt norm GSM886355_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv (wild_type) NRP (Wayne Growth)/4 days GSM886355 1 Simple annotation: Strain Comparison, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75057.gif MTB1254 Day 0 MTB1254 Day 0 vs low Oxygen Day 4 rep 4 Mycobacterium tuberculosis H37Rv (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886355 extract 1 total RNA P-GSE8839-5 GSM886355 LE 1 Cy3 P-GSE8839-6 GSM886355 A-GEOD-9901 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886355_sample_table.txt norm GSM886355_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv (wild_type) control EFO EFO_0001461 GSM886354 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75636.gif Lowaerationand0.01mMDNO MTB strain 1254 Ctrl vs low aeration + 0.01 mM DETA/NO rep 3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886354 extract 2 total RNA P-GSE8839-5 GSM886354 LE 2 Cy5 P-GSE8839-6 GSM886354 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886354_sample_table.txt norm GSM886354_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.01 mM of diethylenetriamine/nitric oxide GSM886354 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75636.gif 1254 No treatment MTB strain 1254 Ctrl vs low aeration + 0.01 mM DETA/NO rep 3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886354 extract 1 total RNA P-GSE8839-5 GSM886354 LE 1 Cy3 P-GSE8839-6 GSM886354 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886354_sample_table.txt norm GSM886354_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886353 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75588.gif 1254 No treatment MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 5min rep 2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886353 extract 1 total RNA P-GSE8839-5 GSM886353 LE 1 Cy3 P-GSE8839-6 GSM886353 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886353_sample_table.txt norm GSM886353_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886353 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75588.gif 0.5mM DNO 5min MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 5min rep 2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886353 extract 2 total RNA P-GSE8839-5 GSM886353 LE 2 Cy5 P-GSE8839-6 GSM886353 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886353_sample_table.txt norm GSM886353_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.5mM of diethylenetriamine/nitric oxide for 5 minutes GSM886352 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75627.gif Highaerationand0.05mMDNO MTB strain 1254 Ctrl vs high aeration + 0.05 mM DETA/NO rep 2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886352 extract 2 total RNA P-GSE8839-5 GSM886352 LE 2 Cy5 P-GSE8839-6 GSM886352 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886352_sample_table.txt norm GSM886352_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.05 mM of diethylenetriamine/nitric oxide GSM886352 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75627.gif 1254 No treatment MTB strain 1254 Ctrl vs high aeration + 0.05 mM DETA/NO rep 2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886352 extract 1 total RNA P-GSE8839-5 GSM886352 LE 1 Cy3 P-GSE8839-6 GSM886352 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886352_sample_table.txt norm GSM886352_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886351 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75602.gif 0.5mM DNO 20 min MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 20min rep 4 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886351 extract 2 total RNA P-GSE8839-5 GSM886351 LE 2 Cy5 P-GSE8839-6 GSM886351 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886351_sample_table.txt norm GSM886351_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.5mM of diethylenetriamine/nitric oxide for 20 minutes GSM886351 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75602.gif 1254 No treatment MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 20min rep 4 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886351 extract 1 total RNA P-GSE8839-5 GSM886351 LE 1 Cy3 P-GSE8839-6 GSM886351 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886351_sample_table.txt norm GSM886351_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886350 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75634.gif 1254 No treatment MTB strain 1254 Ctrl vs low aeration + 0.01 mM DETA/NO rep 1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886350 extract 1 total RNA P-GSE8839-5 GSM886350 LE 1 Cy3 P-GSE8839-6 GSM886350 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886350_sample_table.txt norm GSM886350_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886350 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75634.gif Lowaerationand0.01mMDNO MTB strain 1254 Ctrl vs low aeration + 0.01 mM DETA/NO rep 1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886350 extract 2 total RNA P-GSE8839-5 GSM886350 LE 2 Cy5 P-GSE8839-6 GSM886350 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886350_sample_table.txt norm GSM886350_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.01 mM of diethylenetriamine/nitric oxide GSM886349 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75632.gif 1254 No treatment MTB strain 1254 Ctrl vs low aeration + 0.001 mM DETA/NO rep 2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886349 extract 1 total RNA P-GSE8839-5 GSM886349 LE 1 Cy3 P-GSE8839-6 GSM886349 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886349_sample_table.txt norm GSM886349_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886349 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75632.gif Lowaerationand0.001mMDNO MTB strain 1254 Ctrl vs low aeration + 0.001 mM DETA/NO rep 2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886349 extract 2 total RNA P-GSE8839-5 GSM886349 LE 2 Cy5 P-GSE8839-6 GSM886349 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886349_sample_table.txt norm GSM886349_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.001 mM of diethylenetriamine/nitric oxide GSM886348 1 Simple annotation: Strain Comparison, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75055.gif MTB1254 Day 0 MTB1254 Day 0 vs low Oxygen Day 4 rep 2 Mycobacterium tuberculosis H37Rv (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886348 extract 1 total RNA P-GSE8839-5 GSM886348 LE 1 Cy3 P-GSE8839-6 GSM886348 A-GEOD-9901 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886348_sample_table.txt norm GSM886348_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv (wild_type) control EFO EFO_0001461 GSM886348 2 Simple annotation: Strain Comparison, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75055.gif MTB1254 Day 4 MTB1254 Day 0 vs low Oxygen Day 4 rep 2 Mycobacterium tuberculosis H37Rv (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886348 extract 2 total RNA P-GSE8839-5 GSM886348 LE 2 Cy5 P-GSE8839-6 GSM886348 A-GEOD-9901 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886348_sample_table.txt norm GSM886348_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv (wild_type) NRP (Wayne Growth)/4 days GSM886347 2 Simple annotation: Stress, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2001-07/18443.gif Strain: MTB strain 1254 Treatment: 0.05 mM DETA/NO for 40min MTB strain 1254 Ctrl vs 0.05 mM DETA/NO 40min rep 6 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886347 extract 2 total RNA P-GSE8839-5 GSM886347 LE 2 Cy5 P-GSE8839-6 GSM886347 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886347_sample_table.txt norm GSM886347_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.05mM of diethylenetriamine/nitric oxide for 40 minutes GSM886347 1 Simple annotation: Stress, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2001-07/18443.gif Strain: MTB strain 1254 Treatment: Control MTB strain 1254 Ctrl vs 0.05 mM DETA/NO 40min rep 6 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886347 extract 1 total RNA P-GSE8839-5 GSM886347 LE 1 Cy3 P-GSE8839-6 GSM886347 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886347_sample_table.txt norm GSM886347_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886346 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75619.gif 1254 No treatment MTB strain 1254 Ctrl vs 0.5 mM KCN + 2hr hypoxia rep 3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886346 extract 1 total RNA P-GSE8839-5 GSM886346 LE 1 Cy3 P-GSE8839-6 GSM886346 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886346_sample_table.txt norm GSM886346_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886346 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75619.gif KCN 0.5mM GasPak 2h MTB strain 1254 Ctrl vs 0.5 mM KCN + 2hr hypoxia rep 3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886346 extract 2 total RNA P-GSE8839-5 GSM886346 LE 2 Cy5 P-GSE8839-6 GSM886346 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886346_sample_table.txt norm GSM886346_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.5mM Potassium cyanide plus 2 hours-hipoxia GSM886345 1 Simple annotation: Stress, Miscellaneous Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19187.gif Control MTB strain 1254 Ctrl vs high aeration + 0.01 mM DETA/NO rep 1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886345 extract 1 total RNA P-GSE8839-5 GSM886345 LE 1 Cy3 P-GSE8839-6 GSM886345 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886345_sample_table.txt norm GSM886345_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886345 2 Simple annotation: Stress, Miscellaneous Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19187.gif High aeration + 0.01mM DNO MTB strain 1254 Ctrl vs high aeration + 0.01 mM DETA/NO rep 1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886345 extract 2 total RNA P-GSE8839-5 GSM886345 LE 2 Cy5 P-GSE8839-6 GSM886345 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886345_sample_table.txt norm GSM886345_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.01 mM of diethylenetriamine/nitric oxide GSM886344 1 Simple annotation: Stress, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19038.gif Strain: MTB strain 1254 Treatment: Control MTB strain 1254 Ctrl vs 1.0 mM DETA/NO 40min rep 3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886344 extract 1 total RNA P-GSE8839-5 GSM886344 LE 1 Cy3 P-GSE8839-6 GSM886344 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886344_sample_table.txt norm GSM886344_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886344 2 Simple annotation: Stress, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19038.gif Strain: MTB strain 1254 Treatment: 1.0 mM DETA/NO for 40min MTB strain 1254 Ctrl vs 1.0 mM DETA/NO 40min rep 3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886344 extract 2 total RNA P-GSE8839-5 GSM886344 LE 2 Cy5 P-GSE8839-6 GSM886344 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886344_sample_table.txt norm GSM886344_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 1.0mM of diethylenetriamine/nitric oxide for 40 minutes GSM886343 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75629.gif No treatment MTB strain 1254 Ctrl vs high aeration rep1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886343 extract 2 total RNA P-GSE8839-5 GSM886343 LE 2 Cy5 P-GSE8839-6 GSM886343 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886343_sample_table.txt norm GSM886343_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886343 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75629.gif 1254 No treatment MTB strain 1254 Ctrl vs high aeration rep1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886343 extract 1 total RNA P-GSE8839-5 GSM886343 LE 1 Cy3 P-GSE8839-6 GSM886343 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886343_sample_table.txt norm GSM886343_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886342 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75660.gif KO NRP Day 4 H37Rv 0 day ctrl vs Rv3132-34 KO hypoxia 4 day rep 3 Mycobacterium tuberculosis H37Rv-Delta-dosR::kan P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886342 extract 2 total RNA P-GSE8839-5 GSM886342 LE 2 Cy5 P-GSE8839-6 GSM886342 A-GEOD-9901 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886342_sample_table.txt norm GSM886342_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv-Delta-dosR::kan NRP (Wayne Growth)/4 days GSM886342 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75660.gif Rv3132 4KO No treatment H37Rv 0 day ctrl vs Rv3132-34 KO hypoxia 4 day rep 3 Mycobacterium tuberculosis H37Rv-Delta-dosR::kan P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886342 extract 1 total RNA P-GSE8839-5 GSM886342 LE 1 Cy3 P-GSE8839-6 GSM886342 A-GEOD-9901 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886342_sample_table.txt norm GSM886342_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv-Delta-dosR::kan control EFO EFO_0001461 GSM886341 1 Simple annotation: Stress, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19034.gif Strain: MTB strain 1254 Treatment: Control MTB strain 1254 Ctrl vs 0.005 mM DETA/NO 40min rep 3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886341 extract 1 total RNA P-GSE8839-5 GSM886341 LE 1 Cy3 P-GSE8839-6 GSM886341 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886341_sample_table.txt norm GSM886341_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886341 2 Simple annotation: Stress, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19034.gif Strain: MTB strain 1254 Treatment: 0.005 mM DETA/NO for 40min MTB strain 1254 Ctrl vs 0.005 mM DETA/NO 40min rep 3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886341 extract 2 total RNA P-GSE8839-5 GSM886341 LE 2 Cy5 P-GSE8839-6 GSM886341 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886341_sample_table.txt norm GSM886341_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.005mM of diethylenetriamine/nitric oxide for 40 minutes GSM886340 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75609.gif 0.5mMDNO24h+0.05mMDNO40min MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 24hrs + 0.5 mM DNO 40min rep 3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886340 extract 2 total RNA P-GSE8839-5 GSM886340 LE 2 Cy5 P-GSE8839-6 GSM886340 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886340_sample_table.txt norm GSM886340_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.5mM of diethylenetriamine/nitric oxide for 24 hours + 0.05mM DNO 40 min GSM886340 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75609.gif 1254 No treatment MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 24hrs + 0.5 mM DNO 40min rep 3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886340 extract 1 total RNA P-GSE8839-5 GSM886340 LE 1 Cy3 P-GSE8839-6 GSM886340 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886340_sample_table.txt norm GSM886340_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886339 2 Simple annotation: Strain Comparison, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75059.gif MTB1254 Day 4 MTB1254 Day 0 vs low Oxygen Day 4 rep 6 Mycobacterium tuberculosis H37Rv (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886339 extract 2 total RNA P-GSE8839-5 GSM886339 LE 2 Cy5 P-GSE8839-6 GSM886339 A-GEOD-9901 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886339_sample_table.txt norm GSM886339_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv (wild_type) NRP (Wayne Growth)/4 days GSM886339 1 Simple annotation: Strain Comparison, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75059.gif MTB1254 Day 0 MTB1254 Day 0 vs low Oxygen Day 4 rep 6 Mycobacterium tuberculosis H37Rv (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886339 extract 1 total RNA P-GSE8839-5 GSM886339 LE 1 Cy3 P-GSE8839-6 GSM886339 A-GEOD-9901 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886339_sample_table.txt norm GSM886339_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv (wild_type) control EFO EFO_0001461 GSM886338 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75581.gif 1254 No treatment MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 1hr rep 4 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886338 extract 1 total RNA P-GSE8839-5 GSM886338 LE 1 Cy3 P-GSE8839-6 GSM886338 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886338_sample_table.txt norm GSM886338_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886338 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75581.gif 0.5mM DNO 1h MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 1hr rep 4 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886338 extract 2 total RNA P-GSE8839-5 GSM886338 LE 2 Cy5 P-GSE8839-6 GSM886338 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886338_sample_table.txt norm GSM886338_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.5mM of diethylenetriamine/nitric oxide for 1 hour GSM886337 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75593.gif 1254 No treatment MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 8hrs rep 3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886337 extract 1 total RNA P-GSE8839-5 GSM886337 LE 1 Cy3 P-GSE8839-6 GSM886337 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886337_sample_table.txt norm GSM886337_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886337 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75593.gif 0.5mM DNO 8h MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 8hrs rep 3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886337 extract 2 total RNA P-GSE8839-5 GSM886337 LE 2 Cy5 P-GSE8839-6 GSM886337 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886337_sample_table.txt norm GSM886337_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.5mM of diethylenetriamine/nitric oxide for 8 hours GSM886336 2 Simple annotation: Stress, Miscellaneous Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19151.gif Rv3133Comp 0.05mM DNO 40m H37Rv ctrl vs Rv3132-34 KO (complemented) 0.05 mM DETA/NO 40min rep 3 Mycobacterium tuberculosis H37Rv-Delta-dosR::kan plus DosR P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886336 extract 2 total RNA P-GSE8839-5 GSM886336 LE 2 Cy5 P-GSE8839-6 GSM886336 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886336_sample_table.txt norm GSM886336_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv-Delta-dosR::kan plus DosR 0.05mM of diethylenetriamine/nitric oxide for 40 minutes GSM886336 1 Simple annotation: Stress, Miscellaneous Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19151.gif Control H37Rv ctrl vs Rv3132-34 KO (complemented) 0.05 mM DETA/NO 40min rep 3 Mycobacterium tuberculosis H37Rv-Delta-dosR::kan plus DosR P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886336 extract 1 total RNA P-GSE8839-5 GSM886336 LE 1 Cy3 P-GSE8839-6 GSM886336 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886336_sample_table.txt norm GSM886336_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv-Delta-dosR::kan plus DosR control EFO EFO_0001461 GSM886335 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75583.gif 1254 No treatment MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 2hrs rep 1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886335 extract 1 total RNA P-GSE8839-5 GSM886335 LE 1 Cy3 P-GSE8839-6 GSM886335 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886335_sample_table.txt norm GSM886335_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886335 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75583.gif 0.5mM DNO 2h MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 2hrs rep 1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886335 extract 2 total RNA P-GSE8839-5 GSM886335 LE 2 Cy5 P-GSE8839-6 GSM886335 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886335_sample_table.txt norm GSM886335_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.5mM of diethylenetriamine/nitric oxide for 2 hours GSM886334 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75631.gif 1254 No treatment MTB strain 1254 Ctrl vs high aeration rep3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886334 extract 1 total RNA P-GSE8839-5 GSM886334 LE 1 Cy3 P-GSE8839-6 GSM886334 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886334_sample_table.txt norm GSM886334_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886334 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75631.gif No treatment MTB strain 1254 Ctrl vs high aeration rep3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886334 extract 2 total RNA P-GSE8839-5 GSM886334 LE 2 Cy5 P-GSE8839-6 GSM886334 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886334_sample_table.txt norm GSM886334_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886333 1 Simple annotation: Stress, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19041.gif Strain: MTB strain 1254 Treatment: Control MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 40min rep 1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886333 extract 1 total RNA P-GSE8839-5 GSM886333 LE 1 Cy3 P-GSE8839-6 GSM886333 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886333_sample_table.txt norm GSM886333_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886333 2 Simple annotation: Stress, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19041.gif Strain: MTB strain 1254 Treatment: 0.5 mM DETA/NO for 40min MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 40min rep 1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886333 extract 2 total RNA P-GSE8839-5 GSM886333 LE 2 Cy5 P-GSE8839-6 GSM886333 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886333_sample_table.txt norm GSM886333_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.5mM of diethylenetriamine/nitric oxide for 40 minutes GSM886332 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19132.gif Control MTB strain 1254 Ctrl vs 2hr Hypoxia rep 1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886332 extract 1 total RNA P-GSE8839-5 GSM886332 LE 1 Cy3 P-GSE8839-6 GSM886332 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886332_sample_table.txt norm GSM886332_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886332 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19132.gif 1254 HypoxiaGP 2h MTB strain 1254 Ctrl vs 2hr Hypoxia rep 1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886332 extract 2 total RNA P-GSE8839-5 GSM886332 LE 2 Cy5 P-GSE8839-6 GSM886332 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886332_sample_table.txt norm GSM886332_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) Exposing for 2 hour to 0.2% O2 (hypoxia) GSM886331 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75650.gif CDC1551 0.05DNO 40min CDC1551 Ctrl vs 0.05 mM DETA/NO 40 min rep 5 Mycobacterium tuberculosis CDC1551 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886331 extract 2 total RNA P-GSE8839-5 GSM886331 LE 2 Cy5 P-GSE8839-6 GSM886331 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886331_sample_table.txt norm GSM886331_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip CDC1551 (wild_type) 0.05mM of diethylenetriamine/nitric oxide for 40 minutes GSM886331 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75650.gif CDC1551 No treatment CDC1551 Ctrl vs 0.05 mM DETA/NO 40 min rep 5 Mycobacterium tuberculosis CDC1551 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886331 extract 1 total RNA P-GSE8839-5 GSM886331 LE 1 Cy3 P-GSE8839-6 GSM886331 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886331_sample_table.txt norm GSM886331_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip CDC1551 (wild_type) control EFO EFO_0001461 GSM886330 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75604.gif 0.5mM DNO 24h MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 24hrs rep 2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886330 extract 2 total RNA P-GSE8839-5 GSM886330 LE 2 Cy5 P-GSE8839-6 GSM886330 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886330_sample_table.txt norm GSM886330_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.5mM of diethylenetriamine/nitric oxide for 24 hours GSM886330 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75604.gif 1254 No treatment MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 24hrs rep 2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886330 extract 1 total RNA P-GSE8839-5 GSM886330 LE 1 Cy3 P-GSE8839-6 GSM886330 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886330_sample_table.txt norm GSM886330_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886329 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75655.gif H37Rv No treatment H37 Rv3132-34 KO 0 days vs Rv3132-34 KO (complemented) hypoxia 4 day rep 2 Mycobacterium tuberculosis H37Rv-Delta-dosR::kan plus DosR P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886329 extract 1 total RNA P-GSE8839-5 GSM886329 LE 1 Cy3 P-GSE8839-6 GSM886329 A-GEOD-9901 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886329_sample_table.txt norm GSM886329_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv-Delta-dosR::kan plus DosR control EFO EFO_0001461 GSM886329 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75655.gif CO NRP Day 4 H37 Rv3132-34 KO 0 days vs Rv3132-34 KO (complemented) hypoxia 4 day rep 2 Mycobacterium tuberculosis H37Rv-Delta-dosR::kan plus DosR P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886329 extract 2 total RNA P-GSE8839-5 GSM886329 LE 2 Cy5 P-GSE8839-6 GSM886329 A-GEOD-9901 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886329_sample_table.txt norm GSM886329_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv-Delta-dosR::kan plus DosR NRP (Wayne Growth)/4 days GSM886328 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75621.gif 1254 No treatment MTB strain 1254 Ctrl vs high aeration + 0.001 mM DETA/NO rep 2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886328 extract 1 total RNA P-GSE8839-5 GSM886328 LE 1 Cy3 P-GSE8839-6 GSM886328 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886328_sample_table.txt norm GSM886328_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886328 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75621.gif Highaerationand0.001mMDNO MTB strain 1254 Ctrl vs high aeration + 0.001 mM DETA/NO rep 2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886328 extract 2 total RNA P-GSE8839-5 GSM886328 LE 2 Cy5 P-GSE8839-6 GSM886328 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886328_sample_table.txt norm GSM886328_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.001 mM of diethylenetriamine/nitric oxide GSM886327 2 Simple annotation: Stress, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2001-07/18441.gif Strain: MTB strain 1254 Treatment: 0.05 mM DETA/NO for 40min MTB strain 1254 Ctrl vs 0.05 mM DETA/NO 40min rep 4 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886327 extract 2 total RNA P-GSE8839-5 GSM886327 LE 2 Cy5 P-GSE8839-6 GSM886327 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886327_sample_table.txt norm GSM886327_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.05mM of diethylenetriamine/nitric oxide for 40 minutes GSM886327 1 Simple annotation: Stress, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2001-07/18441.gif Strain: MTB strain 1254 Treatment: Control MTB strain 1254 Ctrl vs 0.05 mM DETA/NO 40min rep 4 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886327 extract 1 total RNA P-GSE8839-5 GSM886327 LE 1 Cy3 P-GSE8839-6 GSM886327 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886327_sample_table.txt norm GSM886327_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886326 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75596.gif 1254 No treatment MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 16hrs rep 2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886326 extract 1 total RNA P-GSE8839-5 GSM886326 LE 1 Cy3 P-GSE8839-6 GSM886326 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886326_sample_table.txt norm GSM886326_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886326 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75596.gif 0.5mM DNO 16h MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 16hrs rep 2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886326 extract 2 total RNA P-GSE8839-5 GSM886326 LE 2 Cy5 P-GSE8839-6 GSM886326 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886326_sample_table.txt norm GSM886326_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.5mM of diethylenetriamine/nitric oxide for 16 hours GSM886325 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75595.gif 1254 No treatment MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 16hrs rep 1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886325 extract 1 total RNA P-GSE8839-5 GSM886325 LE 1 Cy3 P-GSE8839-6 GSM886325 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886325_sample_table.txt norm GSM886325_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886325 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75595.gif 0.5mM DNO 16h MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 16hrs rep 1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886325 extract 2 total RNA P-GSE8839-5 GSM886325 LE 2 Cy5 P-GSE8839-6 GSM886325 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886325_sample_table.txt norm GSM886325_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.5mM of diethylenetriamine/nitric oxide for 16 hours GSM886324 1 Simple annotation: Stress, Miscellaneous Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19149.gif Control H37Rv ctrl vs Rv3132-34 KO (complemented) 0.05 mM DETA/NO 40min rep 1 Mycobacterium tuberculosis H37Rv-Delta-dosR::kan plus DosR P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886324 extract 1 total RNA P-GSE8839-5 GSM886324 LE 1 Cy3 P-GSE8839-6 GSM886324 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886324_sample_table.txt norm GSM886324_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv-Delta-dosR::kan plus DosR control EFO EFO_0001461 GSM886324 2 Simple annotation: Stress, Miscellaneous Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19149.gif Rv3133Comp 0.05mM DNO 40m H37Rv ctrl vs Rv3132-34 KO (complemented) 0.05 mM DETA/NO 40min rep 1 Mycobacterium tuberculosis H37Rv-Delta-dosR::kan plus DosR P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886324 extract 2 total RNA P-GSE8839-5 GSM886324 LE 2 Cy5 P-GSE8839-6 GSM886324 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886324_sample_table.txt norm GSM886324_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv-Delta-dosR::kan plus DosR 0.05mM of diethylenetriamine/nitric oxide for 40 minutes GSM886323 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75639.gif 1254 No treatment MTB strain 1254 Ctrl vs low aeration + 0.005 mM DETA/NO rep 3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886323 extract 1 total RNA P-GSE8839-5 GSM886323 LE 1 Cy3 P-GSE8839-6 GSM886323 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886323_sample_table.txt norm GSM886323_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886323 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75639.gif Lowaerationand0.005mMDNO MTB strain 1254 Ctrl vs low aeration + 0.005 mM DETA/NO rep 3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886323 extract 2 total RNA P-GSE8839-5 GSM886323 LE 2 Cy5 P-GSE8839-6 GSM886323 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886323_sample_table.txt norm GSM886323_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.005 mM of diethylenetriamine/nitric oxide GSM886322 2 Simple annotation: Stress, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/74761.gif Strain: MTB strain 1254 Treatment: 1.0 mM DETA/NO for 40min MTB strain 1254 Ctrl vs 1.0 mM DETA/NO 40min rep 4 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886322 extract 2 total RNA P-GSE8839-5 GSM886322 LE 2 Cy5 P-GSE8839-6 GSM886322 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886322_sample_table.txt norm GSM886322_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 1.0mM of diethylenetriamine/nitric oxide for 40 minutes GSM886322 1 Simple annotation: Stress, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/74761.gif Strain: MTB strain 1254 Treatment: Control MTB strain 1254 Ctrl vs 1.0 mM DETA/NO 40min rep 4 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886322 extract 1 total RNA P-GSE8839-5 GSM886322 LE 1 Cy3 P-GSE8839-6 GSM886322 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886322_sample_table.txt norm GSM886322_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886321 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75617.gif 1254 No treatment MTB strain 1254 Ctrl vs 0.5 mM KCN + 2hr hypoxia rep 1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886321 extract 1 total RNA P-GSE8839-5 GSM886321 LE 1 Cy3 P-GSE8839-6 GSM886321 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886321_sample_table.txt norm GSM886321_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886321 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75617.gif KCN 0.5mM GasPak 2h MTB strain 1254 Ctrl vs 0.5 mM KCN + 2hr hypoxia rep 1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886321 extract 2 total RNA P-GSE8839-5 GSM886321 LE 2 Cy5 P-GSE8839-6 GSM886321 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886321_sample_table.txt norm GSM886321_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.5mM Potassium cyanide plus 2 hours-hipoxia GSM886320 2 Simple annotation: Stress, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2001-07/18439.gif Strain: MTB strain 1254 Treatment: 0.05 mM DETA/NO for 40min MTB strain 1254 Ctrl vs 0.05 mM DETA/NO 40min rep 2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886320 extract 2 total RNA P-GSE8839-5 GSM886320 LE 2 Cy5 P-GSE8839-6 GSM886320 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886320_sample_table.txt norm GSM886320_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.05mM of diethylenetriamine/nitric oxide for 40 minutes GSM886320 1 Simple annotation: Stress, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2001-07/18439.gif Strain: MTB strain 1254 Treatment: Control MTB strain 1254 Ctrl vs 0.05 mM DETA/NO 40min rep 2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886320 extract 1 total RNA P-GSE8839-5 GSM886320 LE 1 Cy3 P-GSE8839-6 GSM886320 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886320_sample_table.txt norm GSM886320_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886319 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75608.gif 0.5mMDNO24h+0.05mMDNO40min MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 24hrs + 0.5 mM DNO 40min rep 2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886319 extract 2 total RNA P-GSE8839-5 GSM886319 LE 2 Cy5 P-GSE8839-6 GSM886319 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886319_sample_table.txt norm GSM886319_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.5mM of diethylenetriamine/nitric oxide for 24 hours + 0.05mM DNO 40 min GSM886319 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75608.gif 1254 No treatment MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 24hrs + 0.5 mM DNO 40min rep 2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886319 extract 1 total RNA P-GSE8839-5 GSM886319 LE 1 Cy3 P-GSE8839-6 GSM886319 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886319_sample_table.txt norm GSM886319_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886318 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75652.gif Rv3132 4KO No treatment H37Rv ctrl vs Rv3132-3134 KO 0.05 mM DETA/NO 40min rep 4 Mycobacterium tuberculosis H37Rv-Delta-dosR::kan P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886318 extract 1 total RNA P-GSE8839-5 GSM886318 LE 1 Cy3 P-GSE8839-6 GSM886318 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886318_sample_table.txt norm GSM886318_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv-Delta-dosR::kan control EFO EFO_0001461 GSM886318 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75652.gif Rv3132 4KO0.05DNO40min H37Rv ctrl vs Rv3132-3134 KO 0.05 mM DETA/NO 40min rep 4 Mycobacterium tuberculosis H37Rv-Delta-dosR::kan P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886318 extract 2 total RNA P-GSE8839-5 GSM886318 LE 2 Cy5 P-GSE8839-6 GSM886318 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886318_sample_table.txt norm GSM886318_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv-Delta-dosR::kan 0.05mM of diethylenetriamine/nitric oxide for 40 minutes GSM886317 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75585.gif 0.5mM DNO 2h MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 2hrs rep 3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886317 extract 2 total RNA P-GSE8839-5 GSM886317 LE 2 Cy5 P-GSE8839-6 GSM886317 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886317_sample_table.txt norm GSM886317_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.5mM of diethylenetriamine/nitric oxide for 2 hours GSM886317 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75585.gif 1254 No treatment MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 2hrs rep 3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886317 extract 1 total RNA P-GSE8839-5 GSM886317 LE 1 Cy3 P-GSE8839-6 GSM886317 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886317_sample_table.txt norm GSM886317_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886316 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75640.gif 1254 No treatment MTB strain 1254 Ctrl vs low aeration + 0.05 mM DETA/NO rep 1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886316 extract 1 total RNA P-GSE8839-5 GSM886316 LE 1 Cy3 P-GSE8839-6 GSM886316 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886316_sample_table.txt norm GSM886316_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886316 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75640.gif Lowaerationand0.05mMDNO MTB strain 1254 Ctrl vs low aeration + 0.05 mM DETA/NO rep 1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886316 extract 2 total RNA P-GSE8839-5 GSM886316 LE 2 Cy5 P-GSE8839-6 GSM886316 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886316_sample_table.txt norm GSM886316_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.05 mM of diethylenetriamine/nitric oxide GSM886315 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75642.gif 1254 No treatment MTB strain 1254 Ctrl vs low aeration + 0.05 mM DETA/NO rep 3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886315 extract 1 total RNA P-GSE8839-5 GSM886315 LE 1 Cy3 P-GSE8839-6 GSM886315 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886315_sample_table.txt norm GSM886315_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886315 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75642.gif Lowaerationand0.05mMDNO MTB strain 1254 Ctrl vs low aeration + 0.05 mM DETA/NO rep 3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886315 extract 2 total RNA P-GSE8839-5 GSM886315 LE 2 Cy5 P-GSE8839-6 GSM886315 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886315_sample_table.txt norm GSM886315_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.05 mM of diethylenetriamine/nitric oxide GSM886314 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75625.gif Highaerationand0.005mMDNO MTB strain 1254 Ctrl vs high aeration + 0.005 mM DETA/NO rep 2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886314 extract 2 total RNA P-GSE8839-5 GSM886314 LE 2 Cy5 P-GSE8839-6 GSM886314 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886314_sample_table.txt norm GSM886314_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.005 mM of diethylenetriamine/nitric oxide GSM886314 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75625.gif 1254 No treatment MTB strain 1254 Ctrl vs high aeration + 0.005 mM DETA/NO rep 2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886314 extract 1 total RNA P-GSE8839-5 GSM886314 LE 1 Cy3 P-GSE8839-6 GSM886314 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886314_sample_table.txt norm GSM886314_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886313 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75623.gif 1254 No treatment MTB strain 1254 Ctrl vs high aeration + 0.01 mM DETA/NO rep 2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886313 extract 1 total RNA P-GSE8839-5 GSM886313 LE 1 Cy3 P-GSE8839-6 GSM886313 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886313_sample_table.txt norm GSM886313_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886313 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75623.gif Highaerationand0.01mMDNO MTB strain 1254 Ctrl vs high aeration + 0.01 mM DETA/NO rep 2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886313 extract 2 total RNA P-GSE8839-5 GSM886313 LE 2 Cy5 P-GSE8839-6 GSM886313 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886313_sample_table.txt norm GSM886313_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.01 mM of diethylenetriamine/nitric oxide GSM886312 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75635.gif Lowaerationand0.01mMDNO MTB strain 1254 Ctrl vs low aeration + 0.01 mM DETA/NO rep 2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886312 extract 2 total RNA P-GSE8839-5 GSM886312 LE 2 Cy5 P-GSE8839-6 GSM886312 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886312_sample_table.txt norm GSM886312_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.01 mM of diethylenetriamine/nitric oxide GSM886312 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75635.gif 1254 No treatment MTB strain 1254 Ctrl vs low aeration + 0.01 mM DETA/NO rep 2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886312 extract 1 total RNA P-GSE8839-5 GSM886312 LE 1 Cy3 P-GSE8839-6 GSM886312 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886312_sample_table.txt norm GSM886312_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886311 2 Simple annotation: Strain Comparison, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75091.gif MTB1254 Day 0 MTB1254 Day 0 rep 2 Mycobacterium tuberculosis H37Rv (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886311 extract 2 total RNA P-GSE8839-5 GSM886311 LE 2 Cy5 P-GSE8839-6 GSM886311 A-GEOD-9901 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886311_sample_table.txt norm GSM886311_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv (wild_type) Control (Growth curve) 0 days GSM886311 1 Simple annotation: Strain Comparison, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75091.gif MTB1254 Day 0 MTB1254 Day 0 rep 2 Mycobacterium tuberculosis H37Rv (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886311 extract 1 total RNA P-GSE8839-5 GSM886311 LE 1 Cy3 P-GSE8839-6 GSM886311 A-GEOD-9901 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886311_sample_table.txt norm GSM886311_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv (wild_type) control EFO EFO_0001461 GSM886310 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75589.gif 1254 No treatment MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 5min rep 3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886310 extract 1 total RNA P-GSE8839-5 GSM886310 LE 1 Cy3 P-GSE8839-6 GSM886310 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886310_sample_table.txt norm GSM886310_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886310 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75589.gif 0.5mM DNO 5min MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 5min rep 3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886310 extract 2 total RNA P-GSE8839-5 GSM886310 LE 2 Cy5 P-GSE8839-6 GSM886310 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886310_sample_table.txt norm GSM886310_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.5mM of diethylenetriamine/nitric oxide for 5 minutes GSM886309 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19137.gif Rv 0.05mM DNO 40m H37Rv Ctrl vs 0.05 mM DETA/NO 40min rep 3 Mycobacterium tuberculosis H37Rv (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886309 extract 2 total RNA P-GSE8839-5 GSM886309 LE 2 Cy5 P-GSE8839-6 GSM886309 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886309_sample_table.txt norm GSM886309_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv (wild_type) 0.05mM of diethylenetriamine/nitric oxide for 40 minutes GSM886309 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19137.gif Control H37Rv Ctrl vs 0.05 mM DETA/NO 40min rep 3 Mycobacterium tuberculosis H37Rv (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886309 extract 1 total RNA P-GSE8839-5 GSM886309 LE 1 Cy3 P-GSE8839-6 GSM886309 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886309_sample_table.txt norm GSM886309_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv (wild_type) control EFO EFO_0001461 GSM886308 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75587.gif 0.5mM DNO 5min MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 5min rep 1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886308 extract 2 total RNA P-GSE8839-5 GSM886308 LE 2 Cy5 P-GSE8839-6 GSM886308 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886308_sample_table.txt norm GSM886308_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.5mM of diethylenetriamine/nitric oxide for 5 minutes GSM886308 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75587.gif 1254 No treatment MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 5min rep 1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886308 extract 1 total RNA P-GSE8839-5 GSM886308 LE 1 Cy3 P-GSE8839-6 GSM886308 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886308_sample_table.txt norm GSM886308_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886307 2 Simple annotation: Stress, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19037.gif Strain: MTB strain 1254 Treatment: 1.0 mM DETA/NO for 40min MTB strain 1254 Ctrl vs 1.0 mM DETA/NO 40min rep 2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886307 extract 2 total RNA P-GSE8839-5 GSM886307 LE 2 Cy5 P-GSE8839-6 GSM886307 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886307_sample_table.txt norm GSM886307_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 1.0mM of diethylenetriamine/nitric oxide for 40 minutes GSM886307 1 Simple annotation: Stress, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19037.gif Strain: MTB strain 1254 Treatment: Control MTB strain 1254 Ctrl vs 1.0 mM DETA/NO 40min rep 2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886307 extract 1 total RNA P-GSE8839-5 GSM886307 LE 1 Cy3 P-GSE8839-6 GSM886307 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886307_sample_table.txt norm GSM886307_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886306 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75601.gif 1254 No treatment MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 20min rep 3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886306 extract 1 total RNA P-GSE8839-5 GSM886306 LE 1 Cy3 P-GSE8839-6 GSM886306 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886306_sample_table.txt norm GSM886306_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886306 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75601.gif 0.5mM DNO 20 min MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 20min rep 3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886306 extract 2 total RNA P-GSE8839-5 GSM886306 LE 2 Cy5 P-GSE8839-6 GSM886306 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886306_sample_table.txt norm GSM886306_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.5mM of diethylenetriamine/nitric oxide for 20 minutes GSM886305 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75645.gif No treatment MTB strain 1254 Ctrl vs low aeration (0.2% oxygen) 2hr rep 3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886305 extract 2 total RNA P-GSE8839-5 GSM886305 LE 2 Cy5 P-GSE8839-6 GSM886305 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886305_sample_table.txt norm GSM886305_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886305 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75645.gif 1254 No treatment MTB strain 1254 Ctrl vs low aeration (0.2% oxygen) 2hr rep 3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886305 extract 1 total RNA P-GSE8839-5 GSM886305 LE 1 Cy3 P-GSE8839-6 GSM886305 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886305_sample_table.txt norm GSM886305_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886304 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75613.gif KCN 0.5mM 1h MTB strain 1254 Ctrl vs 0.5 mM KCN 1hr rep 3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886304 extract 2 total RNA P-GSE8839-5 GSM886304 LE 2 Cy5 P-GSE8839-6 GSM886304 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886304_sample_table.txt norm GSM886304_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.5mM Potassium cyanide 1 hour GSM886304 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75613.gif 1254 No treatment MTB strain 1254 Ctrl vs 0.5 mM KCN 1hr rep 3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886304 extract 1 total RNA P-GSE8839-5 GSM886304 LE 1 Cy3 P-GSE8839-6 GSM886304 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886304_sample_table.txt norm GSM886304_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886303 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75648.gif CDC1551 0.05DNO 40min CDC1551 Ctrl vs 0.05 mM DETA/NO 40 min rep 3 Mycobacterium tuberculosis CDC1551 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886303 extract 2 total RNA P-GSE8839-5 GSM886303 LE 2 Cy5 P-GSE8839-6 GSM886303 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886303_sample_table.txt norm GSM886303_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip CDC1551 (wild_type) 0.05mM of diethylenetriamine/nitric oxide for 40 minutes GSM886303 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75648.gif CDC1551 No treatment CDC1551 Ctrl vs 0.05 mM DETA/NO 40 min rep 3 Mycobacterium tuberculosis CDC1551 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886303 extract 1 total RNA P-GSE8839-5 GSM886303 LE 1 Cy3 P-GSE8839-6 GSM886303 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886303_sample_table.txt norm GSM886303_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip CDC1551 (wild_type) control EFO EFO_0001461 GSM886302 2 Simple annotation: Stress, Miscellaneous Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19147.gif Rv3132-4KO 0.05mM DNO 40m H37Rv ctrl vs Rv3132-3134 KO 0.05 mM DETA/NO 40min rep 3 Mycobacterium tuberculosis H37Rv-Delta-dosR::kan P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886302 extract 2 total RNA P-GSE8839-5 GSM886302 LE 2 Cy5 P-GSE8839-6 GSM886302 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886302_sample_table.txt norm GSM886302_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv-Delta-dosR::kan 0.05mM of diethylenetriamine/nitric oxide for 40 minutes GSM886302 1 Simple annotation: Stress, Miscellaneous Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19147.gif Control H37Rv ctrl vs Rv3132-3134 KO 0.05 mM DETA/NO 40min rep 3 Mycobacterium tuberculosis H37Rv-Delta-dosR::kan P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886302 extract 1 total RNA P-GSE8839-5 GSM886302 LE 1 Cy3 P-GSE8839-6 GSM886302 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886302_sample_table.txt norm GSM886302_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv-Delta-dosR::kan control EFO EFO_0001461 GSM886301 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75600.gif 0.5mM DNO 20 min MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 20min rep 2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886301 extract 2 total RNA P-GSE8839-5 GSM886301 LE 2 Cy5 P-GSE8839-6 GSM886301 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886301_sample_table.txt norm GSM886301_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.5mM of diethylenetriamine/nitric oxide for 20 minutes GSM886301 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75600.gif 1254 No treatment MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 20min rep 2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886301 extract 1 total RNA P-GSE8839-5 GSM886301 LE 1 Cy3 P-GSE8839-6 GSM886301 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886301_sample_table.txt norm GSM886301_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886300 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75633.gif 1254 No treatment MTB strain 1254 Ctrl vs low aeration + 0.001 mM DETA/NO rep 3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886300 extract 1 total RNA P-GSE8839-5 GSM886300 LE 1 Cy3 P-GSE8839-6 GSM886300 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886300_sample_table.txt norm GSM886300_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886300 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75633.gif Lowaerationand0.001mMDNO MTB strain 1254 Ctrl vs low aeration + 0.001 mM DETA/NO rep 3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886300 extract 2 total RNA P-GSE8839-5 GSM886300 LE 2 Cy5 P-GSE8839-6 GSM886300 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886300_sample_table.txt norm GSM886300_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.001 mM of diethylenetriamine/nitric oxide GSM886299 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75643.gif No treatment MTB strain 1254 Ctrl vs low aeration (0.2% oxygen) 2hr rep 1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886299 extract 2 total RNA P-GSE8839-5 GSM886299 LE 2 Cy5 P-GSE8839-6 GSM886299 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886299_sample_table.txt norm GSM886299_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886299 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75643.gif 1254 No treatment MTB strain 1254 Ctrl vs low aeration (0.2% oxygen) 2hr rep 1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886299 extract 1 total RNA P-GSE8839-5 GSM886299 LE 1 Cy3 P-GSE8839-6 GSM886299 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886299_sample_table.txt norm GSM886299_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886298 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75605.gif 1254 No treatment MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 24hrs rep 3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886298 extract 1 total RNA P-GSE8839-5 GSM886298 LE 1 Cy3 P-GSE8839-6 GSM886298 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886298_sample_table.txt norm GSM886298_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886298 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75605.gif 0.5mM DNO 24h MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 24hrs rep 3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886298 extract 2 total RNA P-GSE8839-5 GSM886298 LE 2 Cy5 P-GSE8839-6 GSM886298 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886298_sample_table.txt norm GSM886298_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.5mM of diethylenetriamine/nitric oxide for 24 hours GSM886297 1 Simple annotation: Stress, Miscellaneous Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19184.gif Control MTB strain 1254 Ctrl vs high aeration + 0.005 mM DETA/NO rep 1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886297 extract 1 total RNA P-GSE8839-5 GSM886297 LE 1 Cy3 P-GSE8839-6 GSM886297 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886297_sample_table.txt norm GSM886297_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886297 2 Simple annotation: Stress, Miscellaneous Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19184.gif High aeration + 0.005mM DNO MTB strain 1254 Ctrl vs high aeration + 0.005 mM DETA/NO rep 1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886297 extract 2 total RNA P-GSE8839-5 GSM886297 LE 2 Cy5 P-GSE8839-6 GSM886297 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886297_sample_table.txt norm GSM886297_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.005 mM of diethylenetriamine/nitric oxide GSM886296 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75591.gif 0.5mM DNO 8h MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 8hrs rep 1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886296 extract 2 total RNA P-GSE8839-5 GSM886296 LE 2 Cy5 P-GSE8839-6 GSM886296 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886296_sample_table.txt norm GSM886296_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.5mM of diethylenetriamine/nitric oxide for 8 hours GSM886296 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75591.gif 1254 No treatment MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 8hrs rep 1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886296 extract 1 total RNA P-GSE8839-5 GSM886296 LE 1 Cy3 P-GSE8839-6 GSM886296 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886296_sample_table.txt norm GSM886296_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886295 1 Simple annotation: Stress, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2001-07/18442.gif Strain: MTB strain 1254 Treatment: Control MTB strain 1254 Ctrl vs 0.05 mM DETA/NO 40min rep 5 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886295 extract 1 total RNA P-GSE8839-5 GSM886295 LE 1 Cy3 P-GSE8839-6 GSM886295 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886295_sample_table.txt norm GSM886295_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886295 2 Simple annotation: Stress, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2001-07/18442.gif Strain: MTB strain 1254 Treatment: 0.05 mM DETA/NO for 40min MTB strain 1254 Ctrl vs 0.05 mM DETA/NO 40min rep 5 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886295 extract 2 total RNA P-GSE8839-5 GSM886295 LE 2 Cy5 P-GSE8839-6 GSM886295 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886295_sample_table.txt norm GSM886295_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.05mM of diethylenetriamine/nitric oxide for 40 minutes GSM886294 1 Simple annotation: Strain Comparison, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75058.gif MTB1254 Day 0 MTB1254 Day 0 vs low Oxygen Day 4 rep 5 Mycobacterium tuberculosis H37Rv (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886294 extract 1 total RNA P-GSE8839-5 GSM886294 LE 1 Cy3 P-GSE8839-6 GSM886294 A-GEOD-9901 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886294_sample_table.txt norm GSM886294_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv (wild_type) control EFO EFO_0001461 GSM886294 2 Simple annotation: Strain Comparison, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75058.gif MTB1254 Day 4 MTB1254 Day 0 vs low Oxygen Day 4 rep 5 Mycobacterium tuberculosis H37Rv (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886294 extract 2 total RNA P-GSE8839-5 GSM886294 LE 2 Cy5 P-GSE8839-6 GSM886294 A-GEOD-9901 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886294_sample_table.txt norm GSM886294_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv (wild_type) NRP (Wayne Growth)/4 days GSM886293 2 Simple annotation: Stress, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19045.gif Strain: MTB strain 1254 Treatment: 5.0 mM DETA/NO for 40min MTB strain 1254 Ctrl vs 5.0 mM DETA/NO 40min rep 3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886293 extract 2 total RNA P-GSE8839-5 GSM886293 LE 2 Cy5 P-GSE8839-6 GSM886293 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886293_sample_table.txt norm GSM886293_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 5.0mM of diethylenetriamine/nitric oxide for 40 minutes GSM886293 1 Simple annotation: Stress, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19045.gif Strain: MTB strain 1254 Treatment: Control MTB strain 1254 Ctrl vs 5.0 mM DETA/NO 40min rep 3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886293 extract 1 total RNA P-GSE8839-5 GSM886293 LE 1 Cy3 P-GSE8839-6 GSM886293 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886293_sample_table.txt norm GSM886293_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886292 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19145.gif Rv3132-4KO 0.05mM DNO 40m H37Rv ctrl vs Rv3132-3134 KO 0.05 mM DETA/NO 40min rep 1 Mycobacterium tuberculosis H37Rv-Delta-dosR::kan P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886292 extract 2 total RNA P-GSE8839-5 GSM886292 LE 2 Cy5 P-GSE8839-6 GSM886292 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886292_sample_table.txt norm GSM886292_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv-Delta-dosR::kan 0.05mM of diethylenetriamine/nitric oxide for 40 minutes GSM886292 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19145.gif Control H37Rv ctrl vs Rv3132-3134 KO 0.05 mM DETA/NO 40min rep 1 Mycobacterium tuberculosis H37Rv-Delta-dosR::kan P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886292 extract 1 total RNA P-GSE8839-5 GSM886292 LE 1 Cy3 P-GSE8839-6 GSM886292 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886292_sample_table.txt norm GSM886292_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv-Delta-dosR::kan control EFO EFO_0001461 GSM886291 2 Simple annotation: Stress, Miscellaneous Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19181.gif High aeration + 0.001mM DNO MTB strain 1254 Ctrl vs high aeration + 0.001 mM DETA/NO rep 1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886291 extract 2 total RNA P-GSE8839-5 GSM886291 LE 2 Cy5 P-GSE8839-6 GSM886291 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886291_sample_table.txt norm GSM886291_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.001 mM of diethylenetriamine/nitric oxide GSM886291 1 Simple annotation: Stress, Miscellaneous Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19181.gif Control MTB strain 1254 Ctrl vs high aeration + 0.001 mM DETA/NO rep 1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886291 extract 1 total RNA P-GSE8839-5 GSM886291 LE 1 Cy3 P-GSE8839-6 GSM886291 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886291_sample_table.txt norm GSM886291_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886290 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75658.gif KO NRP Day 4 H37Rv 0 day ctrl vs Rv3132-34 KO hypoxia 4 day rep 1 Mycobacterium tuberculosis H37Rv-Delta-dosR::kan P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886290 extract 2 total RNA P-GSE8839-5 GSM886290 LE 2 Cy5 P-GSE8839-6 GSM886290 A-GEOD-9901 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886290_sample_table.txt norm GSM886290_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv-Delta-dosR::kan NRP (Wayne Growth)/4 days GSM886290 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75658.gif Rv3132 4KO No treatment H37Rv 0 day ctrl vs Rv3132-34 KO hypoxia 4 day rep 1 Mycobacterium tuberculosis H37Rv-Delta-dosR::kan P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886290 extract 1 total RNA P-GSE8839-5 GSM886290 LE 1 Cy3 P-GSE8839-6 GSM886290 A-GEOD-9901 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886290_sample_table.txt norm GSM886290_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv-Delta-dosR::kan control EFO EFO_0001461 GSM886289 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19135.gif Control H37Rv Ctrl vs 0.05 mM DETA/NO 40min rep 1 Mycobacterium tuberculosis H37Rv (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886289 extract 1 total RNA P-GSE8839-5 GSM886289 LE 1 Cy3 P-GSE8839-6 GSM886289 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886289_sample_table.txt norm GSM886289_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv (wild_type) control EFO EFO_0001461 GSM886289 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19135.gif Rv 0.05mM DNO 40m H37Rv Ctrl vs 0.05 mM DETA/NO 40min rep 1 Mycobacterium tuberculosis H37Rv (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886289 extract 2 total RNA P-GSE8839-5 GSM886289 LE 2 Cy5 P-GSE8839-6 GSM886289 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886289_sample_table.txt norm GSM886289_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv (wild_type) 0.05mM of diethylenetriamine/nitric oxide for 40 minutes GSM886288 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75598.gif 1254 No treatment MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 16hrs rep 4 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886288 extract 1 total RNA P-GSE8839-5 GSM886288 LE 1 Cy3 P-GSE8839-6 GSM886288 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886288_sample_table.txt norm GSM886288_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886288 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75598.gif 0.5mM DNO 16h MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 16hrs rep 4 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886288 extract 2 total RNA P-GSE8839-5 GSM886288 LE 2 Cy5 P-GSE8839-6 GSM886288 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886288_sample_table.txt norm GSM886288_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.5mM of diethylenetriamine/nitric oxide for 16 hours GSM886287 2 Simple annotation: Stress, Miscellaneous Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19150.gif Rv3133Comp 0.05mM DNO 40m H37Rv ctrl vs Rv3132-34 KO (complemented) 0.05 mM DETA/NO 40min rep 2 Mycobacterium tuberculosis H37Rv-Delta-dosR::kan plus DosR P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886287 extract 2 total RNA P-GSE8839-5 GSM886287 LE 2 Cy5 P-GSE8839-6 GSM886287 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886287_sample_table.txt norm GSM886287_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv-Delta-dosR::kan plus DosR 0.05mM of diethylenetriamine/nitric oxide for 40 minutes GSM886287 1 Simple annotation: Stress, Miscellaneous Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19150.gif Control H37Rv ctrl vs Rv3132-34 KO (complemented) 0.05 mM DETA/NO 40min rep 2 Mycobacterium tuberculosis H37Rv-Delta-dosR::kan plus DosR P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886287 extract 1 total RNA P-GSE8839-5 GSM886287 LE 1 Cy3 P-GSE8839-6 GSM886287 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886287_sample_table.txt norm GSM886287_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv-Delta-dosR::kan plus DosR control EFO EFO_0001461 GSM886286 2 Simple annotation: Stress, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19032.gif Strain: MTB strain 1254 Treatment: 0.005 mM DETA/NO for 40min MTB strain 1254 Ctrl vs 0.005 mM DETA/NO 40min rep 1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886286 extract 2 total RNA P-GSE8839-5 GSM886286 LE 2 Cy5 P-GSE8839-6 GSM886286 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886286_sample_table.txt norm GSM886286_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.005mM of diethylenetriamine/nitric oxide for 40 minutes GSM886286 1 Simple annotation: Stress, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19032.gif Strain: MTB strain 1254 Treatment: Control MTB strain 1254 Ctrl vs 0.005 mM DETA/NO 40min rep 1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886286 extract 1 total RNA P-GSE8839-5 GSM886286 LE 1 Cy3 P-GSE8839-6 GSM886286 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886286_sample_table.txt norm GSM886286_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886285 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75611.gif 1254 No treatment MTB strain 1254 Ctrl vs 0.5 mM KCN 1hr rep 1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886285 extract 1 total RNA P-GSE8839-5 GSM886285 LE 1 Cy3 P-GSE8839-6 GSM886285 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886285_sample_table.txt norm GSM886285_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886285 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75611.gif KCN 0.5mM 1h MTB strain 1254 Ctrl vs 0.5 mM KCN 1hr rep 1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886285 extract 2 total RNA P-GSE8839-5 GSM886285 LE 2 Cy5 P-GSE8839-6 GSM886285 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886285_sample_table.txt norm GSM886285_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.5mM Potassium cyanide 1 hour GSM886284 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75584.gif 1254 No treatment MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 2hrs rep 2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886284 extract 1 total RNA P-GSE8839-5 GSM886284 LE 1 Cy3 P-GSE8839-6 GSM886284 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886284_sample_table.txt norm GSM886284_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886284 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75584.gif 0.5mM DNO 2h MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 2hrs rep 2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886284 extract 2 total RNA P-GSE8839-5 GSM886284 LE 2 Cy5 P-GSE8839-6 GSM886284 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886284_sample_table.txt norm GSM886284_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.5mM of diethylenetriamine/nitric oxide for 2 hours GSM886283 2 Simple annotation: Stress, Miscellaneous Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19190.gif High aeration + 0.05mM DNO MTB strain 1254 Ctrl vs high aeration + 0.05 mM DETA/NO rep 1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886283 extract 2 total RNA P-GSE8839-5 GSM886283 LE 2 Cy5 P-GSE8839-6 GSM886283 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886283_sample_table.txt norm GSM886283_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.05 mM of diethylenetriamine/nitric oxide GSM886283 1 Simple annotation: Stress, Miscellaneous Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19190.gif Control MTB strain 1254 Ctrl vs high aeration + 0.05 mM DETA/NO rep 1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886283 extract 1 total RNA P-GSE8839-5 GSM886283 LE 1 Cy3 P-GSE8839-6 GSM886283 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886283_sample_table.txt norm GSM886283_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886282 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs//75628.gif Highaerationand0.05mMDNO MTB strain 1254 Ctrl vs high aeration + 0.05 mM DETA/NO rep 3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886282 extract 2 total RNA P-GSE8839-5 GSM886282 LE 2 Cy5 P-GSE8839-6 GSM886282 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886282_sample_table.txt norm GSM886282_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.05 mM of diethylenetriamine/nitric oxide GSM886282 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs//75628.gif 1254 No treatment MTB strain 1254 Ctrl vs high aeration + 0.05 mM DETA/NO rep 3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886282 extract 1 total RNA P-GSE8839-5 GSM886282 LE 1 Cy3 P-GSE8839-6 GSM886282 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886282_sample_table.txt norm GSM886282_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886281 2 Simple annotation: Stress, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19033.gif Strain: MTB strain 1254 Treatment: 0.005 mM DETA/NO for 40min MTB strain 1254 Ctrl vs 0.005 mM DETA/NO 40min rep 2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886281 extract 2 total RNA P-GSE8839-5 GSM886281 LE 2 Cy5 P-GSE8839-6 GSM886281 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886281_sample_table.txt norm GSM886281_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.005mM of diethylenetriamine/nitric oxide for 40 minutes GSM886281 1 Simple annotation: Stress, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19033.gif Strain: MTB strain 1254 Treatment: Control MTB strain 1254 Ctrl vs 0.005 mM DETA/NO 40min rep 2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886281 extract 1 total RNA P-GSE8839-5 GSM886281 LE 1 Cy3 P-GSE8839-6 GSM886281 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886281_sample_table.txt norm GSM886281_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886280 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75638.gif Lowaerationand0.005mMDNO MTB strain 1254 Ctrl vs low aeration + 0.005 mM DETA/NO rep 2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886280 extract 2 total RNA P-GSE8839-5 GSM886280 LE 2 Cy5 P-GSE8839-6 GSM886280 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886280_sample_table.txt norm GSM886280_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.005 mM of diethylenetriamine/nitric oxide GSM886280 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75638.gif 1254 No treatment MTB strain 1254 Ctrl vs low aeration + 0.005 mM DETA/NO rep 2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886280 extract 1 total RNA P-GSE8839-5 GSM886280 LE 1 Cy3 P-GSE8839-6 GSM886280 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886280_sample_table.txt norm GSM886280_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886279 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75656.gif CO NRP Day 4 H37 Rv3132-34 KO 0 days vs Rv3132-34 KO (complemented) hypoxia 4 day rep 3 Mycobacterium tuberculosis H37Rv-Delta-dosR::kan plus DosR P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886279 extract 2 total RNA P-GSE8839-5 GSM886279 LE 2 Cy5 P-GSE8839-6 GSM886279 A-GEOD-9901 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886279_sample_table.txt norm GSM886279_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv-Delta-dosR::kan plus DosR NRP (Wayne Growth)/4 days GSM886279 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75656.gif H37Rv No treatment H37 Rv3132-34 KO 0 days vs Rv3132-34 KO (complemented) hypoxia 4 day rep 3 Mycobacterium tuberculosis H37Rv-Delta-dosR::kan plus DosR P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886279 extract 1 total RNA P-GSE8839-5 GSM886279 LE 1 Cy3 P-GSE8839-6 GSM886279 A-GEOD-9901 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886279_sample_table.txt norm GSM886279_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv-Delta-dosR::kan plus DosR control EFO EFO_0001461 GSM886278 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75626.gif 1254 No treatment MTB strain 1254 Ctrl vs high aeration + 0.005 mM DETA/NO rep 3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886278 extract 1 total RNA P-GSE8839-5 GSM886278 LE 1 Cy3 P-GSE8839-6 GSM886278 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886278_sample_table.txt norm GSM886278_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886278 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75626.gif High aeration and 0.005mM DNO MTB strain 1254 Ctrl vs high aeration + 0.005 mM DETA/NO rep 3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886278 extract 2 total RNA P-GSE8839-5 GSM886278 LE 2 Cy5 P-GSE8839-6 GSM886278 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886278_sample_table.txt norm GSM886278_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.005 mM of diethylenetriamine/nitric oxide GSM886277 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75616.gif KCN0.5mM20mand0.05mMDNO40mn MTB strain 1254 Ctrl vs 0.5 mM KCN 20min + 0.05 mM DETA/NO 40min rep 3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886277 extract 2 total RNA P-GSE8839-5 GSM886277 LE 2 Cy5 P-GSE8839-6 GSM886277 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886277_sample_table.txt norm GSM886277_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.5mM Potassium cyanide plus 40 min. 0.05mM DNO GSM886277 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75616.gif 1254 No treatment MTB strain 1254 Ctrl vs 0.5 mM KCN 20min + 0.05 mM DETA/NO 40min rep 3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886277 extract 1 total RNA P-GSE8839-5 GSM886277 LE 1 Cy3 P-GSE8839-6 GSM886277 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886277_sample_table.txt norm GSM886277_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886276 2 Simple annotation: Stress, Miscellaneous Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19196.gif Low aeration + 0.001mM DNO MTB strain 1254 Ctrl vs low aeration + 0.001 mM DETA/NO rep 1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886276 extract 2 total RNA P-GSE8839-5 GSM886276 LE 2 Cy5 P-GSE8839-6 GSM886276 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886276_sample_table.txt norm GSM886276_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.001 mM of diethylenetriamine/nitric oxide GSM886276 1 Simple annotation: Stress, Miscellaneous Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19196.gif Control MTB strain 1254 Ctrl vs low aeration + 0.001 mM DETA/NO rep 1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886276 extract 1 total RNA P-GSE8839-5 GSM886276 LE 1 Cy3 P-GSE8839-6 GSM886276 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886276_sample_table.txt norm GSM886276_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886275 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75659.gif KO NRP Day 4 H37Rv 0 day ctrl vs Rv3132-34 KO hypoxia 4 day rep 2 Mycobacterium tuberculosis H37Rv-Delta-dosR::kan P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886275 extract 2 total RNA P-GSE8839-5 GSM886275 LE 2 Cy5 P-GSE8839-6 GSM886275 A-GEOD-9901 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886275_sample_table.txt norm GSM886275_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv-Delta-dosR::kan NRP (Wayne Growth)/4 days GSM886275 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75659.gif Rv3132 4KO No treatment H37Rv 0 day ctrl vs Rv3132-34 KO hypoxia 4 day rep 2 Mycobacterium tuberculosis H37Rv-Delta-dosR::kan P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886275 extract 1 total RNA P-GSE8839-5 GSM886275 LE 1 Cy3 P-GSE8839-6 GSM886275 A-GEOD-9901 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886275_sample_table.txt norm GSM886275_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv-Delta-dosR::kan control EFO EFO_0001461 GSM886274 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75577.gif 1254 No treatment MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 1hr rep 2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886274 extract 1 total RNA P-GSE8839-5 GSM886274 LE 1 Cy3 P-GSE8839-6 GSM886274 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886274_sample_table.txt norm GSM886274_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886274 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75577.gif 0.5mM DNO 1h MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 1hr rep 2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886274 extract 2 total RNA P-GSE8839-5 GSM886274 LE 2 Cy5 P-GSE8839-6 GSM886274 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886274_sample_table.txt norm GSM886274_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.5mM of diethylenetriamine/nitric oxide for 1 hour GSM886273 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19133.gif Control MTB strain 1254 Ctrl vs 2hr Hypoxia rep 2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886273 extract 1 total RNA P-GSE8839-5 GSM886273 LE 1 Cy3 P-GSE8839-6 GSM886273 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886273_sample_table.txt norm GSM886273_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886273 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19133.gif 1254 HypoxiaGP 2h MTB strain 1254 Ctrl vs 2hr Hypoxia rep 2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886273 extract 2 total RNA P-GSE8839-5 GSM886273 LE 2 Cy5 P-GSE8839-6 GSM886273 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886273_sample_table.txt norm GSM886273_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) Exposing for 2 hour to 0.2% O2 (hypoxia) GSM886272 2 Simple annotation: Stress, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19046.gif Strain: MTB strain 1254 Treatment: 5.0 mM DETA/NO for 40min MTB strain 1254 Ctrl vs 5.0 mM DETA/NO 40min rep 4 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886272 extract 2 total RNA P-GSE8839-5 GSM886272 LE 2 Cy5 P-GSE8839-6 GSM886272 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886272_sample_table.txt norm GSM886272_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 5.0mM of diethylenetriamine/nitric oxide for 40 minutes GSM886272 1 Simple annotation: Stress, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19046.gif Strain: MTB strain 1254 Treatment: Control MTB strain 1254 Ctrl vs 5.0 mM DETA/NO 40min rep 4 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886272 extract 1 total RNA P-GSE8839-5 GSM886272 LE 1 Cy3 P-GSE8839-6 GSM886272 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886272_sample_table.txt norm GSM886272_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886271 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75592.gif 0.5mM DNO 8h MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 8hrs rep 2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886271 extract 2 total RNA P-GSE8839-5 GSM886271 LE 2 Cy5 P-GSE8839-6 GSM886271 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886271_sample_table.txt norm GSM886271_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.5mM of diethylenetriamine/nitric oxide for 8 hours GSM886271 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75592.gif 1254 No treatment MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 8hrs rep 2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886271 extract 1 total RNA P-GSE8839-5 GSM886271 LE 1 Cy3 P-GSE8839-6 GSM886271 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886271_sample_table.txt norm GSM886271_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886270 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75586.gif 0.5mM DNO 2h MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 2hrs rep 4 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886270 extract 2 total RNA P-GSE8839-5 GSM886270 LE 2 Cy5 P-GSE8839-6 GSM886270 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886270_sample_table.txt norm GSM886270_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.5mM of diethylenetriamine/nitric oxide for 2 hours GSM886270 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75586.gif 1254 No treatment MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 2hrs rep 4 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886270 extract 1 total RNA P-GSE8839-5 GSM886270 LE 1 Cy3 P-GSE8839-6 GSM886270 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886270_sample_table.txt norm GSM886270_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886269 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75579.gif 1254 No treatment MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 1hr rep 3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886269 extract 1 total RNA P-GSE8839-5 GSM886269 LE 1 Cy3 P-GSE8839-6 GSM886269 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886269_sample_table.txt norm GSM886269_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886269 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75579.gif 0.5mM DNO 1h MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 1hr rep 3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886269 extract 2 total RNA P-GSE8839-5 GSM886269 LE 2 Cy5 P-GSE8839-6 GSM886269 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886269_sample_table.txt norm GSM886269_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.5mM of diethylenetriamine/nitric oxide for 1 hour GSM886268 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75651.gif H37Rv DS 0.05DNO 40min H37Rv Ctrl vs 0.05 mM DETA/NO 40min rep 4 Mycobacterium tuberculosis H37Rv (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886268 extract 2 total RNA P-GSE8839-5 GSM886268 LE 2 Cy5 P-GSE8839-6 GSM886268 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886268_sample_table.txt norm GSM886268_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv (wild_type) 0.05mM of diethylenetriamine/nitric oxide for 40 minutes GSM886268 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75651.gif H37Rv No treatment H37Rv Ctrl vs 0.05 mM DETA/NO 40min rep 4 Mycobacterium tuberculosis H37Rv (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886268 extract 1 total RNA P-GSE8839-5 GSM886268 LE 1 Cy3 P-GSE8839-6 GSM886268 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886268_sample_table.txt norm GSM886268_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv (wild_type) control EFO EFO_0001461 GSM886267 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75575.gif 1254 No treatment MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 1hr rep 1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886267 extract 1 total RNA P-GSE8839-5 GSM886267 LE 1 Cy3 P-GSE8839-6 GSM886267 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886267_sample_table.txt norm GSM886267_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886267 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75575.gif 0.5mM DNO 1h MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 1hr rep 1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886267 extract 2 total RNA P-GSE8839-5 GSM886267 LE 2 Cy5 P-GSE8839-6 GSM886267 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886267_sample_table.txt norm GSM886267_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.5mM of diethylenetriamine/nitric oxide for 1 hour GSM886266 1 Simple annotation: Stress, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19044.gif Strain: MTB strain 1254 Treatment: Control MTB strain 1254 Ctrl vs 5.0 mM DETA/NO 40min rep 2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886266 extract 1 total RNA P-GSE8839-5 GSM886266 LE 1 Cy3 P-GSE8839-6 GSM886266 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886266_sample_table.txt norm GSM886266_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886266 2 Simple annotation: Stress, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19044.gif Strain: MTB strain 1254 Treatment: 5.0 mM DETA/NO for 40min MTB strain 1254 Ctrl vs 5.0 mM DETA/NO 40min rep 2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886266 extract 2 total RNA P-GSE8839-5 GSM886266 LE 2 Cy5 P-GSE8839-6 GSM886266 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886266_sample_table.txt norm GSM886266_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 5.0mM of diethylenetriamine/nitric oxide for 40 minutes GSM886265 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75653.gif Rv3133COMP0.05DNO40min H37Rv ctrl vs Rv3132-34 KO (complemented) 0.05 mM DETA/NO 40min rep 4 Mycobacterium tuberculosis H37Rv-Delta-dosR::kan plus DosR P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886265 extract 2 total RNA P-GSE8839-5 GSM886265 LE 2 Cy5 P-GSE8839-6 GSM886265 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886265_sample_table.txt norm GSM886265_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv-Delta-dosR::kan plus DosR 0.05mM of diethylenetriamine/nitric oxide for 40 minutes GSM886265 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75653.gif Rv3133COMP0 No treatment H37Rv ctrl vs Rv3132-34 KO (complemented) 0.05 mM DETA/NO 40min rep 4 Mycobacterium tuberculosis H37Rv-Delta-dosR::kan plus DosR P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886265 extract 1 total RNA P-GSE8839-5 GSM886265 LE 1 Cy3 P-GSE8839-6 GSM886265 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886265_sample_table.txt norm GSM886265_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv-Delta-dosR::kan plus DosR control EFO EFO_0001461 GSM886264 1 Simple annotation: Strain Comparison, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75056.gif MTB1254 Day 0 MTB1254 Day 0 vs low Oxygen Day 4 rep 3 Mycobacterium tuberculosis H37Rv (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886264 extract 1 total RNA P-GSE8839-5 GSM886264 LE 1 Cy3 P-GSE8839-6 GSM886264 A-GEOD-9901 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886264_sample_table.txt norm GSM886264_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv (wild_type) control EFO EFO_0001461 GSM886264 2 Simple annotation: Strain Comparison, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75056.gif MTB1254 Day 4 MTB1254 Day 0 vs low Oxygen Day 4 rep 3 Mycobacterium tuberculosis H37Rv (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886264 extract 2 total RNA P-GSE8839-5 GSM886264 LE 2 Cy5 P-GSE8839-6 GSM886264 A-GEOD-9901 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886264_sample_table.txt norm GSM886264_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv (wild_type) NRP (Wayne Growth)/4 days GSM886263 1 Simple annotation: Stress, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/74757.gif Strain: MTB strain 1254 Treatment: Control MTB strain 1254 Ctrl vs 0.005 mM DETA/NO 40min rep 4 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886263 extract 1 total RNA P-GSE8839-5 GSM886263 LE 1 Cy3 P-GSE8839-6 GSM886263 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886263_sample_table.txt norm GSM886263_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886263 2 Simple annotation: Stress, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/74757.gif Strain: MTB strain 1254 Treatment: 0.005 mM DETA/NO for 40min MTB strain 1254 Ctrl vs 0.005 mM DETA/NO 40min rep 4 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886263 extract 2 total RNA P-GSE8839-5 GSM886263 LE 2 Cy5 P-GSE8839-6 GSM886263 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886263_sample_table.txt norm GSM886263_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.005mM of diethylenetriamine/nitric oxide for 40 minutes GSM886262 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75649.gif CDC1551 0.05DNO 40min CDC1551 Ctrl vs 0.05 mM DETA/NO 40 min rep 4 Mycobacterium tuberculosis CDC1551 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886262 extract 2 total RNA P-GSE8839-5 GSM886262 LE 2 Cy5 P-GSE8839-6 GSM886262 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886262_sample_table.txt norm GSM886262_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip CDC1551 (wild_type) 0.05mM of diethylenetriamine/nitric oxide for 40 minutes GSM886262 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75649.gif CDC1551 No treatment CDC1551 Ctrl vs 0.05 mM DETA/NO 40 min rep 4 Mycobacterium tuberculosis CDC1551 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886262 extract 1 total RNA P-GSE8839-5 GSM886262 LE 1 Cy3 P-GSE8839-6 GSM886262 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886262_sample_table.txt norm GSM886262_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip CDC1551 (wild_type) control EFO EFO_0001461 GSM886261 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75603.gif 0.5mM DNO 24h MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 24hrs rep 1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886261 extract 2 total RNA P-GSE8839-5 GSM886261 LE 2 Cy5 P-GSE8839-6 GSM886261 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886261_sample_table.txt norm GSM886261_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.5mM of diethylenetriamine/nitric oxide for 24 hours GSM886261 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75603.gif 1254 No treatment MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 24hrs rep 1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886261 extract 1 total RNA P-GSE8839-5 GSM886261 LE 1 Cy3 P-GSE8839-6 GSM886261 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886261_sample_table.txt norm GSM886261_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886260 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75618.gif KCN 0.5mM GasPak 2h MTB strain 1254 Ctrl vs 0.5 mM KCN + 2hr hypoxia rep 2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886260 extract 2 total RNA P-GSE8839-5 GSM886260 LE 2 Cy5 P-GSE8839-6 GSM886260 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886260_sample_table.txt norm GSM886260_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.5mM Potassium cyanide plus 2 hours-hipoxia GSM886260 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75618.gif 1254 No treatment MTB strain 1254 Ctrl vs 0.5 mM KCN + 2hr hypoxia rep 2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886260 extract 1 total RNA P-GSE8839-5 GSM886260 LE 1 Cy3 P-GSE8839-6 GSM886260 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886260_sample_table.txt norm GSM886260_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886259 1 Simple annotation: Strain Comparison, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75092.gif MTB1254 Day 0 MTB1254 Day 0 rep 3 Mycobacterium tuberculosis H37Rv (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886259 extract 1 total RNA P-GSE8839-5 GSM886259 LE 1 Cy3 P-GSE8839-6 GSM886259 A-GEOD-9901 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886259_sample_table.txt norm GSM886259_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv (wild_type) control EFO EFO_0001461 GSM886259 2 Simple annotation: Strain Comparison, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75092.gif MTB1254 Day 0 MTB1254 Day 0 rep 3 Mycobacterium tuberculosis H37Rv (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886259 extract 2 total RNA P-GSE8839-5 GSM886259 LE 2 Cy5 P-GSE8839-6 GSM886259 A-GEOD-9901 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886259_sample_table.txt norm GSM886259_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv (wild_type) Control (Growth curve) 0 days GSM886258 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75624.gif Highaerationand0.01mMDNO MTB strain 1254 Ctrl vs high aeration + 0.01 mM DETA/NO rep 3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886258 extract 2 total RNA P-GSE8839-5 GSM886258 LE 2 Cy5 P-GSE8839-6 GSM886258 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886258_sample_table.txt norm GSM886258_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.01 mM of diethylenetriamine/nitric oxide GSM886258 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75624.gif 1254 No treatment MTB strain 1254 Ctrl vs high aeration + 0.01 mM DETA/NO rep 3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886258 extract 1 total RNA P-GSE8839-5 GSM886258 LE 1 Cy3 P-GSE8839-6 GSM886258 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886258_sample_table.txt norm GSM886258_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886257 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75641.gif Lowaerationand0.05mMDNO MTB strain 1254 Ctrl vs low aeration + 0.05 mM DETA/NO rep 2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886257 extract 2 total RNA P-GSE8839-5 GSM886257 LE 2 Cy5 P-GSE8839-6 GSM886257 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886257_sample_table.txt norm GSM886257_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.05 mM of diethylenetriamine/nitric oxide GSM886257 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75641.gif 1254 No treatment MTB strain 1254 Ctrl vs low aeration + 0.05 mM DETA/NO rep 2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886257 extract 1 total RNA P-GSE8839-5 GSM886257 LE 1 Cy3 P-GSE8839-6 GSM886257 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886257_sample_table.txt norm GSM886257_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886256 2 Simple annotation: Stress, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19042.gif Strain: MTB strain 1254 Treatment: 0.5 mM DETA/NO for 40min MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 40min rep 2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886256 extract 2 total RNA P-GSE8839-5 GSM886256 LE 2 Cy5 P-GSE8839-6 GSM886256 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886256_sample_table.txt norm GSM886256_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.5mM of diethylenetriamine/nitric oxide for 40 minutes GSM886256 1 Simple annotation: Stress, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19042.gif Strain: MTB strain 1254 Treatment: Control MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 40min rep 2 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886256 extract 1 total RNA P-GSE8839-5 GSM886256 LE 1 Cy3 P-GSE8839-6 GSM886256 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886256_sample_table.txt norm GSM886256_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886255 1 Simple annotation: Stress, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/74759.gif Strain: MTB strain 1254 Treatment: Control MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 40min rep 3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886255 extract 1 total RNA P-GSE8839-5 GSM886255 LE 1 Cy3 P-GSE8839-6 GSM886255 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886255_sample_table.txt norm GSM886255_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886255 2 Simple annotation: Stress, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/74759.gif Strain: MTB strain 1254 Treatment: 0.5 mM DETA/NO for 40min MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 40min rep 3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886255 extract 2 total RNA P-GSE8839-5 GSM886255 LE 2 Cy5 P-GSE8839-6 GSM886255 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886255_sample_table.txt norm GSM886255_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.5mM of diethylenetriamine/nitric oxide for 40 minutes GSM886254 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75637.gif 1254 No treatment MTB strain 1254 Ctrl vs low aeration + 0.005 mM DETA/NO rep 1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886254 extract 1 total RNA P-GSE8839-5 GSM886254 LE 1 Cy3 P-GSE8839-6 GSM886254 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886254_sample_table.txt norm GSM886254_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886254 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75637.gif Lowaerationand0.005mMDNO MTB strain 1254 Ctrl vs low aeration + 0.005 mM DETA/NO rep 1 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886254 extract 2 total RNA P-GSE8839-5 GSM886254 LE 2 Cy5 P-GSE8839-6 GSM886254 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886254_sample_table.txt norm GSM886254_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.005 mM of diethylenetriamine/nitric oxide GSM886253 2 Simple annotation: Stress, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2001-07/18440.gif Strain: MTB strain 1254 Treatment: 0.05 mM DETA/NO for 40min MTB strain 1254 Ctrl vs 0.05 mM DETA/NO 40min rep 3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886253 extract 2 total RNA P-GSE8839-5 GSM886253 LE 2 Cy5 P-GSE8839-6 GSM886253 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886253_sample_table.txt norm GSM886253_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.05mM of diethylenetriamine/nitric oxide for 40 minutes GSM886253 1 Simple annotation: Stress, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2001-07/18440.gif Strain: MTB strain 1254 Treatment: Control MTB strain 1254 Ctrl vs 0.05 mM DETA/NO 40min rep 3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886253 extract 1 total RNA P-GSE8839-5 GSM886253 LE 1 Cy3 P-GSE8839-6 GSM886253 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886253_sample_table.txt norm GSM886253_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886252 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75597.gif 0.5mM DNO 16h MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 16hrs rep 3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886252 extract 2 total RNA P-GSE8839-5 GSM886252 LE 2 Cy5 P-GSE8839-6 GSM886252 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886252_sample_table.txt norm GSM886252_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.5mM of diethylenetriamine/nitric oxide for 16 hours GSM886252 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75597.gif 1254 No treatment MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 16hrs rep 3 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886252 extract 1 total RNA P-GSE8839-5 GSM886252 LE 1 Cy3 P-GSE8839-6 GSM886252 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886252_sample_table.txt norm GSM886252_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886251 1 Simple annotation: Stress, Miscellaneous Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19146.gif Control H37Rv ctrl vs Rv3132-3134 KO 0.05 mM DETA/NO 40min rep 2 Mycobacterium tuberculosis H37Rv-Delta-dosR::kan P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886251 extract 1 total RNA P-GSE8839-5 GSM886251 LE 1 Cy3 P-GSE8839-6 GSM886251 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886251_sample_table.txt norm GSM886251_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv-Delta-dosR::kan control EFO EFO_0001461 GSM886251 2 Simple annotation: Stress, Miscellaneous Image: http://smd.stanford.edu/MicroArray/gifs/2001-08/19146.gif Rv3132-4KO 0.05mM DNO 40m H37Rv ctrl vs Rv3132-3134 KO 0.05 mM DETA/NO 40min rep 2 Mycobacterium tuberculosis H37Rv-Delta-dosR::kan P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886251 extract 2 total RNA P-GSE8839-5 GSM886251 LE 2 Cy5 P-GSE8839-6 GSM886251 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886251_sample_table.txt norm GSM886251_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv-Delta-dosR::kan 0.05mM of diethylenetriamine/nitric oxide for 40 minutes GSM886250 1 Simple annotation: Stress, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/74760.gif Strain: MTB strain 1254 Treatment: Control MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 40min rep 4 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886250 extract 1 total RNA P-GSE8839-5 GSM886250 LE 1 Cy3 P-GSE8839-6 GSM886250 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886250_sample_table.txt norm GSM886250_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) control EFO EFO_0001461 GSM886250 2 Simple annotation: Stress, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/74760.gif Strain: MTB strain 1254 Treatment: 0.5 mM DETA/NO for 40min MTB strain 1254 Ctrl vs 0.5 mM DETA/NO 40min rep 4 Mycobacterium tuberculosis 1254 (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886250 extract 2 total RNA P-GSE8839-5 GSM886250 LE 2 Cy5 P-GSE8839-6 GSM886250 A-GEOD-8561 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886250_sample_table.txt norm GSM886250_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip 1254 (wild_type) 0.5mM of diethylenetriamine/nitric oxide for 40 minutes GSM886249 2 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75661.gif KO NRP Day 4 H37Rv 0 day ctrl vs Rv3132-34 KO hypoxia 4 day rep 4 Mycobacterium tuberculosis H37Rv-Delta-dosR::kan P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886249 extract 2 total RNA P-GSE8839-5 GSM886249 LE 2 Cy5 P-GSE8839-6 GSM886249 A-GEOD-9901 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886249_sample_table.txt norm GSM886249_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv-Delta-dosR::kan NRP (Wayne Growth)/4 days GSM886249 1 Simple annotation: Stress, Strain Comparison Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75661.gif Rv3132 4KO No treatment H37Rv 0 day ctrl vs Rv3132-34 KO hypoxia 4 day rep 4 Mycobacterium tuberculosis H37Rv-Delta-dosR::kan P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886249 extract 1 total RNA P-GSE8839-5 GSM886249 LE 1 Cy3 P-GSE8839-6 GSM886249 A-GEOD-9901 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886249_sample_table.txt norm GSM886249_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv-Delta-dosR::kan control EFO EFO_0001461 GSM886248 2 Simple annotation: Strain Comparison, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75054.gif MTB1254 Day 4 MTB1254 Day 0 vs low Oxygen Day 4 rep 1 Mycobacterium tuberculosis H37Rv (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886248 extract 2 total RNA P-GSE8839-5 GSM886248 LE 2 Cy5 P-GSE8839-6 GSM886248 A-GEOD-9901 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886248_sample_table.txt norm GSM886248_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv (wild_type) NRP (Wayne Growth)/4 days GSM886248 1 Simple annotation: Strain Comparison, Stress by growth condition Image: http://smd.stanford.edu/MicroArray/gifs/2007-06/75054.gif MTB1254 Day 0 MTB1254 Day 0 vs low Oxygen Day 4 rep 1 Mycobacterium tuberculosis H37Rv (wild_type) P-GSE8839-3 P-GSE8839-2 P-GSE8839-4 GSM886248 extract 1 total RNA P-GSE8839-5 GSM886248 LE 1 Cy3 P-GSE8839-6 GSM886248 A-GEOD-9901 P-GSE8839-7 P-GSE8839-8 P-GSE8839-1 GSM886248_sample_table.txt norm GSM886248_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-8839/E-GEOD-8839.processed.1.zip H37Rv (wild_type) control EFO EFO_0001461