Source Name	Comment [ENA_SAMPLE]	Comment [Sample_description]	Comment [Sample_source_name]	Comment [Sample_title]	Characteristics [growth phase]	Characteristics [organism]	Term Source REF	Term Accession Number	Characteristics [strain]	Term Source REF	Term Accession Number	Protocol REF	Term Source REF	Protocol REF	Term Source REF	Protocol REF	Term Source REF	Extract Name	Comment [INSTRUMENT_MODEL]	Comment [LIBRARY_LAYOUT]	Comment [LIBRARY_SELECTION]	Comment [LIBRARY_SOURCE]	Comment [LIBRARY_STRATEGY]	Material Type	Assay Name	Comment [ENA_EXPERIMENT]	Comment [Platform_title]	Technology Type	Protocol REF	Term Source REF	Scan Name	Comment [ENA_RUN]	Derived Array Data File	Comment [Derived ArrayExpress FTP file]	FactorValue [GROWTH PHASE]	FactorValue [ORGANISM]	Term Source REF	Term Accession Number	FactorValue [STRAIN]	Term Source REF	Term Accession Number
GSM1406442 1	SRS630472	Sp heat shock treatment (HS) RNA-Seq Sp_HS1	Yeast S. paradoxus strain a-CC154	Sp heat shock treatment (HS) RNA-Seq	  	Saccharomyces paradoxus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_27291	a-CC154	  	  	P-GSE58319-1	ArrayExpress	P-GSE58319-2	ArrayExpress	P-GSE58319-3	ArrayExpress	GSM1406442 extract 1	Illumina HiSeq 2000	PAIRED	cDNA	transcriptomic	RNA-Seq	total RNA	GSM1406442	SRX581805	Illumina HiSeq 2000 (Saccharomyces paradoxus)	sequencing assay	P-GSE58319-4	ArrayExpress	SRR1363439	SRR1363439	GSM1406442_Sp_HS_BPKM.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-58319/E-GEOD-58319.processed.1.zip	not specified	Saccharomyces paradoxus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_27291	a-CC154	  	        
GSM1406441 1	SRS630470	Sp early stationary phase (ES) RNA-Seq Sp_ES1	Yeast S. paradoxus strain a-CC154	Sp early stationary phase (ES) RNA-Seq	early stationary phase	Saccharomyces paradoxus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_27291	a-CC154	  	  	P-GSE58319-1	ArrayExpress	P-GSE58319-2	ArrayExpress	P-GSE58319-3	ArrayExpress	GSM1406441 extract 1	Illumina HiSeq 2000	PAIRED	cDNA	transcriptomic	RNA-Seq	total RNA	GSM1406441	SRX581804	Illumina HiSeq 2000 (Saccharomyces paradoxus)	sequencing assay	P-GSE58319-4	ArrayExpress	SRR1363438	SRR1363438	GSM1406441_Sp_ES_BPKM.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-58319/E-GEOD-58319.processed.1.zip	early stationary phase	Saccharomyces paradoxus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_27291	a-CC154	  	        
GSM1406440 1	SRS630469	Sp mid-log phase (ML) RNA-Seq Sp_ML1	Yeast S. paradoxus strain a-CC154	Sp mid-log phase (ML) RNA-Seq	mid-log phase	Saccharomyces paradoxus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_27291	a-CC154	  	  	P-GSE58319-1	ArrayExpress	P-GSE58319-2	ArrayExpress	P-GSE58319-3	ArrayExpress	GSM1406440 extract 1	Illumina HiSeq 2000	PAIRED	cDNA	transcriptomic	RNA-Seq	total RNA	GSM1406440	SRX581803	Illumina HiSeq 2000 (Saccharomyces paradoxus)	sequencing assay	P-GSE58319-4	ArrayExpress	SRR1363437	SRR1363437	GSM1406440_Sp_ML_BPKM.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-58319/E-GEOD-58319.processed.1.zip	mid-log phase	Saccharomyces paradoxus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_27291	a-CC154	  	        
GSM1406439 1	SRS630468	Sc heat shock treatment (HS) RNA-Seq Sc_HS1	Yeast S. cerevisiae strain BY4741	Sc heat shock treatment (HS) RNA-Seq	  	Saccharomyces cerevisiae	EFO	http://purl.obolibrary.org/obo/NCBITaxon_4932	BY4741	EFO	EFO_0000098	P-GSE58319-1	ArrayExpress	P-GSE58319-2	ArrayExpress	P-GSE58319-3	ArrayExpress	GSM1406439 extract 1	Illumina HiSeq 2000	PAIRED	cDNA	transcriptomic	RNA-Seq	total RNA	GSM1406439	SRX581802	Illumina HiSeq 2000 (Saccharomyces cerevisiae)	sequencing assay	P-GSE58319-4	ArrayExpress	SRR1363436	SRR1363436	GSM1406439_Sc_HS_BPKM.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-58319/E-GEOD-58319.processed.1.zip	not specified	Saccharomyces cerevisiae	EFO	http://purl.obolibrary.org/obo/NCBITaxon_4932	BY4741	EFO	EFO_0000098
GSM1406438 1	SRS630471	Sc early stationary phase (ES) RNA-Seq Sc_ES1	Yeast S. cerevisiae strain BY4741	Sc early stationary phase (ES) RNA-Seq	early stationary phase	Saccharomyces cerevisiae	EFO	http://purl.obolibrary.org/obo/NCBITaxon_4932	BY4741	EFO	EFO_0000098	P-GSE58319-1	ArrayExpress	P-GSE58319-2	ArrayExpress	P-GSE58319-3	ArrayExpress	GSM1406438 extract 1	Illumina HiSeq 2000	PAIRED	cDNA	transcriptomic	RNA-Seq	total RNA	GSM1406438	SRX581801	Illumina HiSeq 2000 (Saccharomyces cerevisiae)	sequencing assay	P-GSE58319-4	ArrayExpress	SRR1363435	SRR1363435	GSM1406438_Sc_ES_BPKM.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-58319/E-GEOD-58319.processed.1.zip	early stationary phase	Saccharomyces cerevisiae	EFO	http://purl.obolibrary.org/obo/NCBITaxon_4932	BY4741	EFO	EFO_0000098
GSM1406437 1	SRS630466	Sc mid-log phase (ML) RNA-Seq Sc_ML1	Yeast S. cerevisiae strain BY4741	Sc mid-log phase (ML) RNA-Seq	mid-log phase	Saccharomyces cerevisiae	EFO	http://purl.obolibrary.org/obo/NCBITaxon_4932	BY4741	EFO	EFO_0000098	P-GSE58319-1	ArrayExpress	P-GSE58319-2	ArrayExpress	P-GSE58319-3	ArrayExpress	GSM1406437 extract 1	Illumina HiSeq 2000	PAIRED	cDNA	transcriptomic	RNA-Seq	total RNA	GSM1406437	SRX581800	Illumina HiSeq 2000 (Saccharomyces cerevisiae)	sequencing assay	P-GSE58319-4	ArrayExpress	SRR1363434	SRR1363434	GSM1406437_Sc_ML_BPKM.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-58319/E-GEOD-58319.processed.1.zip	mid-log phase	Saccharomyces cerevisiae	EFO	http://purl.obolibrary.org/obo/NCBITaxon_4932	BY4741	EFO	EFO_0000098