Source Name Comment [ENA_SAMPLE] Comment [Sample_description] Comment [Sample_source_name] Comment [Sample_title] Characteristics [organism] Term Source REF Term Accession Number Characteristics [strain] Protocol REF Term Source REF Protocol REF Term Source REF Protocol REF Term Source REF Extract Name Comment [INSTRUMENT_MODEL] Comment [LIBRARY_LAYOUT] Comment [LIBRARY_SELECTION] Comment [LIBRARY_SOURCE] Comment [LIBRARY_STRATEGY] Material Type Assay Name Comment [ENA_EXPERIMENT] Comment [Platform_title] Technology Type Protocol REF Term Source REF Scan Name Comment [ENA_RUN] Comment [FASTQ_URI] Derived Array Data File Comment [Derived ArrayExpress FTP file] FactorValue [TREATMENT] GSM1358429 1 SRS583089 exposed to 5% heat-inactived human serum Bordetella holmesii ATCC51541T ATCC_5pct Bordetella holmesii EFO http://purl.obolibrary.org/obo/NCBITaxon_35814 ATCC51541T P-GSE56290-1 ArrayExpress P-GSE56290-2 ArrayExpress P-GSE56290-3 ArrayExpress GSM1358429 extract 1 Illumina HiSeq 2000 PAIRED cDNA transcriptomic RNA-Seq total RNA GSM1358429 SRX502108 Illumina HiSeq 2000 (Bordetella holmesii) sequencing assay P-GSE56290-4 ArrayExpress SRR1206299_2.fastq.gz SRR1206299 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR120/009/SRR1206299/SRR1206299_2.fastq.gz GSM1358429_ATCC_5pct.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-56290/E-GEOD-56290.processed.1.zip 5% heat-inactivated human serum GSM1358429 1 SRS583089 exposed to 5% heat-inactived human serum Bordetella holmesii ATCC51541T ATCC_5pct Bordetella holmesii EFO http://purl.obolibrary.org/obo/NCBITaxon_35814 ATCC51541T P-GSE56290-1 ArrayExpress P-GSE56290-2 ArrayExpress P-GSE56290-3 ArrayExpress GSM1358429 extract 1 Illumina HiSeq 2000 PAIRED cDNA transcriptomic RNA-Seq total RNA GSM1358429 SRX502108 Illumina HiSeq 2000 (Bordetella holmesii) sequencing assay P-GSE56290-4 ArrayExpress SRR1206299_1.fastq.gz SRR1206299 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR120/009/SRR1206299/SRR1206299_1.fastq.gz GSM1358429_ATCC_5pct.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-56290/E-GEOD-56290.processed.1.zip 5% heat-inactivated human serum GSM1358428 1 SRS583088 no serum control Bordetella holmesii ATCC51541T ATCC_0pct Bordetella holmesii EFO http://purl.obolibrary.org/obo/NCBITaxon_35814 ATCC51541T P-GSE56290-1 ArrayExpress P-GSE56290-2 ArrayExpress P-GSE56290-3 ArrayExpress GSM1358428 extract 1 Illumina HiSeq 2000 PAIRED cDNA transcriptomic RNA-Seq total RNA GSM1358428 SRX502107 Illumina HiSeq 2000 (Bordetella holmesii) sequencing assay P-GSE56290-4 ArrayExpress SRR1206298_2.fastq.gz SRR1206298 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR120/008/SRR1206298/SRR1206298_2.fastq.gz GSM1358428_ATCC_0pct.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-56290/E-GEOD-56290.processed.1.zip no serum control GSM1358428 1 SRS583088 no serum control Bordetella holmesii ATCC51541T ATCC_0pct Bordetella holmesii EFO http://purl.obolibrary.org/obo/NCBITaxon_35814 ATCC51541T P-GSE56290-1 ArrayExpress P-GSE56290-2 ArrayExpress P-GSE56290-3 ArrayExpress GSM1358428 extract 1 Illumina HiSeq 2000 PAIRED cDNA transcriptomic RNA-Seq total RNA GSM1358428 SRX502107 Illumina HiSeq 2000 (Bordetella holmesii) sequencing assay P-GSE56290-4 ArrayExpress SRR1206298_1.fastq.gz SRR1206298 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR120/008/SRR1206298/SRR1206298_1.fastq.gz GSM1358428_ATCC_0pct.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-56290/E-GEOD-56290.processed.1.zip no serum control GSM1358427 1 SRS583087 exposed to .5% heat-inactivated human serum Bordetella holmesii ATCC51541T ATCC_0_5pct Bordetella holmesii EFO http://purl.obolibrary.org/obo/NCBITaxon_35814 ATCC51541T P-GSE56290-1 ArrayExpress P-GSE56290-2 ArrayExpress P-GSE56290-3 ArrayExpress GSM1358427 extract 1 Illumina HiSeq 2000 PAIRED cDNA transcriptomic RNA-Seq total RNA GSM1358427 SRX502106 Illumina HiSeq 2000 (Bordetella holmesii) sequencing assay P-GSE56290-4 ArrayExpress SRR1206297_2.fastq.gz SRR1206297 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR120/007/SRR1206297/SRR1206297_2.fastq.gz GSM1358427_ATCC_0_5pct.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-56290/E-GEOD-56290.processed.1.zip 0.5% heat-inactivated human serum GSM1358427 1 SRS583087 exposed to .5% heat-inactivated human serum Bordetella holmesii ATCC51541T ATCC_0_5pct Bordetella holmesii EFO http://purl.obolibrary.org/obo/NCBITaxon_35814 ATCC51541T P-GSE56290-1 ArrayExpress P-GSE56290-2 ArrayExpress P-GSE56290-3 ArrayExpress GSM1358427 extract 1 Illumina HiSeq 2000 PAIRED cDNA transcriptomic RNA-Seq total RNA GSM1358427 SRX502106 Illumina HiSeq 2000 (Bordetella holmesii) sequencing assay P-GSE56290-4 ArrayExpress SRR1206297_1.fastq.gz SRR1206297 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR120/007/SRR1206297/SRR1206297_1.fastq.gz GSM1358427_ATCC_0_5pct.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-56290/E-GEOD-56290.processed.1.zip 0.5% heat-inactivated human serum