Source Name Comment [Sample_description] Comment [Sample_source_name] Comment [Sample_title] Provider Characteristics [cell line] Characteristics [cell subpopulation] Term Source REF Term Accession Number Characteristics [organism] Term Source REF Term Accession Number Protocol REF Term Source REF Protocol REF Term Source REF Protocol REF Term Source REF Extract Name Material Type Protocol REF Term Source REF Labeled Extract Name Label Protocol REF Term Source REF Assay Name Array Design REF Term Source REF Technology Type Protocol REF Term Source REF Protocol REF Term Source REF Normalization Name Derived Array Data File Comment [Derived ArrayExpress FTP file] FactorValue [CELL LINE] FactorValue [CELL SUBPOPULATION] Term Source REF Term Accession Number GSM1244708 1 20130618_205635370814_MCF10A Stem_02.RCC MCF10A Stem MCF10A Stem MCF10A stem EFO EFO_0001040 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE54735-8 ArrayExpress P-GSE54735-7 ArrayExpress P-GSE54735-9 ArrayExpress GSM1244708 extract 1 total RNA P-GSE54735-10 ArrayExpress GSM1244708 LE 1 n/a P-GSE54735-11 ArrayExpress GSM1244708 A-GEOD-17784 ArrayExpress array assay P-GSE54735-12 ArrayExpress P-GSE54735-2 ArrayExpress GSM1244708_sample_table.txt norm GSM1244708_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54735/E-GEOD-54735.processed.1.zip MCF10A stem EFO EFO_0001040 GSM1244707 1 20130618_205635370814_MCF10A Luminal_01.RCC MCF10A Luminal MCF10A Luminal MCF10A Luminal EFO http://purl.obolibrary.org/obo/CHEBI_8069 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE54735-8 ArrayExpress P-GSE54735-7 ArrayExpress P-GSE54735-9 ArrayExpress GSM1244707 extract 1 total RNA P-GSE54735-10 ArrayExpress GSM1244707 LE 1 n/a P-GSE54735-11 ArrayExpress GSM1244707 A-GEOD-17784 ArrayExpress array assay P-GSE54735-12 ArrayExpress P-GSE54735-2 ArrayExpress GSM1244707_sample_table.txt norm GSM1244707_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54735/E-GEOD-54735.processed.1.zip MCF10A Luminal EFO http://purl.obolibrary.org/obo/CHEBI_8069 GSM1244706 1 20130618_205635370814_MCF10A Basal_03.RCC MCF10A Basal MCF10A Basal MCF10A basal EFO EFO_0001654 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE54735-8 ArrayExpress P-GSE54735-7 ArrayExpress P-GSE54735-9 ArrayExpress GSM1244706 extract 1 total RNA P-GSE54735-10 ArrayExpress GSM1244706 LE 1 n/a P-GSE54735-11 ArrayExpress GSM1244706 A-GEOD-17784 ArrayExpress array assay P-GSE54735-12 ArrayExpress P-GSE54735-2 ArrayExpress GSM1244706_sample_table.txt norm GSM1244706_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54735/E-GEOD-54735.processed.1.zip MCF10A basal EFO EFO_0001654 GSM1227983 1 MCF10A-shSlugpool vs MCF10AControlpoola MCF10A-Controlpool MCF10A-shSlugpool vs MCF10AControlpoola CK Lab MCF10A Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 ArrayExpress ArrayExpress P-GSE54735-3 ArrayExpress GSM1227983 extract 1 total RNA P-GSE54735-4 ArrayExpress GSM1227983 LE 1 Cy3 P-GSE54735-5 ArrayExpress GSM1227983 A-GEOD-10481 ArrayExpress array assay P-GSE54735-6 ArrayExpress P-GSE54735-1 ArrayExpress GSM1227983_sample_table.txt norm GSM1227983_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54735/E-GEOD-54735.processed.1.zip MCF10A not specified GSM1227983 2 MCF10A-shSlugpool vs MCF10AControlpoola MCF10A-shSlugpool MCF10A-shSlugpool vs MCF10AControlpoola CK Lab MCF10A Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 ArrayExpress ArrayExpress P-GSE54735-3 ArrayExpress GSM1227983 extract 2 total RNA P-GSE54735-4 ArrayExpress GSM1227983 LE 2 Cy5 P-GSE54735-5 ArrayExpress GSM1227983 A-GEOD-10481 ArrayExpress array assay P-GSE54735-6 ArrayExpress P-GSE54735-1 ArrayExpress GSM1227983_sample_table.txt norm GSM1227983_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54735/E-GEOD-54735.processed.1.zip MCF10A not specified GSM1227982 2 MCF10A-shSlugpool vs MCF10AControlpool2 MCF10A-shSlugpool MCF10A-shSlugpool vs MCF10AControlpool2 CK Lab MCF10A Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 ArrayExpress ArrayExpress P-GSE54735-3 ArrayExpress GSM1227982 extract 2 total RNA P-GSE54735-4 ArrayExpress GSM1227982 LE 2 Cy5 P-GSE54735-5 ArrayExpress GSM1227982 A-GEOD-10481 ArrayExpress array assay P-GSE54735-6 ArrayExpress P-GSE54735-1 ArrayExpress GSM1227982_sample_table.txt norm GSM1227982_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54735/E-GEOD-54735.processed.1.zip MCF10A not specified GSM1227982 1 MCF10A-shSlugpool vs MCF10AControlpool2 MCF10A-Controlpool MCF10A-shSlugpool vs MCF10AControlpool2 CK Lab MCF10A Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 ArrayExpress ArrayExpress P-GSE54735-3 ArrayExpress GSM1227982 extract 1 total RNA P-GSE54735-4 ArrayExpress GSM1227982 LE 1 Cy3 P-GSE54735-5 ArrayExpress GSM1227982 A-GEOD-10481 ArrayExpress array assay P-GSE54735-6 ArrayExpress P-GSE54735-1 ArrayExpress GSM1227982_sample_table.txt norm GSM1227982_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54735/E-GEOD-54735.processed.1.zip MCF10A not specified GSM1227981 2 MCF10A-shSlugpool vs MCF10AControlpool MCF10A-shSlugpool MCF10A-shSlugpool vs MCF10AControlpool CK Lab MCF10A Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 ArrayExpress ArrayExpress P-GSE54735-3 ArrayExpress GSM1227981 extract 2 total RNA P-GSE54735-4 ArrayExpress GSM1227981 LE 2 Cy5 P-GSE54735-5 ArrayExpress GSM1227981 A-GEOD-10481 ArrayExpress array assay P-GSE54735-6 ArrayExpress P-GSE54735-1 ArrayExpress GSM1227981_sample_table.txt norm GSM1227981_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54735/E-GEOD-54735.processed.1.zip MCF10A not specified GSM1227981 1 MCF10A-shSlugpool vs MCF10AControlpool MCF10A-Controlpool MCF10A-shSlugpool vs MCF10AControlpool CK Lab MCF10A Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 ArrayExpress ArrayExpress P-GSE54735-3 ArrayExpress GSM1227981 extract 1 total RNA P-GSE54735-4 ArrayExpress GSM1227981 LE 1 Cy3 P-GSE54735-5 ArrayExpress GSM1227981 A-GEOD-10481 ArrayExpress array assay P-GSE54735-6 ArrayExpress P-GSE54735-1 ArrayExpress GSM1227981_sample_table.txt norm GSM1227981_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54735/E-GEOD-54735.processed.1.zip MCF10A not specified GSM1227980 1 MCF10A-shLSD1pool vs MCF10AControlpoola MCF10A-Controlpool MCF10A-shLSD1pool vs MCF10AControlpoola CK Lab MCF10A Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 ArrayExpress ArrayExpress P-GSE54735-3 ArrayExpress GSM1227980 extract 1 total RNA P-GSE54735-4 ArrayExpress GSM1227980 LE 1 Cy3 P-GSE54735-5 ArrayExpress GSM1227980 A-GEOD-10481 ArrayExpress array assay P-GSE54735-6 ArrayExpress P-GSE54735-1 ArrayExpress GSM1227980_sample_table.txt norm GSM1227980_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54735/E-GEOD-54735.processed.1.zip MCF10A not specified GSM1227980 2 MCF10A-shLSD1pool vs MCF10AControlpoola MCF10A-shLSD1pool MCF10A-shLSD1pool vs MCF10AControlpoola CK Lab MCF10A Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 ArrayExpress ArrayExpress P-GSE54735-3 ArrayExpress GSM1227980 extract 2 total RNA P-GSE54735-4 ArrayExpress GSM1227980 LE 2 Cy5 P-GSE54735-5 ArrayExpress GSM1227980 A-GEOD-10481 ArrayExpress array assay P-GSE54735-6 ArrayExpress P-GSE54735-1 ArrayExpress GSM1227980_sample_table.txt norm GSM1227980_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54735/E-GEOD-54735.processed.1.zip MCF10A not specified GSM1227979 1 MCF10A-shLSD1pool vs MCF10AControlpool2 MCF10A-Controlpool MCF10A-shLSD1pool vs MCF10AControlpool2 CK Lab MCF10A Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 ArrayExpress ArrayExpress P-GSE54735-3 ArrayExpress GSM1227979 extract 1 total RNA P-GSE54735-4 ArrayExpress GSM1227979 LE 1 Cy3 P-GSE54735-5 ArrayExpress GSM1227979 A-GEOD-10481 ArrayExpress array assay P-GSE54735-6 ArrayExpress P-GSE54735-1 ArrayExpress GSM1227979_sample_table.txt norm GSM1227979_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54735/E-GEOD-54735.processed.1.zip MCF10A not specified GSM1227979 2 MCF10A-shLSD1pool vs MCF10AControlpool2 MCF10A-shLSD1pool MCF10A-shLSD1pool vs MCF10AControlpool2 CK Lab MCF10A Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 ArrayExpress ArrayExpress P-GSE54735-3 ArrayExpress GSM1227979 extract 2 total RNA P-GSE54735-4 ArrayExpress GSM1227979 LE 2 Cy5 P-GSE54735-5 ArrayExpress GSM1227979 A-GEOD-10481 ArrayExpress array assay P-GSE54735-6 ArrayExpress P-GSE54735-1 ArrayExpress GSM1227979_sample_table.txt norm GSM1227979_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54735/E-GEOD-54735.processed.1.zip MCF10A not specified GSM1227978 1 MCF10A-shLSD1pool vs MCF10AControlpool MCF10A-Controlpool MCF10A-shLSD1pool vs MCF10AControlpool CK Lab MCF10A Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 ArrayExpress ArrayExpress P-GSE54735-3 ArrayExpress GSM1227978 extract 1 total RNA P-GSE54735-4 ArrayExpress GSM1227978 LE 1 Cy3 P-GSE54735-5 ArrayExpress GSM1227978 A-GEOD-10481 ArrayExpress array assay P-GSE54735-6 ArrayExpress P-GSE54735-1 ArrayExpress GSM1227978_sample_table.txt norm GSM1227978_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54735/E-GEOD-54735.processed.1.zip MCF10A not specified GSM1227978 2 MCF10A-shLSD1pool vs MCF10AControlpool MCF10A-shLSD1pool MCF10A-shLSD1pool vs MCF10AControlpool CK Lab MCF10A Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 ArrayExpress ArrayExpress P-GSE54735-3 ArrayExpress GSM1227978 extract 2 total RNA P-GSE54735-4 ArrayExpress GSM1227978 LE 2 Cy5 P-GSE54735-5 ArrayExpress GSM1227978 A-GEOD-10481 ArrayExpress array assay P-GSE54735-6 ArrayExpress P-GSE54735-1 ArrayExpress GSM1227978_sample_table.txt norm GSM1227978_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54735/E-GEOD-54735.processed.1.zip MCF10A not specified GSM1227977 1 HME636-shSlugpool vs 636-Controlpoola 636-Controlpool HME636-shSlugpool vs 636-Controlpoola CK Lab HMEC (Patient2) Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 ArrayExpress ArrayExpress P-GSE54735-3 ArrayExpress GSM1227977 extract 1 total RNA P-GSE54735-4 ArrayExpress GSM1227977 LE 1 Cy3 P-GSE54735-5 ArrayExpress GSM1227977 A-GEOD-10481 ArrayExpress array assay P-GSE54735-6 ArrayExpress P-GSE54735-1 ArrayExpress GSM1227977_sample_table.txt norm GSM1227977_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54735/E-GEOD-54735.processed.1.zip HMEC (Patient2) not specified GSM1227977 2 HME636-shSlugpool vs 636-Controlpoola HME636-shSlugpool HME636-shSlugpool vs 636-Controlpoola CK Lab HMEC (Patient2) Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 ArrayExpress ArrayExpress P-GSE54735-3 ArrayExpress GSM1227977 extract 2 total RNA P-GSE54735-4 ArrayExpress GSM1227977 LE 2 Cy5 P-GSE54735-5 ArrayExpress GSM1227977 A-GEOD-10481 ArrayExpress array assay P-GSE54735-6 ArrayExpress P-GSE54735-1 ArrayExpress GSM1227977_sample_table.txt norm GSM1227977_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54735/E-GEOD-54735.processed.1.zip HMEC (Patient2) not specified GSM1227976 2 HME636-shSlugpool vs 636-Controlpool2 HME636-shSlugpool HME636-shSlugpool vs 636-Controlpool2 CK Lab HMEC (Patient2) Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 ArrayExpress ArrayExpress P-GSE54735-3 ArrayExpress GSM1227976 extract 2 total RNA P-GSE54735-4 ArrayExpress GSM1227976 LE 2 Cy5 P-GSE54735-5 ArrayExpress GSM1227976 A-GEOD-10481 ArrayExpress array assay P-GSE54735-6 ArrayExpress P-GSE54735-1 ArrayExpress GSM1227976_sample_table.txt norm GSM1227976_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54735/E-GEOD-54735.processed.1.zip HMEC (Patient2) not specified GSM1227976 1 HME636-shSlugpool vs 636-Controlpool2 636-Controlpool HME636-shSlugpool vs 636-Controlpool2 CK Lab HMEC (Patient2) Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 ArrayExpress ArrayExpress P-GSE54735-3 ArrayExpress GSM1227976 extract 1 total RNA P-GSE54735-4 ArrayExpress GSM1227976 LE 1 Cy3 P-GSE54735-5 ArrayExpress GSM1227976 A-GEOD-10481 ArrayExpress array assay P-GSE54735-6 ArrayExpress P-GSE54735-1 ArrayExpress GSM1227976_sample_table.txt norm GSM1227976_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54735/E-GEOD-54735.processed.1.zip HMEC (Patient2) not specified GSM1227975 1 HME636-shSlugpool vs 636-Controlpool 636-Controlpool HME636-shSlugpool vs 636-Controlpool CK Lab HMEC (Patient2) Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 ArrayExpress ArrayExpress P-GSE54735-3 ArrayExpress GSM1227975 extract 1 total RNA P-GSE54735-4 ArrayExpress GSM1227975 LE 1 Cy3 P-GSE54735-5 ArrayExpress GSM1227975 A-GEOD-10481 ArrayExpress array assay P-GSE54735-6 ArrayExpress P-GSE54735-1 ArrayExpress GSM1227975_sample_table.txt norm GSM1227975_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54735/E-GEOD-54735.processed.1.zip HMEC (Patient2) not specified GSM1227975 2 HME636-shSlugpool vs 636-Controlpool HME636-shSlugpool HME636-shSlugpool vs 636-Controlpool CK Lab HMEC (Patient2) Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 ArrayExpress ArrayExpress P-GSE54735-3 ArrayExpress GSM1227975 extract 2 total RNA P-GSE54735-4 ArrayExpress GSM1227975 LE 2 Cy5 P-GSE54735-5 ArrayExpress GSM1227975 A-GEOD-10481 ArrayExpress array assay P-GSE54735-6 ArrayExpress P-GSE54735-1 ArrayExpress GSM1227975_sample_table.txt norm GSM1227975_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54735/E-GEOD-54735.processed.1.zip HMEC (Patient2) not specified GSM1227974 1 HME636-shLSD1pool vs 636-Controlpoola 636-Controlpool HME636-shLSD1pool vs 636-Controlpoola CK Lab HMEC (Patient2) Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 ArrayExpress ArrayExpress P-GSE54735-3 ArrayExpress GSM1227974 extract 1 total RNA P-GSE54735-4 ArrayExpress GSM1227974 LE 1 Cy3 P-GSE54735-5 ArrayExpress GSM1227974 A-GEOD-10481 ArrayExpress array assay P-GSE54735-6 ArrayExpress P-GSE54735-1 ArrayExpress GSM1227974_sample_table.txt norm GSM1227974_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54735/E-GEOD-54735.processed.1.zip HMEC (Patient2) not specified GSM1227974 2 HME636-shLSD1pool vs 636-Controlpoola HME636-shLSD1pool HME636-shLSD1pool vs 636-Controlpoola CK Lab HMEC (Patient2) Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 ArrayExpress ArrayExpress P-GSE54735-3 ArrayExpress GSM1227974 extract 2 total RNA P-GSE54735-4 ArrayExpress GSM1227974 LE 2 Cy5 P-GSE54735-5 ArrayExpress GSM1227974 A-GEOD-10481 ArrayExpress array assay P-GSE54735-6 ArrayExpress P-GSE54735-1 ArrayExpress GSM1227974_sample_table.txt norm GSM1227974_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54735/E-GEOD-54735.processed.1.zip HMEC (Patient2) not specified GSM1227973 1 HME636-shLSD1pool vs 636-Controlpool2 636-Controlpool HME636-shLSD1pool vs 636-Controlpool2 CK Lab HMEC (Patient2) Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 ArrayExpress ArrayExpress P-GSE54735-3 ArrayExpress GSM1227973 extract 1 total RNA P-GSE54735-4 ArrayExpress GSM1227973 LE 1 Cy3 P-GSE54735-5 ArrayExpress GSM1227973 A-GEOD-10481 ArrayExpress array assay P-GSE54735-6 ArrayExpress P-GSE54735-1 ArrayExpress GSM1227973_sample_table.txt norm GSM1227973_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54735/E-GEOD-54735.processed.1.zip HMEC (Patient2) not specified GSM1227973 2 HME636-shLSD1pool vs 636-Controlpool2 HME636-shLSD1pool HME636-shLSD1pool vs 636-Controlpool2 CK Lab HMEC (Patient2) Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 ArrayExpress ArrayExpress P-GSE54735-3 ArrayExpress GSM1227973 extract 2 total RNA P-GSE54735-4 ArrayExpress GSM1227973 LE 2 Cy5 P-GSE54735-5 ArrayExpress GSM1227973 A-GEOD-10481 ArrayExpress array assay P-GSE54735-6 ArrayExpress P-GSE54735-1 ArrayExpress GSM1227973_sample_table.txt norm GSM1227973_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54735/E-GEOD-54735.processed.1.zip HMEC (Patient2) not specified GSM1227972 2 HME636-shLSD1pool vs 636-Controlpool HME636-shLSD1pool HME636-shLSD1pool vs 636-Controlpool CK Lab HMEC (Patient2) Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 ArrayExpress ArrayExpress P-GSE54735-3 ArrayExpress GSM1227972 extract 2 total RNA P-GSE54735-4 ArrayExpress GSM1227972 LE 2 Cy5 P-GSE54735-5 ArrayExpress GSM1227972 A-GEOD-10481 ArrayExpress array assay P-GSE54735-6 ArrayExpress P-GSE54735-1 ArrayExpress GSM1227972_sample_table.txt norm GSM1227972_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54735/E-GEOD-54735.processed.1.zip HMEC (Patient2) not specified GSM1227972 1 HME636-shLSD1pool vs 636-Controlpool 636-Controlpool HME636-shLSD1pool vs 636-Controlpool CK Lab HMEC (Patient2) Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 ArrayExpress ArrayExpress P-GSE54735-3 ArrayExpress GSM1227972 extract 1 total RNA P-GSE54735-4 ArrayExpress GSM1227972 LE 1 Cy3 P-GSE54735-5 ArrayExpress GSM1227972 A-GEOD-10481 ArrayExpress array assay P-GSE54735-6 ArrayExpress P-GSE54735-1 ArrayExpress GSM1227972_sample_table.txt norm GSM1227972_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54735/E-GEOD-54735.processed.1.zip HMEC (Patient2) not specified GSM1227971 1 HME630-shSlugpool vs 630-Controlpoola 630-Controlpool HME630-shSlugpool vs 630-Controlpoola CK Lab HMEC (Patient1) Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 ArrayExpress ArrayExpress P-GSE54735-3 ArrayExpress GSM1227971 extract 1 total RNA P-GSE54735-4 ArrayExpress GSM1227971 LE 1 Cy3 P-GSE54735-5 ArrayExpress GSM1227971 A-GEOD-10481 ArrayExpress array assay P-GSE54735-6 ArrayExpress P-GSE54735-1 ArrayExpress GSM1227971_sample_table.txt norm GSM1227971_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54735/E-GEOD-54735.processed.1.zip HMEC (Patient1) not specified GSM1227971 2 HME630-shSlugpool vs 630-Controlpoola HME630-shSlugpool HME630-shSlugpool vs 630-Controlpoola CK Lab HMEC (Patient1) Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 ArrayExpress ArrayExpress P-GSE54735-3 ArrayExpress GSM1227971 extract 2 total RNA P-GSE54735-4 ArrayExpress GSM1227971 LE 2 Cy5 P-GSE54735-5 ArrayExpress GSM1227971 A-GEOD-10481 ArrayExpress array assay P-GSE54735-6 ArrayExpress P-GSE54735-1 ArrayExpress GSM1227971_sample_table.txt norm GSM1227971_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54735/E-GEOD-54735.processed.1.zip HMEC (Patient1) not specified GSM1227970 1 HME630-shSlugpool vs 630-Controlpool2 630-Controlpool HME630-shSlugpool vs 630-Controlpool2 CK Lab HMEC (Patient1) Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 ArrayExpress ArrayExpress P-GSE54735-3 ArrayExpress GSM1227970 extract 1 total RNA P-GSE54735-4 ArrayExpress GSM1227970 LE 1 Cy3 P-GSE54735-5 ArrayExpress GSM1227970 A-GEOD-10481 ArrayExpress array assay P-GSE54735-6 ArrayExpress P-GSE54735-1 ArrayExpress GSM1227970_sample_table.txt norm GSM1227970_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54735/E-GEOD-54735.processed.1.zip HMEC (Patient1) not specified GSM1227970 2 HME630-shSlugpool vs 630-Controlpool2 HME630-shSlugpool HME630-shSlugpool vs 630-Controlpool2 CK Lab HMEC (Patient1) Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 ArrayExpress ArrayExpress P-GSE54735-3 ArrayExpress GSM1227970 extract 2 total RNA P-GSE54735-4 ArrayExpress GSM1227970 LE 2 Cy5 P-GSE54735-5 ArrayExpress GSM1227970 A-GEOD-10481 ArrayExpress array assay P-GSE54735-6 ArrayExpress P-GSE54735-1 ArrayExpress GSM1227970_sample_table.txt norm GSM1227970_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54735/E-GEOD-54735.processed.1.zip HMEC (Patient1) not specified GSM1227969 1 HME630-shSlugpool vs 630-Controlpool 630-Controlpool HME630-shSlugpool vs 630-Controlpool CK Lab HMEC (Patient1) Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 ArrayExpress ArrayExpress P-GSE54735-3 ArrayExpress GSM1227969 extract 1 total RNA P-GSE54735-4 ArrayExpress GSM1227969 LE 1 Cy3 P-GSE54735-5 ArrayExpress GSM1227969 A-GEOD-10481 ArrayExpress array assay P-GSE54735-6 ArrayExpress P-GSE54735-1 ArrayExpress GSM1227969_sample_table.txt norm GSM1227969_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54735/E-GEOD-54735.processed.1.zip HMEC (Patient1) not specified GSM1227969 2 HME630-shSlugpool vs 630-Controlpool HME630-shSlugpool HME630-shSlugpool vs 630-Controlpool CK Lab HMEC (Patient1) Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 ArrayExpress ArrayExpress P-GSE54735-3 ArrayExpress GSM1227969 extract 2 total RNA P-GSE54735-4 ArrayExpress GSM1227969 LE 2 Cy5 P-GSE54735-5 ArrayExpress GSM1227969 A-GEOD-10481 ArrayExpress array assay P-GSE54735-6 ArrayExpress P-GSE54735-1 ArrayExpress GSM1227969_sample_table.txt norm GSM1227969_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54735/E-GEOD-54735.processed.1.zip HMEC (Patient1) not specified GSM1227968 2 HME630-shLSD1pool vs 630-Controlpoola HME630-shLSD1pool HME630-shLSD1pool vs 630-Controlpoola CK Lab HMEC (Patient1) Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 ArrayExpress ArrayExpress P-GSE54735-3 ArrayExpress GSM1227968 extract 2 total RNA P-GSE54735-4 ArrayExpress GSM1227968 LE 2 Cy5 P-GSE54735-5 ArrayExpress GSM1227968 A-GEOD-10481 ArrayExpress array assay P-GSE54735-6 ArrayExpress P-GSE54735-1 ArrayExpress GSM1227968_sample_table.txt norm GSM1227968_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54735/E-GEOD-54735.processed.1.zip HMEC (Patient1) not specified GSM1227968 1 HME630-shLSD1pool vs 630-Controlpoola 630-Controlpool HME630-shLSD1pool vs 630-Controlpoola CK Lab HMEC (Patient1) Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 ArrayExpress ArrayExpress P-GSE54735-3 ArrayExpress GSM1227968 extract 1 total RNA P-GSE54735-4 ArrayExpress GSM1227968 LE 1 Cy3 P-GSE54735-5 ArrayExpress GSM1227968 A-GEOD-10481 ArrayExpress array assay P-GSE54735-6 ArrayExpress P-GSE54735-1 ArrayExpress GSM1227968_sample_table.txt norm GSM1227968_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54735/E-GEOD-54735.processed.1.zip HMEC (Patient1) not specified GSM1227967 1 HME630-shLSD1pool vs 630-Controlpool2 630-Controlpool HME630-shLSD1pool vs 630-Controlpool2 CK Lab HMEC (Patient1) Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 ArrayExpress ArrayExpress P-GSE54735-3 ArrayExpress GSM1227967 extract 1 total RNA P-GSE54735-4 ArrayExpress GSM1227967 LE 1 Cy3 P-GSE54735-5 ArrayExpress GSM1227967 A-GEOD-10481 ArrayExpress array assay P-GSE54735-6 ArrayExpress P-GSE54735-1 ArrayExpress GSM1227967_sample_table.txt norm GSM1227967_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54735/E-GEOD-54735.processed.1.zip HMEC (Patient1) not specified GSM1227967 2 HME630-shLSD1pool vs 630-Controlpool2 HME630-shLSD1pool HME630-shLSD1pool vs 630-Controlpool2 CK Lab HMEC (Patient1) Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 ArrayExpress ArrayExpress P-GSE54735-3 ArrayExpress GSM1227967 extract 2 total RNA P-GSE54735-4 ArrayExpress GSM1227967 LE 2 Cy5 P-GSE54735-5 ArrayExpress GSM1227967 A-GEOD-10481 ArrayExpress array assay P-GSE54735-6 ArrayExpress P-GSE54735-1 ArrayExpress GSM1227967_sample_table.txt norm GSM1227967_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54735/E-GEOD-54735.processed.1.zip HMEC (Patient1) not specified GSM1227966 2 HME630-shLSD1pool vs 630-Controlpool HME630-shLSD1pool HME630-shLSD1pool vs 630-Controlpool CK Lab HMEC (Patient1) Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 ArrayExpress ArrayExpress P-GSE54735-3 ArrayExpress GSM1227966 extract 2 total RNA P-GSE54735-4 ArrayExpress GSM1227966 LE 2 Cy5 P-GSE54735-5 ArrayExpress GSM1227966 A-GEOD-10481 ArrayExpress array assay P-GSE54735-6 ArrayExpress P-GSE54735-1 ArrayExpress GSM1227966_sample_table.txt norm GSM1227966_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54735/E-GEOD-54735.processed.1.zip HMEC (Patient1) not specified GSM1227966 1 HME630-shLSD1pool vs 630-Controlpool 630-Controlpool HME630-shLSD1pool vs 630-Controlpool CK Lab HMEC (Patient1) Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 ArrayExpress ArrayExpress P-GSE54735-3 ArrayExpress GSM1227966 extract 1 total RNA P-GSE54735-4 ArrayExpress GSM1227966 LE 1 Cy3 P-GSE54735-5 ArrayExpress GSM1227966 A-GEOD-10481 ArrayExpress array assay P-GSE54735-6 ArrayExpress P-GSE54735-1 ArrayExpress GSM1227966_sample_table.txt norm GSM1227966_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54735/E-GEOD-54735.processed.1.zip HMEC (Patient1) not specified