Source Name	Comment [Sample_description]	Comment [Sample_source_name]	Comment [Sample_title]	Characteristics [cell type]	Characteristics [disease state]	Characteristics [organism]	Term Source REF	Term Accession Number	Protocol REF	Term Source REF	Protocol REF	Term Source REF	Protocol REF	Term Source REF	Extract Name	Material Type	Protocol REF	Term Source REF	Labeled Extract Name	Label	Protocol REF	Term Source REF	Assay Name	Array Design REF	Term Source REF	Technology Type	Protocol REF	Term Source REF	Array Data File	Comment [ArrayExpress FTP file]	Protocol REF	Term Source REF	Normalization Name	Derived Array Data File	Comment [Derived ArrayExpress FTP file]	FactorValue [TREATMENT]
GSM1289233 1	Gene expression data from primary MCL cells treated with a pan-PI3K inhibitor	Primary MCL cells treated with a pan-PI3K inhibitor	MCL cells_pan-PI3K inhibitor treated_biological rep2	Primary MCL cells	mantle cell lymphoma	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	P-GSE53309-2	ArrayExpress	P-GSE53309-3	ArrayExpress	P-GSE53309-4	ArrayExpress	GSM1289233 extract 1	total RNA	P-GSE53309-5	ArrayExpress	GSM1289233 LE 1	biotin	P-GSE53309-6	ArrayExpress	GSM1289233	A-GEOD-13667	ArrayExpress	array assay	P-GSE53309-7	ArrayExpress	GSM1289233_SAMPLE_8.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-53309/E-GEOD-53309.raw.1.zip	P-GSE53309-1	ArrayExpress	GSM1289233_sample_table.txt norm	GSM1289233_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-53309/E-GEOD-53309.processed.1.zip	treated with a pan-PI3K inhibitor
GSM1289232 1	Gene expression data from primary MCL cells treated with a dual PI3K/mTOR inhibitor	Primary MCL cells treated with a dual PI3K/mTOR inhibitor	MCL cells_dual PI3K/mTOR inhibitor treated_biological rep2	Primary MCL cells	mantle cell lymphoma	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	P-GSE53309-2	ArrayExpress	P-GSE53309-3	ArrayExpress	P-GSE53309-4	ArrayExpress	GSM1289232 extract 1	total RNA	P-GSE53309-5	ArrayExpress	GSM1289232 LE 1	biotin	P-GSE53309-6	ArrayExpress	GSM1289232	A-GEOD-13667	ArrayExpress	array assay	P-GSE53309-7	ArrayExpress	GSM1289232_SAMPLE_7.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-53309/E-GEOD-53309.raw.1.zip	P-GSE53309-1	ArrayExpress	GSM1289232_sample_table.txt norm	GSM1289232_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-53309/E-GEOD-53309.processed.1.zip	treated with a dual PI3K/mTOR inhibitor
GSM1289231 1	Gene expression data from primary MCL cells treated with a mTOR inhibitor	Primary MCL cells treated with a mTOR inhibitor	MCL cells_mTOR inhibitor treated_biological rep2	Primary MCL cells	mantle cell lymphoma	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	P-GSE53309-2	ArrayExpress	P-GSE53309-3	ArrayExpress	P-GSE53309-4	ArrayExpress	GSM1289231 extract 1	total RNA	P-GSE53309-5	ArrayExpress	GSM1289231 LE 1	biotin	P-GSE53309-6	ArrayExpress	GSM1289231	A-GEOD-13667	ArrayExpress	array assay	P-GSE53309-7	ArrayExpress	GSM1289231_SAMPLE_6.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-53309/E-GEOD-53309.raw.1.zip	P-GSE53309-1	ArrayExpress	GSM1289231_sample_table.txt norm	GSM1289231_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-53309/E-GEOD-53309.processed.1.zip	treated with a mTOR inhibitor
GSM1289230 1	Gene expression data from untreated primary MCL cells	Primary MCL cells untreated	MCL cells_untreated_ biological rep2	Primary MCL cells	mantle cell lymphoma	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	P-GSE53309-2	ArrayExpress	P-GSE53309-3	ArrayExpress	P-GSE53309-4	ArrayExpress	GSM1289230 extract 1	total RNA	P-GSE53309-5	ArrayExpress	GSM1289230 LE 1	biotin	P-GSE53309-6	ArrayExpress	GSM1289230	A-GEOD-13667	ArrayExpress	array assay	P-GSE53309-7	ArrayExpress	GSM1289230_SAMPLE_5.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-53309/E-GEOD-53309.raw.1.zip	P-GSE53309-1	ArrayExpress	GSM1289230_sample_table.txt norm	GSM1289230_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-53309/E-GEOD-53309.processed.1.zip	untreated
GSM1289229 1	Gene expression data from primary MCL cells treated with a pan-PI3K inhibitor	Primary MCL cells treated with a pan-PI3K inhibitor	MCL cells_pan-PI3K inhibitor treated_biological rep1	Primary MCL cells	mantle cell lymphoma	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	P-GSE53309-2	ArrayExpress	P-GSE53309-3	ArrayExpress	P-GSE53309-4	ArrayExpress	GSM1289229 extract 1	total RNA	P-GSE53309-5	ArrayExpress	GSM1289229 LE 1	biotin	P-GSE53309-6	ArrayExpress	GSM1289229	A-GEOD-13667	ArrayExpress	array assay	P-GSE53309-7	ArrayExpress	GSM1289229_SAMPLE_4.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-53309/E-GEOD-53309.raw.1.zip	P-GSE53309-1	ArrayExpress	GSM1289229_sample_table.txt norm	GSM1289229_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-53309/E-GEOD-53309.processed.1.zip	treated with a pan-PI3K inhibitor
GSM1289228 1	Gene expression data from primary MCL cells treated with a dual PI3K/mTOR inhibitor	Primary MCL cells treated with a dual PI3K/mTOR inhibitor	MCL cells_dual PI3K/mTOR inhibitor treated_biological rep1	Primary MCL cells	mantle cell lymphoma	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	P-GSE53309-2	ArrayExpress	P-GSE53309-3	ArrayExpress	P-GSE53309-4	ArrayExpress	GSM1289228 extract 1	total RNA	P-GSE53309-5	ArrayExpress	GSM1289228 LE 1	biotin	P-GSE53309-6	ArrayExpress	GSM1289228	A-GEOD-13667	ArrayExpress	array assay	P-GSE53309-7	ArrayExpress	GSM1289228_SAMPLE_3.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-53309/E-GEOD-53309.raw.1.zip	P-GSE53309-1	ArrayExpress	GSM1289228_sample_table.txt norm	GSM1289228_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-53309/E-GEOD-53309.processed.1.zip	treated with a dual PI3K/mTOR inhibitor
GSM1289227 1	Gene expression data from primary MCL cells treated with a mTOR inhibitor	Primary MCL cells treated with a mTOR inhibitor	MCL cells_mTOR inhibitor treated_biological rep1	Primary MCL cells	mantle cell lymphoma	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	P-GSE53309-2	ArrayExpress	P-GSE53309-3	ArrayExpress	P-GSE53309-4	ArrayExpress	GSM1289227 extract 1	total RNA	P-GSE53309-5	ArrayExpress	GSM1289227 LE 1	biotin	P-GSE53309-6	ArrayExpress	GSM1289227	A-GEOD-13667	ArrayExpress	array assay	P-GSE53309-7	ArrayExpress	GSM1289227_SAMPLE_2.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-53309/E-GEOD-53309.raw.1.zip	P-GSE53309-1	ArrayExpress	GSM1289227_sample_table.txt norm	GSM1289227_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-53309/E-GEOD-53309.processed.1.zip	treated with a mTOR inhibitor
GSM1289226 1	Gene expression data from untreated primary MCL cells	Primary MCL cells untreated	MCL cells_untreated_ biological rep1	Primary MCL cells	mantle cell lymphoma	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	P-GSE53309-2	ArrayExpress	P-GSE53309-3	ArrayExpress	P-GSE53309-4	ArrayExpress	GSM1289226 extract 1	total RNA	P-GSE53309-5	ArrayExpress	GSM1289226 LE 1	biotin	P-GSE53309-6	ArrayExpress	GSM1289226	A-GEOD-13667	ArrayExpress	array assay	P-GSE53309-7	ArrayExpress	GSM1289226_SAMPLE_1.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-53309/E-GEOD-53309.raw.1.zip	P-GSE53309-1	ArrayExpress	GSM1289226_sample_table.txt norm	GSM1289226_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-53309/E-GEOD-53309.processed.1.zip	untreated