Source Name Comment [Sample_description] Comment [Sample_source_name] Comment [Sample_title] Characteristics [cultivar] Characteristics [infestation] Characteristics [organism] Term Source REF Term Accession Number Characteristics [organism part] Term Source REF Term Accession Number Protocol REF Term Source REF Protocol REF Term Source REF Protocol REF Term Source REF Extract Name Material Type Protocol REF Term Source REF Labeled Extract Name Label Protocol REF Term Source REF Assay Name Array Design REF Term Source REF Technology Type Protocol REF Term Source REF Array Data File Comment [ArrayExpress FTP file] Protocol REF Term Source REF Normalization Name Derived Array Data File Comment [Derived ArrayExpress FTP file] FactorValue [ORGANISM PART] Term Source REF Term Accession Number FactorValue [TREATMENT] Term Source REF Term Accession Number GSM1273703 1 Whitefly infested pepper root root Root_CW Bukwang whitefly Capsicum annuum EFO http://purl.obolibrary.org/obo/NCBITaxon_4072 root EFO EFO_0000989 P-GSE52661-2 ArrayExpress P-GSE52661-3 ArrayExpress P-GSE52661-4 ArrayExpress GSM1273703 extract 1 total RNA P-GSE52661-5 ArrayExpress GSM1273703 LE 1 Cy3 P-GSE52661-6 ArrayExpress GSM1273703 A-GEOD-17972 ArrayExpress array assay P-GSE52661-7 ArrayExpress GSM1273703_Root_CW_532_nm_norm_RMA.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-52661/E-GEOD-52661.raw.1.zip P-GSE52661-1 ArrayExpress GSM1273703_sample_table.txt norm GSM1273703_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-52661/E-GEOD-52661.processed.1.zip root EFO EFO_0000989 not specified GSM1273703 1 Whitefly infested pepper root root Root_CW Bukwang whitefly Capsicum annuum EFO http://purl.obolibrary.org/obo/NCBITaxon_4072 root EFO EFO_0000989 P-GSE52661-2 ArrayExpress P-GSE52661-3 ArrayExpress P-GSE52661-4 ArrayExpress GSM1273703 extract 1 total RNA P-GSE52661-5 ArrayExpress GSM1273703 LE 1 Cy3 P-GSE52661-6 ArrayExpress GSM1273703 A-GEOD-17972 ArrayExpress array assay P-GSE52661-7 ArrayExpress GSM1273703_Root_CW_061808_532.probe.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-52661/E-GEOD-52661.raw.1.zip P-GSE52661-1 ArrayExpress GSM1273703_sample_table.txt norm GSM1273703_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-52661/E-GEOD-52661.processed.1.zip root EFO EFO_0000989 not specified GSM1273702 1 BTH + whitefly treated pepper root root Root_WB Bukwang whitefly Capsicum annuum EFO http://purl.obolibrary.org/obo/NCBITaxon_4072 root EFO EFO_0000989 P-GSE52661-2 ArrayExpress P-GSE52661-3 ArrayExpress P-GSE52661-4 ArrayExpress GSM1273702 extract 1 total RNA P-GSE52661-5 ArrayExpress GSM1273702 LE 1 Cy3 P-GSE52661-6 ArrayExpress GSM1273702 A-GEOD-17972 ArrayExpress array assay P-GSE52661-7 ArrayExpress GSM1273702_Root_WB_532_nm_norm_RMA.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-52661/E-GEOD-52661.raw.1.zip P-GSE52661-1 ArrayExpress GSM1273702_sample_table.txt norm GSM1273702_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-52661/E-GEOD-52661.processed.1.zip root EFO EFO_0000989 BTH GSM1273702 1 BTH + whitefly treated pepper root root Root_WB Bukwang whitefly Capsicum annuum EFO http://purl.obolibrary.org/obo/NCBITaxon_4072 root EFO EFO_0000989 P-GSE52661-2 ArrayExpress P-GSE52661-3 ArrayExpress P-GSE52661-4 ArrayExpress GSM1273702 extract 1 total RNA P-GSE52661-5 ArrayExpress GSM1273702 LE 1 Cy3 P-GSE52661-6 ArrayExpress GSM1273702 A-GEOD-17972 ArrayExpress array assay P-GSE52661-7 ArrayExpress GSM1273702_Root_WB_061808_532.probe.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-52661/E-GEOD-52661.raw.1.zip P-GSE52661-1 ArrayExpress GSM1273702_sample_table.txt norm GSM1273702_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-52661/E-GEOD-52661.processed.1.zip root EFO EFO_0000989 BTH GSM1273701 1 BTH treated pepper root root Root_B Bukwang Capsicum annuum EFO http://purl.obolibrary.org/obo/NCBITaxon_4072 root EFO EFO_0000989 P-GSE52661-2 ArrayExpress P-GSE52661-3 ArrayExpress P-GSE52661-4 ArrayExpress GSM1273701 extract 1 total RNA P-GSE52661-5 ArrayExpress GSM1273701 LE 1 Cy3 P-GSE52661-6 ArrayExpress GSM1273701 A-GEOD-17972 ArrayExpress array assay P-GSE52661-7 ArrayExpress GSM1273701_Root_B_532_nm_norm_RMA.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-52661/E-GEOD-52661.raw.1.zip P-GSE52661-1 ArrayExpress GSM1273701_sample_table.txt norm GSM1273701_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-52661/E-GEOD-52661.processed.1.zip root EFO EFO_0000989 BTH GSM1273701 1 BTH treated pepper root root Root_B Bukwang Capsicum annuum EFO http://purl.obolibrary.org/obo/NCBITaxon_4072 root EFO EFO_0000989 P-GSE52661-2 ArrayExpress P-GSE52661-3 ArrayExpress P-GSE52661-4 ArrayExpress GSM1273701 extract 1 total RNA P-GSE52661-5 ArrayExpress GSM1273701 LE 1 Cy3 P-GSE52661-6 ArrayExpress GSM1273701 A-GEOD-17972 ArrayExpress array assay P-GSE52661-7 ArrayExpress GSM1273701_Root_B_061608_532.probe.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-52661/E-GEOD-52661.raw.1.zip P-GSE52661-1 ArrayExpress GSM1273701_sample_table.txt norm GSM1273701_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-52661/E-GEOD-52661.processed.1.zip root EFO EFO_0000989 BTH GSM1273700 1 water control treated pepper root root Root_C Bukwang Capsicum annuum EFO http://purl.obolibrary.org/obo/NCBITaxon_4072 root EFO EFO_0000989 P-GSE52661-2 ArrayExpress P-GSE52661-3 ArrayExpress P-GSE52661-4 ArrayExpress GSM1273700 extract 1 total RNA P-GSE52661-5 ArrayExpress GSM1273700 LE 1 Cy3 P-GSE52661-6 ArrayExpress GSM1273700 A-GEOD-17972 ArrayExpress array assay P-GSE52661-7 ArrayExpress GSM1273700_Root_C_532_nm_norm_RMA.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-52661/E-GEOD-52661.raw.1.zip P-GSE52661-1 ArrayExpress GSM1273700_sample_table.txt norm GSM1273700_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-52661/E-GEOD-52661.processed.1.zip root EFO EFO_0000989 water EFO http://purl.obolibrary.org/obo/CHEBI_15377 GSM1273700 1 water control treated pepper root root Root_C Bukwang Capsicum annuum EFO http://purl.obolibrary.org/obo/NCBITaxon_4072 root EFO EFO_0000989 P-GSE52661-2 ArrayExpress P-GSE52661-3 ArrayExpress P-GSE52661-4 ArrayExpress GSM1273700 extract 1 total RNA P-GSE52661-5 ArrayExpress GSM1273700 LE 1 Cy3 P-GSE52661-6 ArrayExpress GSM1273700 A-GEOD-17972 ArrayExpress array assay P-GSE52661-7 ArrayExpress GSM1273700_Root_C_071508_532.probe.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-52661/E-GEOD-52661.raw.1.zip P-GSE52661-1 ArrayExpress GSM1273700_sample_table.txt norm GSM1273700_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-52661/E-GEOD-52661.processed.1.zip root EFO EFO_0000989 water EFO http://purl.obolibrary.org/obo/CHEBI_15377 GSM1273699 1 Whitefly infested pepper leaf leaf leaf1 Bukwang whitefly Capsicum annuum EFO http://purl.obolibrary.org/obo/NCBITaxon_4072 leaf EFO EFO_0000993 P-GSE52661-2 ArrayExpress P-GSE52661-3 ArrayExpress P-GSE52661-4 ArrayExpress GSM1273699 extract 1 total RNA P-GSE52661-5 ArrayExpress GSM1273699 LE 1 Cy3 P-GSE52661-6 ArrayExpress GSM1273699 A-GEOD-17972 ArrayExpress array assay P-GSE52661-7 ArrayExpress GSM1273699_Leaf1_532_nm_norm_RMA.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-52661/E-GEOD-52661.raw.1.zip P-GSE52661-1 ArrayExpress GSM1273699_sample_table.txt norm GSM1273699_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-52661/E-GEOD-52661.processed.1.zip leaf EFO EFO_0000993 not specified GSM1273699 1 Whitefly infested pepper leaf leaf leaf1 Bukwang whitefly Capsicum annuum EFO http://purl.obolibrary.org/obo/NCBITaxon_4072 leaf EFO EFO_0000993 P-GSE52661-2 ArrayExpress P-GSE52661-3 ArrayExpress P-GSE52661-4 ArrayExpress GSM1273699 extract 1 total RNA P-GSE52661-5 ArrayExpress GSM1273699 LE 1 Cy3 P-GSE52661-6 ArrayExpress GSM1273699 A-GEOD-17972 ArrayExpress array assay P-GSE52661-7 ArrayExpress GSM1273699_Leaf1_061308_532.probe.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-52661/E-GEOD-52661.raw.1.zip P-GSE52661-1 ArrayExpress GSM1273699_sample_table.txt norm GSM1273699_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-52661/E-GEOD-52661.processed.1.zip leaf EFO EFO_0000993 not specified GSM1273698 1 BTH + whitefly treated pepper leaf leaf leaf4 Bukwang whitefly Capsicum annuum EFO http://purl.obolibrary.org/obo/NCBITaxon_4072 leaf EFO EFO_0000993 P-GSE52661-2 ArrayExpress P-GSE52661-3 ArrayExpress P-GSE52661-4 ArrayExpress GSM1273698 extract 1 total RNA P-GSE52661-5 ArrayExpress GSM1273698 LE 1 Cy3 P-GSE52661-6 ArrayExpress GSM1273698 A-GEOD-17972 ArrayExpress array assay P-GSE52661-7 ArrayExpress GSM1273698_Leaf4_532_nm_norm_RMA.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-52661/E-GEOD-52661.raw.1.zip P-GSE52661-1 ArrayExpress GSM1273698_sample_table.txt norm GSM1273698_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-52661/E-GEOD-52661.processed.1.zip leaf EFO EFO_0000993 BTH GSM1273698 1 BTH + whitefly treated pepper leaf leaf leaf4 Bukwang whitefly Capsicum annuum EFO http://purl.obolibrary.org/obo/NCBITaxon_4072 leaf EFO EFO_0000993 P-GSE52661-2 ArrayExpress P-GSE52661-3 ArrayExpress P-GSE52661-4 ArrayExpress GSM1273698 extract 1 total RNA P-GSE52661-5 ArrayExpress GSM1273698 LE 1 Cy3 P-GSE52661-6 ArrayExpress GSM1273698 A-GEOD-17972 ArrayExpress array assay P-GSE52661-7 ArrayExpress GSM1273698_Leaf4_061708_532.probe.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-52661/E-GEOD-52661.raw.1.zip P-GSE52661-1 ArrayExpress GSM1273698_sample_table.txt norm GSM1273698_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-52661/E-GEOD-52661.processed.1.zip leaf EFO EFO_0000993 BTH GSM1273697 1 BTH treated pepper leaf leaf leaf3 Bukwang Capsicum annuum EFO http://purl.obolibrary.org/obo/NCBITaxon_4072 leaf EFO EFO_0000993 P-GSE52661-2 ArrayExpress P-GSE52661-3 ArrayExpress P-GSE52661-4 ArrayExpress GSM1273697 extract 1 total RNA P-GSE52661-5 ArrayExpress GSM1273697 LE 1 Cy3 P-GSE52661-6 ArrayExpress GSM1273697 A-GEOD-17972 ArrayExpress array assay P-GSE52661-7 ArrayExpress GSM1273697_Leaf3_532_nm_norm_RMA.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-52661/E-GEOD-52661.raw.1.zip P-GSE52661-1 ArrayExpress GSM1273697_sample_table.txt norm GSM1273697_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-52661/E-GEOD-52661.processed.1.zip leaf EFO EFO_0000993 BTH GSM1273697 1 BTH treated pepper leaf leaf leaf3 Bukwang Capsicum annuum EFO http://purl.obolibrary.org/obo/NCBITaxon_4072 leaf EFO EFO_0000993 P-GSE52661-2 ArrayExpress P-GSE52661-3 ArrayExpress P-GSE52661-4 ArrayExpress GSM1273697 extract 1 total RNA P-GSE52661-5 ArrayExpress GSM1273697 LE 1 Cy3 P-GSE52661-6 ArrayExpress GSM1273697 A-GEOD-17972 ArrayExpress array assay P-GSE52661-7 ArrayExpress GSM1273697_Leaf3_061708_532.probe.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-52661/E-GEOD-52661.raw.1.zip P-GSE52661-1 ArrayExpress GSM1273697_sample_table.txt norm GSM1273697_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-52661/E-GEOD-52661.processed.1.zip leaf EFO EFO_0000993 BTH GSM1273696 1 water control treated pepper leaf leaf leaf2 Bukwang Capsicum annuum EFO http://purl.obolibrary.org/obo/NCBITaxon_4072 leaf EFO EFO_0000993 P-GSE52661-2 ArrayExpress P-GSE52661-3 ArrayExpress P-GSE52661-4 ArrayExpress GSM1273696 extract 1 total RNA P-GSE52661-5 ArrayExpress GSM1273696 LE 1 Cy3 P-GSE52661-6 ArrayExpress GSM1273696 A-GEOD-17972 ArrayExpress array assay P-GSE52661-7 ArrayExpress GSM1273696_Leaf2_532_nm_norm_RMA.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-52661/E-GEOD-52661.raw.1.zip P-GSE52661-1 ArrayExpress GSM1273696_sample_table.txt norm GSM1273696_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-52661/E-GEOD-52661.processed.1.zip leaf EFO EFO_0000993 water EFO http://purl.obolibrary.org/obo/CHEBI_15377 GSM1273696 1 water control treated pepper leaf leaf leaf2 Bukwang Capsicum annuum EFO http://purl.obolibrary.org/obo/NCBITaxon_4072 leaf EFO EFO_0000993 P-GSE52661-2 ArrayExpress P-GSE52661-3 ArrayExpress P-GSE52661-4 ArrayExpress GSM1273696 extract 1 total RNA P-GSE52661-5 ArrayExpress GSM1273696 LE 1 Cy3 P-GSE52661-6 ArrayExpress GSM1273696 A-GEOD-17972 ArrayExpress array assay P-GSE52661-7 ArrayExpress GSM1273696_Leaf2_061308_532.probe.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-52661/E-GEOD-52661.raw.1.zip P-GSE52661-1 ArrayExpress GSM1273696_sample_table.txt norm GSM1273696_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-52661/E-GEOD-52661.processed.1.zip leaf EFO EFO_0000993 water EFO http://purl.obolibrary.org/obo/CHEBI_15377