Source Name Comment [Sample_source_name] Comment [Sample_title] Characteristics [disease] Term Source REF Term Accession Number Characteristics [organism] Term Source REF Term Accession Number Protocol REF Term Source REF Extract Name Material Type Protocol REF Term Source REF Labeled Extract Name Label Protocol REF Term Source REF Assay Name Array Design REF Term Source REF Technology Type Protocol REF Term Source REF Array Data File Comment [ArrayExpress FTP file] Protocol REF Term Source REF Normalization Name Derived Array Data File Comment [Derived ArrayExpress FTP file] FactorValue [DISEASE] Term Source REF Term Accession Number GSM1233531 1 primary human: lymphoma tissue biopsy or FNA; flow-sorted tumor, determined by kappa:lambda ratio ML093T_kappa Tumor EFO EFO_0000616 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE50973-2 ArrayExpress GSM1233531 extract 1 genomic DNA P-GSE50973-3 ArrayExpress GSM1233531 LE 1 biotin P-GSE50973-4 ArrayExpress GSM1233531 A-AFFY-142 ArrayExpress array assay P-GSE50973-5 ArrayExpress GSM1233531_Malek_ML093-T.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.raw.1.zip P-GSE50973-1 ArrayExpress GSM1233531_sample_table.txt norm GSM1233531_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.processed.1.zip Tumor EFO EFO_0000616 GSM1233531 1 primary human: lymphoma tissue biopsy or FNA; flow-sorted tumor, determined by kappa:lambda ratio ML093T_kappa Tumor EFO EFO_0000616 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE50973-2 ArrayExpress GSM1233531 extract 1 genomic DNA P-GSE50973-3 ArrayExpress GSM1233531 LE 1 biotin P-GSE50973-4 ArrayExpress GSM1233531 A-AFFY-142 ArrayExpress array assay P-GSE50973-5 ArrayExpress GSM1233531_Malek_012_ML93-k-T_GenomeWideSNP_6_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.raw.1.zip P-GSE50973-1 ArrayExpress GSM1233531_sample_table.txt norm GSM1233531_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.processed.1.zip Tumor EFO EFO_0000616 GSM1233530 1 primary human: lymphoma tissue biopsy or FNA; flow-sorted CD3+ cells ML093N_CD3 normal EFO EFO_0000761 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE50973-2 ArrayExpress GSM1233530 extract 1 genomic DNA P-GSE50973-3 ArrayExpress GSM1233530 LE 1 biotin P-GSE50973-4 ArrayExpress GSM1233530 A-AFFY-142 ArrayExpress array assay P-GSE50973-5 ArrayExpress GSM1233530_Malek_ML093-N.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.raw.1.zip P-GSE50973-1 ArrayExpress GSM1233530_sample_table.txt norm GSM1233530_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.processed.1.zip normal EFO EFO_0000761 GSM1233530 1 primary human: lymphoma tissue biopsy or FNA; flow-sorted CD3+ cells ML093N_CD3 normal EFO EFO_0000761 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE50973-2 ArrayExpress GSM1233530 extract 1 genomic DNA P-GSE50973-3 ArrayExpress GSM1233530 LE 1 biotin P-GSE50973-4 ArrayExpress GSM1233530 A-AFFY-142 ArrayExpress array assay P-GSE50973-5 ArrayExpress GSM1233530_Malek_024_ML93-CD3-N_GenomeWideSNP_6_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.raw.1.zip P-GSE50973-1 ArrayExpress GSM1233530_sample_table.txt norm GSM1233530_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.processed.1.zip normal EFO EFO_0000761 GSM1233529 1 primary human: lymphoma tissue biopsy or FNA; flow-sorted tumor, determined by kappa:lambda ratio ML090T_lambda Tumor EFO EFO_0000616 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE50973-2 ArrayExpress GSM1233529 extract 1 genomic DNA P-GSE50973-3 ArrayExpress GSM1233529 LE 1 biotin P-GSE50973-4 ArrayExpress GSM1233529 A-AFFY-142 ArrayExpress array assay P-GSE50973-5 ArrayExpress GSM1233529_Malek_ML090-T.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.raw.1.zip P-GSE50973-1 ArrayExpress GSM1233529_sample_table.txt norm GSM1233529_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.processed.1.zip Tumor EFO EFO_0000616 GSM1233529 1 primary human: lymphoma tissue biopsy or FNA; flow-sorted tumor, determined by kappa:lambda ratio ML090T_lambda Tumor EFO EFO_0000616 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE50973-2 ArrayExpress GSM1233529 extract 1 genomic DNA P-GSE50973-3 ArrayExpress GSM1233529 LE 1 biotin P-GSE50973-4 ArrayExpress GSM1233529 A-AFFY-142 ArrayExpress array assay P-GSE50973-5 ArrayExpress GSM1233529_Malek_011_ML90-L-T_GenomeWideSNP_6_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.raw.1.zip P-GSE50973-1 ArrayExpress GSM1233529_sample_table.txt norm GSM1233529_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.processed.1.zip Tumor EFO EFO_0000616 GSM1233528 1 primary human: lymphoma tissue biopsy or FNA; flow-sorted CD3+ cells ML090N_CD3 normal EFO EFO_0000761 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE50973-2 ArrayExpress GSM1233528 extract 1 genomic DNA P-GSE50973-3 ArrayExpress GSM1233528 LE 1 biotin P-GSE50973-4 ArrayExpress GSM1233528 A-AFFY-142 ArrayExpress array assay P-GSE50973-5 ArrayExpress GSM1233528_Malek_ML090-N.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.raw.1.zip P-GSE50973-1 ArrayExpress GSM1233528_sample_table.txt norm GSM1233528_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.processed.1.zip normal EFO EFO_0000761 GSM1233528 1 primary human: lymphoma tissue biopsy or FNA; flow-sorted CD3+ cells ML090N_CD3 normal EFO EFO_0000761 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE50973-2 ArrayExpress GSM1233528 extract 1 genomic DNA P-GSE50973-3 ArrayExpress GSM1233528 LE 1 biotin P-GSE50973-4 ArrayExpress GSM1233528 A-AFFY-142 ArrayExpress array assay P-GSE50973-5 ArrayExpress GSM1233528_Malek_023_ML90-CD3-N_GenomeWideSNP_6_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.raw.1.zip P-GSE50973-1 ArrayExpress GSM1233528_sample_table.txt norm GSM1233528_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.processed.1.zip normal EFO EFO_0000761 GSM1233527 1 primary human: lymphoma tissue biopsy or FNA; flow-sorted tumor, determined by kappa:lambda ratio ML087T_kappa Tumor EFO EFO_0000616 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE50973-2 ArrayExpress GSM1233527 extract 1 genomic DNA P-GSE50973-3 ArrayExpress GSM1233527 LE 1 biotin P-GSE50973-4 ArrayExpress GSM1233527 A-AFFY-142 ArrayExpress array assay P-GSE50973-5 ArrayExpress GSM1233527_Malek_ML087-T.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.raw.1.zip P-GSE50973-1 ArrayExpress GSM1233527_sample_table.txt norm GSM1233527_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.processed.1.zip Tumor EFO EFO_0000616 GSM1233527 1 primary human: lymphoma tissue biopsy or FNA; flow-sorted tumor, determined by kappa:lambda ratio ML087T_kappa Tumor EFO EFO_0000616 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE50973-2 ArrayExpress GSM1233527 extract 1 genomic DNA P-GSE50973-3 ArrayExpress GSM1233527 LE 1 biotin P-GSE50973-4 ArrayExpress GSM1233527 A-AFFY-142 ArrayExpress array assay P-GSE50973-5 ArrayExpress GSM1233527_Malek_010_ML87-k-T_GenomeWideSNP_6_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.raw.1.zip P-GSE50973-1 ArrayExpress GSM1233527_sample_table.txt norm GSM1233527_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.processed.1.zip Tumor EFO EFO_0000616 GSM1233526 1 primary human: lymphoma tissue biopsy or FNA; flow-sorted CD3+ cells ML087N_CD3 normal EFO EFO_0000761 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE50973-2 ArrayExpress GSM1233526 extract 1 genomic DNA P-GSE50973-3 ArrayExpress GSM1233526 LE 1 biotin P-GSE50973-4 ArrayExpress GSM1233526 A-AFFY-142 ArrayExpress array assay P-GSE50973-5 ArrayExpress GSM1233526_Malek_ML087-N.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.raw.1.zip P-GSE50973-1 ArrayExpress GSM1233526_sample_table.txt norm GSM1233526_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.processed.1.zip normal EFO EFO_0000761 GSM1233526 1 primary human: lymphoma tissue biopsy or FNA; flow-sorted CD3+ cells ML087N_CD3 normal EFO EFO_0000761 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE50973-2 ArrayExpress GSM1233526 extract 1 genomic DNA P-GSE50973-3 ArrayExpress GSM1233526 LE 1 biotin P-GSE50973-4 ArrayExpress GSM1233526 A-AFFY-142 ArrayExpress array assay P-GSE50973-5 ArrayExpress GSM1233526_Malek_022_ML87-CD3-N_GenomeWideSNP_6_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.raw.1.zip P-GSE50973-1 ArrayExpress GSM1233526_sample_table.txt norm GSM1233526_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.processed.1.zip normal EFO EFO_0000761 GSM1233525 1 primary human: lymphoma tissue biopsy or FNA; flow-sorted tumor, determined by kappa:lambda ratio ML079T_lambda Tumor EFO EFO_0000616 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE50973-2 ArrayExpress GSM1233525 extract 1 genomic DNA P-GSE50973-3 ArrayExpress GSM1233525 LE 1 biotin P-GSE50973-4 ArrayExpress GSM1233525 A-AFFY-142 ArrayExpress array assay P-GSE50973-5 ArrayExpress GSM1233525_Malek_ML079-T.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.raw.1.zip P-GSE50973-1 ArrayExpress GSM1233525_sample_table.txt norm GSM1233525_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.processed.1.zip Tumor EFO EFO_0000616 GSM1233525 1 primary human: lymphoma tissue biopsy or FNA; flow-sorted tumor, determined by kappa:lambda ratio ML079T_lambda Tumor EFO EFO_0000616 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE50973-2 ArrayExpress GSM1233525 extract 1 genomic DNA P-GSE50973-3 ArrayExpress GSM1233525 LE 1 biotin P-GSE50973-4 ArrayExpress GSM1233525 A-AFFY-142 ArrayExpress array assay P-GSE50973-5 ArrayExpress GSM1233525_Malek_009_ML79-L-T_GenomeWideSNP_6_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.raw.2.zip P-GSE50973-1 ArrayExpress GSM1233525_sample_table.txt norm GSM1233525_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.processed.1.zip Tumor EFO EFO_0000616 GSM1233524 1 primary human: lymphoma tissue biopsy or FNA; flow-sorted CD3+ cells ML079N_CD3 normal EFO EFO_0000761 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE50973-2 ArrayExpress GSM1233524 extract 1 genomic DNA P-GSE50973-3 ArrayExpress GSM1233524 LE 1 biotin P-GSE50973-4 ArrayExpress GSM1233524 A-AFFY-142 ArrayExpress array assay P-GSE50973-5 ArrayExpress GSM1233524_Malek_ML079-N.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.raw.2.zip P-GSE50973-1 ArrayExpress GSM1233524_sample_table.txt norm GSM1233524_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.processed.1.zip normal EFO EFO_0000761 GSM1233524 1 primary human: lymphoma tissue biopsy or FNA; flow-sorted CD3+ cells ML079N_CD3 normal EFO EFO_0000761 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE50973-2 ArrayExpress GSM1233524 extract 1 genomic DNA P-GSE50973-3 ArrayExpress GSM1233524 LE 1 biotin P-GSE50973-4 ArrayExpress GSM1233524 A-AFFY-142 ArrayExpress array assay P-GSE50973-5 ArrayExpress GSM1233524_Malek_021_ML79-CD3-N_GenomeWideSNP_6_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.raw.2.zip P-GSE50973-1 ArrayExpress GSM1233524_sample_table.txt norm GSM1233524_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.processed.1.zip normal EFO EFO_0000761 GSM1233523 1 primary human: lymphoma tissue biopsy or FNA; flow-sorted tumor, determined by kappa:lambda ratio ML066T_CD19 Tumor EFO EFO_0000616 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE50973-2 ArrayExpress GSM1233523 extract 1 genomic DNA P-GSE50973-3 ArrayExpress GSM1233523 LE 1 biotin P-GSE50973-4 ArrayExpress GSM1233523 A-AFFY-142 ArrayExpress array assay P-GSE50973-5 ArrayExpress GSM1233523_Malek_ML066-T.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.raw.2.zip P-GSE50973-1 ArrayExpress GSM1233523_sample_table.txt norm GSM1233523_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.processed.1.zip Tumor EFO EFO_0000616 GSM1233523 1 primary human: lymphoma tissue biopsy or FNA; flow-sorted tumor, determined by kappa:lambda ratio ML066T_CD19 Tumor EFO EFO_0000616 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE50973-2 ArrayExpress GSM1233523 extract 1 genomic DNA P-GSE50973-3 ArrayExpress GSM1233523 LE 1 biotin P-GSE50973-4 ArrayExpress GSM1233523 A-AFFY-142 ArrayExpress array assay P-GSE50973-5 ArrayExpress GSM1233523_Malek_008_ML66-CD19-T_GenomeWideSNP_6_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.raw.2.zip P-GSE50973-1 ArrayExpress GSM1233523_sample_table.txt norm GSM1233523_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.processed.1.zip Tumor EFO EFO_0000616 GSM1233522 1 primary human: lymphoma tissue biopsy or FNA; flow-sorted CD3+ cells ML066N_CD3 normal EFO EFO_0000761 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE50973-2 ArrayExpress GSM1233522 extract 1 genomic DNA P-GSE50973-3 ArrayExpress GSM1233522 LE 1 biotin P-GSE50973-4 ArrayExpress GSM1233522 A-AFFY-142 ArrayExpress array assay P-GSE50973-5 ArrayExpress GSM1233522_Malek_ML066-N.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.raw.2.zip P-GSE50973-1 ArrayExpress GSM1233522_sample_table.txt norm GSM1233522_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.processed.1.zip normal EFO EFO_0000761 GSM1233522 1 primary human: lymphoma tissue biopsy or FNA; flow-sorted CD3+ cells ML066N_CD3 normal EFO EFO_0000761 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE50973-2 ArrayExpress GSM1233522 extract 1 genomic DNA P-GSE50973-3 ArrayExpress GSM1233522 LE 1 biotin P-GSE50973-4 ArrayExpress GSM1233522 A-AFFY-142 ArrayExpress array assay P-GSE50973-5 ArrayExpress GSM1233522_Malek_020_ML66-CD3-N_GenomeWideSNP_6_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.raw.2.zip P-GSE50973-1 ArrayExpress GSM1233522_sample_table.txt norm GSM1233522_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.processed.1.zip normal EFO EFO_0000761 GSM1233521 1 primary human: lymphoma tissue biopsy or FNA; flow-sorted tumor, determined by kappa:lambda ratio ML055T_lambda Tumor EFO EFO_0000616 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE50973-2 ArrayExpress GSM1233521 extract 1 genomic DNA P-GSE50973-3 ArrayExpress GSM1233521 LE 1 biotin P-GSE50973-4 ArrayExpress GSM1233521 A-AFFY-142 ArrayExpress array assay P-GSE50973-5 ArrayExpress GSM1233521_Malek_ML055-T.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.raw.2.zip P-GSE50973-1 ArrayExpress GSM1233521_sample_table.txt norm GSM1233521_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.processed.1.zip Tumor EFO EFO_0000616 GSM1233521 1 primary human: lymphoma tissue biopsy or FNA; flow-sorted tumor, determined by kappa:lambda ratio ML055T_lambda Tumor EFO EFO_0000616 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE50973-2 ArrayExpress GSM1233521 extract 1 genomic DNA P-GSE50973-3 ArrayExpress GSM1233521 LE 1 biotin P-GSE50973-4 ArrayExpress GSM1233521 A-AFFY-142 ArrayExpress array assay P-GSE50973-5 ArrayExpress GSM1233521_Malek_007_ML55-L-T_GenomeWideSNP_6_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.raw.2.zip P-GSE50973-1 ArrayExpress GSM1233521_sample_table.txt norm GSM1233521_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.processed.1.zip Tumor EFO EFO_0000616 GSM1233520 1 primary human: lymphoma tissue biopsy or FNA; flow-sorted CD3+ cells ML055N_CD3 normal EFO EFO_0000761 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE50973-2 ArrayExpress GSM1233520 extract 1 genomic DNA P-GSE50973-3 ArrayExpress GSM1233520 LE 1 biotin P-GSE50973-4 ArrayExpress GSM1233520 A-AFFY-142 ArrayExpress array assay P-GSE50973-5 ArrayExpress GSM1233520_Malek_ML055-N.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.raw.2.zip P-GSE50973-1 ArrayExpress GSM1233520_sample_table.txt norm GSM1233520_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.processed.1.zip normal EFO EFO_0000761 GSM1233520 1 primary human: lymphoma tissue biopsy or FNA; flow-sorted CD3+ cells ML055N_CD3 normal EFO EFO_0000761 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE50973-2 ArrayExpress GSM1233520 extract 1 genomic DNA P-GSE50973-3 ArrayExpress GSM1233520 LE 1 biotin P-GSE50973-4 ArrayExpress GSM1233520 A-AFFY-142 ArrayExpress array assay P-GSE50973-5 ArrayExpress GSM1233520_Malek_019_ML55-CD3-N_GenomeWideSNP_6_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.raw.2.zip P-GSE50973-1 ArrayExpress GSM1233520_sample_table.txt norm GSM1233520_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.processed.1.zip normal EFO EFO_0000761 GSM1233519 1 primary human: lymphoma tissue biopsy or FNA; flow-sorted tumor, determined by kappa:lambda ratio ML051T_lambda Tumor EFO EFO_0000616 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE50973-2 ArrayExpress GSM1233519 extract 1 genomic DNA P-GSE50973-3 ArrayExpress GSM1233519 LE 1 biotin P-GSE50973-4 ArrayExpress GSM1233519 A-AFFY-142 ArrayExpress array assay P-GSE50973-5 ArrayExpress GSM1233519_Malek_ML051-T.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.raw.2.zip P-GSE50973-1 ArrayExpress GSM1233519_sample_table.txt norm GSM1233519_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.processed.1.zip Tumor EFO EFO_0000616 GSM1233519 1 primary human: lymphoma tissue biopsy or FNA; flow-sorted tumor, determined by kappa:lambda ratio ML051T_lambda Tumor EFO EFO_0000616 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE50973-2 ArrayExpress GSM1233519 extract 1 genomic DNA P-GSE50973-3 ArrayExpress GSM1233519 LE 1 biotin P-GSE50973-4 ArrayExpress GSM1233519 A-AFFY-142 ArrayExpress array assay P-GSE50973-5 ArrayExpress GSM1233519_Malek_006_ML51-L-T_GenomeWideSNP_6_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.raw.2.zip P-GSE50973-1 ArrayExpress GSM1233519_sample_table.txt norm GSM1233519_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.processed.1.zip Tumor EFO EFO_0000616 GSM1233518 1 primary human: lymphoma tissue biopsy or FNA; flow-sorted CD3+ cells ML051N_CD3 normal EFO EFO_0000761 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE50973-2 ArrayExpress GSM1233518 extract 1 genomic DNA P-GSE50973-3 ArrayExpress GSM1233518 LE 1 biotin P-GSE50973-4 ArrayExpress GSM1233518 A-AFFY-142 ArrayExpress array assay P-GSE50973-5 ArrayExpress GSM1233518_Malek_ML051-N.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.raw.2.zip P-GSE50973-1 ArrayExpress GSM1233518_sample_table.txt norm GSM1233518_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.processed.1.zip normal EFO EFO_0000761 GSM1233518 1 primary human: lymphoma tissue biopsy or FNA; flow-sorted CD3+ cells ML051N_CD3 normal EFO EFO_0000761 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE50973-2 ArrayExpress GSM1233518 extract 1 genomic DNA P-GSE50973-3 ArrayExpress GSM1233518 LE 1 biotin P-GSE50973-4 ArrayExpress GSM1233518 A-AFFY-142 ArrayExpress array assay P-GSE50973-5 ArrayExpress GSM1233518_Malek_018_ML51-CD3-N_GenomeWideSNP_6_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.raw.3.zip P-GSE50973-1 ArrayExpress GSM1233518_sample_table.txt norm GSM1233518_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.processed.1.zip normal EFO EFO_0000761 GSM1233517 1 primary human: lymphoma tissue biopsy or FNA; flow-sorted tumor, determined by kappa:lambda ratio ML047T_lambda Tumor EFO EFO_0000616 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE50973-2 ArrayExpress GSM1233517 extract 1 genomic DNA P-GSE50973-3 ArrayExpress GSM1233517 LE 1 biotin P-GSE50973-4 ArrayExpress GSM1233517 A-AFFY-142 ArrayExpress array assay P-GSE50973-5 ArrayExpress GSM1233517_Malek_ML047-T.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.raw.3.zip P-GSE50973-1 ArrayExpress GSM1233517_sample_table.txt norm GSM1233517_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.processed.1.zip Tumor EFO EFO_0000616 GSM1233517 1 primary human: lymphoma tissue biopsy or FNA; flow-sorted tumor, determined by kappa:lambda ratio ML047T_lambda Tumor EFO EFO_0000616 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE50973-2 ArrayExpress GSM1233517 extract 1 genomic DNA P-GSE50973-3 ArrayExpress GSM1233517 LE 1 biotin P-GSE50973-4 ArrayExpress GSM1233517 A-AFFY-142 ArrayExpress array assay P-GSE50973-5 ArrayExpress GSM1233517_Malek_005_ML47-L-T_GenomeWideSNP_6_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.raw.3.zip P-GSE50973-1 ArrayExpress GSM1233517_sample_table.txt norm GSM1233517_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.processed.1.zip Tumor EFO EFO_0000616 GSM1233516 1 primary human: lymphoma tissue biopsy or FNA; flow-sorted CD3+ cells ML047N_CD3 normal EFO EFO_0000761 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE50973-2 ArrayExpress GSM1233516 extract 1 genomic DNA P-GSE50973-3 ArrayExpress GSM1233516 LE 1 biotin P-GSE50973-4 ArrayExpress GSM1233516 A-AFFY-142 ArrayExpress array assay P-GSE50973-5 ArrayExpress GSM1233516_Malek_ML047-N.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.raw.3.zip P-GSE50973-1 ArrayExpress GSM1233516_sample_table.txt norm GSM1233516_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.processed.1.zip normal EFO EFO_0000761 GSM1233516 1 primary human: lymphoma tissue biopsy or FNA; flow-sorted CD3+ cells ML047N_CD3 normal EFO EFO_0000761 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE50973-2 ArrayExpress GSM1233516 extract 1 genomic DNA P-GSE50973-3 ArrayExpress GSM1233516 LE 1 biotin P-GSE50973-4 ArrayExpress GSM1233516 A-AFFY-142 ArrayExpress array assay P-GSE50973-5 ArrayExpress GSM1233516_Malek_017_ML47-CD3-N_GenomeWideSNP_6_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.raw.3.zip P-GSE50973-1 ArrayExpress GSM1233516_sample_table.txt norm GSM1233516_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.processed.1.zip normal EFO EFO_0000761 GSM1233515 1 primary human: lymphoma tissue biopsy or FNA; flow-sorted tumor, determined by kappa:lambda ratio ML042T_kappa Tumor EFO EFO_0000616 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE50973-2 ArrayExpress GSM1233515 extract 1 genomic DNA P-GSE50973-3 ArrayExpress GSM1233515 LE 1 biotin P-GSE50973-4 ArrayExpress GSM1233515 A-AFFY-142 ArrayExpress array assay P-GSE50973-5 ArrayExpress GSM1233515_Malek_ML042-T.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.raw.3.zip P-GSE50973-1 ArrayExpress GSM1233515_sample_table.txt norm GSM1233515_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.processed.1.zip Tumor EFO EFO_0000616 GSM1233515 1 primary human: lymphoma tissue biopsy or FNA; flow-sorted tumor, determined by kappa:lambda ratio ML042T_kappa Tumor EFO EFO_0000616 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE50973-2 ArrayExpress GSM1233515 extract 1 genomic DNA P-GSE50973-3 ArrayExpress GSM1233515 LE 1 biotin P-GSE50973-4 ArrayExpress GSM1233515 A-AFFY-142 ArrayExpress array assay P-GSE50973-5 ArrayExpress GSM1233515_Malek_004_ML42-k-T_GenomeWideSNP_6_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.raw.3.zip P-GSE50973-1 ArrayExpress GSM1233515_sample_table.txt norm GSM1233515_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.processed.1.zip Tumor EFO EFO_0000616 GSM1233514 1 primary human: lymphoma tissue biopsy or FNA; flow-sorted CD3+ cells ML042N_CD3 normal EFO EFO_0000761 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE50973-2 ArrayExpress GSM1233514 extract 1 genomic DNA P-GSE50973-3 ArrayExpress GSM1233514 LE 1 biotin P-GSE50973-4 ArrayExpress GSM1233514 A-AFFY-142 ArrayExpress array assay P-GSE50973-5 ArrayExpress GSM1233514_Malek_ML042-N.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.raw.3.zip P-GSE50973-1 ArrayExpress GSM1233514_sample_table.txt norm GSM1233514_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.processed.1.zip normal EFO EFO_0000761 GSM1233514 1 primary human: lymphoma tissue biopsy or FNA; flow-sorted CD3+ cells ML042N_CD3 normal EFO EFO_0000761 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE50973-2 ArrayExpress GSM1233514 extract 1 genomic DNA P-GSE50973-3 ArrayExpress GSM1233514 LE 1 biotin P-GSE50973-4 ArrayExpress GSM1233514 A-AFFY-142 ArrayExpress array assay P-GSE50973-5 ArrayExpress GSM1233514_Malek_016_ML42-CD3-N_GenomeWideSNP_6_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.raw.3.zip P-GSE50973-1 ArrayExpress GSM1233514_sample_table.txt norm GSM1233514_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.processed.1.zip normal EFO EFO_0000761 GSM1233513 1 primary human: lymphoma tissue biopsy or FNA; flow-sorted tumor, determined by kappa:lambda ratio ML030T_kappa_CD20 Tumor EFO EFO_0000616 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE50973-2 ArrayExpress GSM1233513 extract 1 genomic DNA P-GSE50973-3 ArrayExpress GSM1233513 LE 1 biotin P-GSE50973-4 ArrayExpress GSM1233513 A-AFFY-142 ArrayExpress array assay P-GSE50973-5 ArrayExpress GSM1233513_Malek_ML030-T.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.raw.3.zip P-GSE50973-1 ArrayExpress GSM1233513_sample_table.txt norm GSM1233513_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.processed.1.zip Tumor EFO EFO_0000616 GSM1233513 1 primary human: lymphoma tissue biopsy or FNA; flow-sorted tumor, determined by kappa:lambda ratio ML030T_kappa_CD20 Tumor EFO EFO_0000616 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE50973-2 ArrayExpress GSM1233513 extract 1 genomic DNA P-GSE50973-3 ArrayExpress GSM1233513 LE 1 biotin P-GSE50973-4 ArrayExpress GSM1233513 A-AFFY-142 ArrayExpress array assay P-GSE50973-5 ArrayExpress GSM1233513_Malek_003_ML30-20k-T_GenomeWideSNP_6_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.raw.3.zip P-GSE50973-1 ArrayExpress GSM1233513_sample_table.txt norm GSM1233513_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.processed.1.zip Tumor EFO EFO_0000616 GSM1233512 1 primary human: lymphoma tissue biopsy or FNA; flow-sorted CD3+ cells ML030N_CD3 normal EFO EFO_0000761 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE50973-2 ArrayExpress GSM1233512 extract 1 genomic DNA P-GSE50973-3 ArrayExpress GSM1233512 LE 1 biotin P-GSE50973-4 ArrayExpress GSM1233512 A-AFFY-142 ArrayExpress array assay P-GSE50973-5 ArrayExpress GSM1233512_Malek_ML030-N.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.raw.3.zip P-GSE50973-1 ArrayExpress GSM1233512_sample_table.txt norm GSM1233512_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.processed.1.zip normal EFO EFO_0000761 GSM1233512 1 primary human: lymphoma tissue biopsy or FNA; flow-sorted CD3+ cells ML030N_CD3 normal EFO EFO_0000761 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE50973-2 ArrayExpress GSM1233512 extract 1 genomic DNA P-GSE50973-3 ArrayExpress GSM1233512 LE 1 biotin P-GSE50973-4 ArrayExpress GSM1233512 A-AFFY-142 ArrayExpress array assay P-GSE50973-5 ArrayExpress GSM1233512_Malek_015_ML30-CD3-N_GenomeWideSNP_6_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.raw.3.zip P-GSE50973-1 ArrayExpress GSM1233512_sample_table.txt norm GSM1233512_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.processed.1.zip normal EFO EFO_0000761 GSM1233511 1 primary human: lymphoma tissue biopsy or FNA; flow-sorted tumor, determined by kappa:lambda ratio ML013T_lambda Tumor EFO EFO_0000616 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE50973-2 ArrayExpress GSM1233511 extract 1 genomic DNA P-GSE50973-3 ArrayExpress GSM1233511 LE 1 biotin P-GSE50973-4 ArrayExpress GSM1233511 A-AFFY-142 ArrayExpress array assay P-GSE50973-5 ArrayExpress GSM1233511_Malek_ML013-T.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.raw.3.zip P-GSE50973-1 ArrayExpress GSM1233511_sample_table.txt norm GSM1233511_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.processed.1.zip Tumor EFO EFO_0000616 GSM1233511 1 primary human: lymphoma tissue biopsy or FNA; flow-sorted tumor, determined by kappa:lambda ratio ML013T_lambda Tumor EFO EFO_0000616 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE50973-2 ArrayExpress GSM1233511 extract 1 genomic DNA P-GSE50973-3 ArrayExpress GSM1233511 LE 1 biotin P-GSE50973-4 ArrayExpress GSM1233511 A-AFFY-142 ArrayExpress array assay P-GSE50973-5 ArrayExpress GSM1233511_Malek_002_ML13-L-T_GenomeWideSNP_6_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.raw.4.zip P-GSE50973-1 ArrayExpress GSM1233511_sample_table.txt norm GSM1233511_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.processed.1.zip Tumor EFO EFO_0000616 GSM1233510 1 primary human: lymphoma tissue biopsy or FNA; flow-sorted CD3+ cells ML013N_CD3 normal EFO EFO_0000761 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE50973-2 ArrayExpress GSM1233510 extract 1 genomic DNA P-GSE50973-3 ArrayExpress GSM1233510 LE 1 biotin P-GSE50973-4 ArrayExpress GSM1233510 A-AFFY-142 ArrayExpress array assay P-GSE50973-5 ArrayExpress GSM1233510_Malek_ML013-N.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.raw.4.zip P-GSE50973-1 ArrayExpress GSM1233510_sample_table.txt norm GSM1233510_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.processed.1.zip normal EFO EFO_0000761 GSM1233510 1 primary human: lymphoma tissue biopsy or FNA; flow-sorted CD3+ cells ML013N_CD3 normal EFO EFO_0000761 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE50973-2 ArrayExpress GSM1233510 extract 1 genomic DNA P-GSE50973-3 ArrayExpress GSM1233510 LE 1 biotin P-GSE50973-4 ArrayExpress GSM1233510 A-AFFY-142 ArrayExpress array assay P-GSE50973-5 ArrayExpress GSM1233510_Malek_014_ML13-CD3-N_GenomeWideSNP_6_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.raw.4.zip P-GSE50973-1 ArrayExpress GSM1233510_sample_table.txt norm GSM1233510_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.processed.1.zip normal EFO EFO_0000761 GSM1233509 1 primary human: lymphoma tissue biopsy or FNA; flow-sorted tumor, determined by kappa:lambda ratio ML002T_kappa_CD20 Tumor EFO EFO_0000616 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE50973-2 ArrayExpress GSM1233509 extract 1 genomic DNA P-GSE50973-3 ArrayExpress GSM1233509 LE 1 biotin P-GSE50973-4 ArrayExpress GSM1233509 A-AFFY-142 ArrayExpress array assay P-GSE50973-5 ArrayExpress GSM1233509_Malek_ML002-T.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.raw.4.zip P-GSE50973-1 ArrayExpress GSM1233509_sample_table.txt norm GSM1233509_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.processed.1.zip Tumor EFO EFO_0000616 GSM1233509 1 primary human: lymphoma tissue biopsy or FNA; flow-sorted tumor, determined by kappa:lambda ratio ML002T_kappa_CD20 Tumor EFO EFO_0000616 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE50973-2 ArrayExpress GSM1233509 extract 1 genomic DNA P-GSE50973-3 ArrayExpress GSM1233509 LE 1 biotin P-GSE50973-4 ArrayExpress GSM1233509 A-AFFY-142 ArrayExpress array assay P-GSE50973-5 ArrayExpress GSM1233509_Malek_001_ML2-20k-T_GenomeWideSNP_6_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.raw.4.zip P-GSE50973-1 ArrayExpress GSM1233509_sample_table.txt norm GSM1233509_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.processed.1.zip Tumor EFO EFO_0000616 GSM1233508 1 primary human: lymphoma tissue biopsy or FNA; flow-sorted CD3+ cells ML002N_CD3 normal EFO EFO_0000761 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE50973-2 ArrayExpress GSM1233508 extract 1 genomic DNA P-GSE50973-3 ArrayExpress GSM1233508 LE 1 biotin P-GSE50973-4 ArrayExpress GSM1233508 A-AFFY-142 ArrayExpress array assay P-GSE50973-5 ArrayExpress GSM1233508_Malek_ML002-N.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.raw.4.zip P-GSE50973-1 ArrayExpress GSM1233508_sample_table.txt norm GSM1233508_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.processed.1.zip normal EFO EFO_0000761 GSM1233508 1 primary human: lymphoma tissue biopsy or FNA; flow-sorted CD3+ cells ML002N_CD3 normal EFO EFO_0000761 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE50973-2 ArrayExpress GSM1233508 extract 1 genomic DNA P-GSE50973-3 ArrayExpress GSM1233508 LE 1 biotin P-GSE50973-4 ArrayExpress GSM1233508 A-AFFY-142 ArrayExpress array assay P-GSE50973-5 ArrayExpress GSM1233508_Malek_013_ML2-CD3-N_GenomeWideSNP_6_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.raw.4.zip P-GSE50973-1 ArrayExpress GSM1233508_sample_table.txt norm GSM1233508_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.processed.1.zip normal EFO EFO_0000761 GSM1233590 1 primary human: blood; FACS-sorted CD3+ cells Malek CLL-76-3-N normal EFO EFO_0000761 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE50973-2 ArrayExpress GSM1233590 extract 1 genomic DNA P-GSE50973-3 ArrayExpress GSM1233590 LE 1 biotin P-GSE50973-4 ArrayExpress GSM1233590 A-AFFY-142 ArrayExpress array assay P-GSE50973-5 ArrayExpress GSM1233590_Malek_CLL-76-3-N_GenomeWideSNP_6_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.raw.4.zip normal EFO EFO_0000761 GSM1233589 1 primary human: blood; FACS-sorted CD3+ cells Malek CLL-146-3-N normal EFO EFO_0000761 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE50973-2 ArrayExpress GSM1233589 extract 1 genomic DNA P-GSE50973-3 ArrayExpress GSM1233589 LE 1 biotin P-GSE50973-4 ArrayExpress GSM1233589 A-AFFY-142 ArrayExpress array assay P-GSE50973-5 ArrayExpress GSM1233589_Malek_CLL-146-3-N_GenomeWideSNP_6_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.raw.4.zip normal EFO EFO_0000761 GSM1233588 1 primary human: blood; FACS-sorted CD3+ cells Malek CLL-145-3-N normal EFO EFO_0000761 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE50973-2 ArrayExpress GSM1233588 extract 1 genomic DNA P-GSE50973-3 ArrayExpress GSM1233588 LE 1 biotin P-GSE50973-4 ArrayExpress GSM1233588 A-AFFY-142 ArrayExpress array assay P-GSE50973-5 ArrayExpress GSM1233588_Malek_CLL-145-3-N_GenomeWideSNP_6_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-50973/E-GEOD-50973.raw.4.zip normal EFO EFO_0000761