Source Name Characteristics [organism] Term Source REF Term Accession Number Characteristics [ecotype] Characteristics [age] Unit[time unit] Characteristics [organism part] Comment [ENA_SAMPLE] Comment [Sample_source_name] Comment [Sample_title] Protocol REF Term Source REF Protocol REF Term Source REF Protocol REF Term Source REF Extract Name Comment [INSTRUMENT_MODEL] Comment [LIBRARY_LAYOUT] Comment [LIBRARY_SELECTION] Comment [LIBRARY_SOURCE] Comment [LIBRARY_STRATEGY] Material Type Assay Name Comment [ENA_EXPERIMENT] Comment [Platform_title] Technology Type Protocol REF Term Source REF Scan Name Comment [ENA_RUN] Comment [FASTQ_URI] FactorValue[organism part] FactorValue [environmental stress] FactorValue [time] Unit[time unit] GSM1197433 1 Arabidopsis thaliana EFO http://purl.obolibrary.org/obo/NCBITaxon_3702 Col-0 12 day whole organism SRS464932 Seedling Drought-12h_nonpolyA P-GSE49325-1 ArrayExpress P-GSE49325-2 ArrayExpress P-GSE49325-3 ArrayExpress GSM1197433 extract 1 Illumina HiSeq 2000 SINGLE cDNA transcriptomic RNA-Seq total RNA GSM1197433 SRX328791 Illumina HiSeq 2000 (Arabidopsis thaliana) sequencing assay P-GSE49325-4 ArrayExpress SRR944371 SRR944371 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR944/SRR944371/SRR944371.fastq.gz whole organism drought environment 12 hour GSM1197432 1 Arabidopsis thaliana EFO http://purl.obolibrary.org/obo/NCBITaxon_3702 Col-0 12 day whole organism SRS464931 Seedling Drought-3h_nonpolyA P-GSE49325-1 ArrayExpress P-GSE49325-2 ArrayExpress P-GSE49325-3 ArrayExpress GSM1197432 extract 1 Illumina HiSeq 2000 SINGLE cDNA transcriptomic RNA-Seq total RNA GSM1197432 SRX328790 Illumina HiSeq 2000 (Arabidopsis thaliana) sequencing assay P-GSE49325-4 ArrayExpress SRR944370 SRR944370 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR944/SRR944370/SRR944370.fastq.gz whole organism drought environment 3 hour GSM1197431 1 Arabidopsis thaliana EFO http://purl.obolibrary.org/obo/NCBITaxon_3702 Col-0 12 day whole organism SRS464930 Seedling Salt-12h_nonpolyA P-GSE49325-1 ArrayExpress P-GSE49325-2 ArrayExpress P-GSE49325-3 ArrayExpress GSM1197431 extract 1 Illumina HiSeq 2000 SINGLE cDNA transcriptomic RNA-Seq total RNA GSM1197431 SRX328789 Illumina HiSeq 2000 (Arabidopsis thaliana) sequencing assay P-GSE49325-4 ArrayExpress SRR944369 SRR944369 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR944/SRR944369/SRR944369.fastq.gz whole organism sodium chloride regimen 12 hour GSM1197430 1 Arabidopsis thaliana EFO http://purl.obolibrary.org/obo/NCBITaxon_3702 Col-0 12 day whole organism SRS464929 Seedling Salt-3h_nonpolyA P-GSE49325-1 ArrayExpress P-GSE49325-2 ArrayExpress P-GSE49325-3 ArrayExpress GSM1197430 extract 1 Illumina HiSeq 2000 SINGLE cDNA transcriptomic RNA-Seq total RNA GSM1197430 SRX328788 Illumina HiSeq 2000 (Arabidopsis thaliana) sequencing assay P-GSE49325-4 ArrayExpress SRR944368 SRR944368 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR944/SRR944368/SRR944368.fastq.gz whole organism sodium chloride regimen 3 hour GSM1197429 1 Arabidopsis thaliana EFO http://purl.obolibrary.org/obo/NCBITaxon_3702 Col-0 12 day whole organism SRS464928 Seedling Heat-12h_nonpolyA P-GSE49325-1 ArrayExpress P-GSE49325-2 ArrayExpress P-GSE49325-3 ArrayExpress GSM1197429 extract 1 Illumina HiSeq 2000 SINGLE cDNA transcriptomic RNA-Seq total RNA GSM1197429 SRX328787 Illumina HiSeq 2000 (Arabidopsis thaliana) sequencing assay P-GSE49325-4 ArrayExpress SRR944367 SRR944367 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR944/SRR944367/SRR944367.fastq.gz whole organism warm/hot temperature regimen 12 hour GSM1197428 1 Arabidopsis thaliana EFO http://purl.obolibrary.org/obo/NCBITaxon_3702 Col-0 12 day whole organism SRS464927 Seedling Heat-3h_nonpolyA P-GSE49325-1 ArrayExpress P-GSE49325-2 ArrayExpress P-GSE49325-3 ArrayExpress GSM1197428 extract 1 Illumina HiSeq 2000 SINGLE cDNA transcriptomic RNA-Seq total RNA GSM1197428 SRX328786 Illumina HiSeq 2000 (Arabidopsis thaliana) sequencing assay P-GSE49325-4 ArrayExpress SRR944366 SRR944366 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR944/SRR944366/SRR944366.fastq.gz whole organism warm/hot temperature regimen 3 hour GSM1197427 1 Arabidopsis thaliana EFO http://purl.obolibrary.org/obo/NCBITaxon_3702 Col-0 12 day whole organism SRS464926 Seedling Cold-12h_nonpolyA P-GSE49325-1 ArrayExpress P-GSE49325-2 ArrayExpress P-GSE49325-3 ArrayExpress GSM1197427 extract 1 Illumina HiSeq 2000 SINGLE cDNA transcriptomic RNA-Seq total RNA GSM1197427 SRX328785 Illumina HiSeq 2000 (Arabidopsis thaliana) sequencing assay P-GSE49325-4 ArrayExpress SRR944365 SRR944365 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR944/SRR944365/SRR944365.fastq.gz whole organism cold temperature regimen 12 hour GSM1197426 1 Arabidopsis thaliana EFO http://purl.obolibrary.org/obo/NCBITaxon_3702 Col-0 12 day whole organism SRS464925 Seedling Cold-3h_nonpolyA P-GSE49325-1 ArrayExpress P-GSE49325-2 ArrayExpress P-GSE49325-3 ArrayExpress GSM1197426 extract 1 Illumina HiSeq 2000 SINGLE cDNA transcriptomic RNA-Seq total RNA GSM1197426 SRX328784 Illumina HiSeq 2000 (Arabidopsis thaliana) sequencing assay P-GSE49325-4 ArrayExpress SRR944364 SRR944364 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR944/SRR944364/SRR944364.fastq.gz whole organism cold temperature regimen 3 hour GSM1197425 1 Arabidopsis thaliana EFO http://purl.obolibrary.org/obo/NCBITaxon_3702 Col-0 12 day whole organism SRS464924 Seedling Control-3h_nonpolyA P-GSE49325-1 ArrayExpress P-GSE49325-2 ArrayExpress P-GSE49325-3 ArrayExpress GSM1197425 extract 1 Illumina HiSeq 2000 SINGLE cDNA transcriptomic RNA-Seq total RNA GSM1197425 SRX328783 Illumina HiSeq 2000 (Arabidopsis thaliana) sequencing assay P-GSE49325-4 ArrayExpress SRR944363 SRR944363 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR944/SRR944363/SRR944363.fastq.gz whole organism none 3 hour GSM1197424 1 Arabidopsis thaliana EFO http://purl.obolibrary.org/obo/NCBITaxon_3702 Col-0 5 week aerial part SRS464923 Mixed tissues Tissue_mix_total P-GSE49325-1 ArrayExpress P-GSE49325-2 ArrayExpress P-GSE49325-3 ArrayExpress GSM1197424 extract 1 Illumina HiSeq 2000 PAIRED cDNA transcriptomic RNA-Seq total RNA GSM1197424 SRX328782 Illumina HiSeq 2000 (Arabidopsis thaliana) sequencing assay P-GSE49325-4 ArrayExpress SRR944362 SRR944362 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR944/SRR944362/SRR944362_1.fastq.gz aerial part none 0 hour GSM1197424 1 Arabidopsis thaliana EFO http://purl.obolibrary.org/obo/NCBITaxon_3702 Col-0 5 week aerial part SRS464923 Mixed tissues Tissue_mix_total P-GSE49325-1 ArrayExpress P-GSE49325-2 ArrayExpress P-GSE49325-3 ArrayExpress GSM1197424 extract 1 Illumina HiSeq 2000 PAIRED cDNA transcriptomic RNA-Seq total RNA GSM1197424 SRX328782 Illumina HiSeq 2000 (Arabidopsis thaliana) sequencing assay P-GSE49325-4 ArrayExpress SRR944362 SRR944362 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR944/SRR944362/SRR944362_2.fastq.gz aerial part none 0 hour