Source Name	Comment [Sample_source_name]	Comment [Sample_title]	Characteristics [disease]	Term Source REF	Term Accession Number	Characteristics [grouping according to hpv dna physical status]	Characteristics [organism]	Term Source REF	Term Accession Number	Characteristics [organism part]	Term Source REF	Term Accession Number	Characteristics [reference composition]	Protocol REF	Term Source REF	Extract Name	Material Type	Protocol REF	Term Source REF	Labeled Extract Name	Label	Protocol REF	Term Source REF	Assay Name	Array Design REF	Term Source REF	Technology Type	Protocol REF	Term Source REF	Array Data File	Comment [ArrayExpress FTP file]	Protocol REF	Term Source REF	Normalization Name	Derived Array Data File	Comment [Derived ArrayExpress FTP file]	FactorValue [GROUPING ACCORDING TO HPV DNA PHYSICAL STATUS]
GSM1196872 2	Cervical cancer sample #47	reference vs #47	cancer	EFO	EFO_0000311	Group 4_ Low HPV	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	cervix	EFO	EFO_0000979	  	P-GSE49288-4	ArrayExpress	GSM1196872 extract 2	total RNA	P-GSE49288-3	ArrayExpress	GSM1196872 LE 2	Cy5	P-GSE49288-5	ArrayExpress	GSM1196872	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196872_47_251485061437_1_1.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196872_sample_table.txt norm	GSM1196872_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	Group 4_ Low HPV
GSM1196872 1	Stratagene Human reference RNA	reference vs #47	  	  	  	  	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	  	  	  	pooling RNA from 10 Human cell lines	P-GSE49288-2	ArrayExpress	GSM1196872 extract 1	total RNA	P-GSE49288-3	ArrayExpress	GSM1196872 LE 1	Cy3	P-GSE49288-5	ArrayExpress	GSM1196872	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196872_47_251485061437_1_1.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196872_sample_table.txt norm	GSM1196872_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	not specified
GSM1196871 2	Cervical cancer sample #45	reference vs #45	cancer	EFO	EFO_0000311	Group 3_Multicopy tandem repeated integration	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	cervix	EFO	EFO_0000979	  	P-GSE49288-4	ArrayExpress	GSM1196871 extract 2	total RNA	P-GSE49288-3	ArrayExpress	GSM1196871 LE 2	Cy5	P-GSE49288-5	ArrayExpress	GSM1196871	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196871_45_251485061437_1_3.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196871_sample_table.txt norm	GSM1196871_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	Group 3_Multicopy tandem repeated integration
GSM1196871 1	Stratagene Human reference RNA	reference vs #45	  	  	  	  	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	  	  	  	pooling RNA from 10 Human cell lines	P-GSE49288-2	ArrayExpress	GSM1196871 extract 1	total RNA	P-GSE49288-3	ArrayExpress	GSM1196871 LE 1	Cy3	P-GSE49288-5	ArrayExpress	GSM1196871	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196871_45_251485061437_1_3.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196871_sample_table.txt norm	GSM1196871_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	not specified
GSM1196870 1	Stratagene Human reference RNA	reference vs #44	  	  	  	  	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	  	  	  	pooling RNA from 10 Human cell lines	P-GSE49288-2	ArrayExpress	GSM1196870 extract 1	total RNA	P-GSE49288-3	ArrayExpress	GSM1196870 LE 1	Cy3	P-GSE49288-5	ArrayExpress	GSM1196870	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196870_44_251485061436_1_1.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196870_sample_table.txt norm	GSM1196870_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	not specified
GSM1196870 2	Cervical cancer sample #44	reference vs #44	cancer	EFO	EFO_0000311	Group 3_Multicopy tandem repeated integration	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	cervix	EFO	EFO_0000979	  	P-GSE49288-4	ArrayExpress	GSM1196870 extract 2	total RNA	P-GSE49288-3	ArrayExpress	GSM1196870 LE 2	Cy5	P-GSE49288-5	ArrayExpress	GSM1196870	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196870_44_251485061436_1_1.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196870_sample_table.txt norm	GSM1196870_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	Group 3_Multicopy tandem repeated integration
GSM1196869 1	Stratagene Human reference RNA	reference vs #42	  	  	  	  	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	  	  	  	pooling RNA from 10 Human cell lines	P-GSE49288-2	ArrayExpress	GSM1196869 extract 1	total RNA	P-GSE49288-3	ArrayExpress	GSM1196869 LE 1	Cy3	P-GSE49288-5	ArrayExpress	GSM1196869	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196869_42_251485061436_1_3.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196869_sample_table.txt norm	GSM1196869_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	not specified
GSM1196869 2	Cervical cancer sample #42	reference vs #42	cancer	EFO	EFO_0000311	Group 3_Multicopy tandem repeated integration	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	cervix	EFO	EFO_0000979	  	P-GSE49288-4	ArrayExpress	GSM1196869 extract 2	total RNA	P-GSE49288-3	ArrayExpress	GSM1196869 LE 2	Cy5	P-GSE49288-5	ArrayExpress	GSM1196869	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196869_42_251485061436_1_3.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196869_sample_table.txt norm	GSM1196869_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	Group 3_Multicopy tandem repeated integration
GSM1196868 1	Stratagene Human reference RNA	reference vs #40	  	  	  	  	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	  	  	  	pooling RNA from 10 Human cell lines	P-GSE49288-2	ArrayExpress	GSM1196868 extract 1	total RNA	P-GSE49288-3	ArrayExpress	GSM1196868 LE 1	Cy3	P-GSE49288-5	ArrayExpress	GSM1196868	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196868_40_251485060868_1_1.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196868_sample_table.txt norm	GSM1196868_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	not specified
GSM1196868 2	Cervical cancer sample #40	reference vs #40	cancer	EFO	EFO_0000311	Group 1_ Single copy HPV integration with episomal components	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	cervix	EFO	EFO_0000979	  	P-GSE49288-4	ArrayExpress	GSM1196868 extract 2	total RNA	P-GSE49288-3	ArrayExpress	GSM1196868 LE 2	Cy5	P-GSE49288-5	ArrayExpress	GSM1196868	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196868_40_251485060868_1_1.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196868_sample_table.txt norm	GSM1196868_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	Group 1_ Single copy HPV integration with episomal components
GSM1196867 1	Stratagene Human reference RNA	reference vs #39	  	  	  	  	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	  	  	  	pooling RNA from 10 Human cell lines	P-GSE49288-2	ArrayExpress	GSM1196867 extract 1	total RNA	P-GSE49288-3	ArrayExpress	GSM1196867 LE 1	Cy3	P-GSE49288-5	ArrayExpress	GSM1196867	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196867_39_251485060868_1_2.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196867_sample_table.txt norm	GSM1196867_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	not specified
GSM1196867 2	Cervical cancer sample #39	reference vs #39	cancer	EFO	EFO_0000311	Group 1_ Single copy HPV integration with episomal components	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	cervix	EFO	EFO_0000979	  	P-GSE49288-4	ArrayExpress	GSM1196867 extract 2	total RNA	P-GSE49288-3	ArrayExpress	GSM1196867 LE 2	Cy5	P-GSE49288-5	ArrayExpress	GSM1196867	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196867_39_251485060868_1_2.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196867_sample_table.txt norm	GSM1196867_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	Group 1_ Single copy HPV integration with episomal components
GSM1196866 2	Cervical cancer sample #38	reference vs #38	cancer	EFO	EFO_0000311	Group 1_ Single copy HPV integration with episomal components	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	cervix	EFO	EFO_0000979	  	P-GSE49288-4	ArrayExpress	GSM1196866 extract 2	total RNA	P-GSE49288-3	ArrayExpress	GSM1196866 LE 2	Cy5	P-GSE49288-5	ArrayExpress	GSM1196866	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196866_38_251485060868_1_3.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196866_sample_table.txt norm	GSM1196866_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	Group 1_ Single copy HPV integration with episomal components
GSM1196866 1	Stratagene Human reference RNA	reference vs #38	  	  	  	  	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	  	  	  	pooling RNA from 10 Human cell lines	P-GSE49288-2	ArrayExpress	GSM1196866 extract 1	total RNA	P-GSE49288-3	ArrayExpress	GSM1196866 LE 1	Cy3	P-GSE49288-5	ArrayExpress	GSM1196866	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196866_38_251485060868_1_3.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196866_sample_table.txt norm	GSM1196866_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	not specified
GSM1196865 2	Cervical cancer sample #37	reference vs #37	cancer	EFO	EFO_0000311	Group 4_ Low HPV	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	cervix	EFO	EFO_0000979	  	P-GSE49288-4	ArrayExpress	GSM1196865 extract 2	total RNA	P-GSE49288-3	ArrayExpress	GSM1196865 LE 2	Cy5	P-GSE49288-5	ArrayExpress	GSM1196865	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196865_37_251485060868_1_4.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196865_sample_table.txt norm	GSM1196865_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	Group 4_ Low HPV
GSM1196865 1	Stratagene Human reference RNA	reference vs #37	  	  	  	  	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	  	  	  	pooling RNA from 10 Human cell lines	P-GSE49288-2	ArrayExpress	GSM1196865 extract 1	total RNA	P-GSE49288-3	ArrayExpress	GSM1196865 LE 1	Cy3	P-GSE49288-5	ArrayExpress	GSM1196865	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196865_37_251485060868_1_4.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196865_sample_table.txt norm	GSM1196865_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	not specified
GSM1196864 2	Cervical cancer sample #36	reference vs #36	cancer	EFO	EFO_0000311	Group 4_ Low HPV	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	cervix	EFO	EFO_0000979	  	P-GSE49288-4	ArrayExpress	GSM1196864 extract 2	total RNA	P-GSE49288-3	ArrayExpress	GSM1196864 LE 2	Cy5	P-GSE49288-5	ArrayExpress	GSM1196864	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196864_36_251485060867_1_1.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196864_sample_table.txt norm	GSM1196864_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	Group 4_ Low HPV
GSM1196864 1	Stratagene Human reference RNA	reference vs #36	  	  	  	  	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	  	  	  	pooling RNA from 10 Human cell lines	P-GSE49288-2	ArrayExpress	GSM1196864 extract 1	total RNA	P-GSE49288-3	ArrayExpress	GSM1196864 LE 1	Cy3	P-GSE49288-5	ArrayExpress	GSM1196864	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196864_36_251485060867_1_1.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196864_sample_table.txt norm	GSM1196864_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	not specified
GSM1196863 2	Cervical cancer sample #35	reference vs #35	cancer	EFO	EFO_0000311	Group 3_Multicopy tandem repeated integration	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	cervix	EFO	EFO_0000979	  	P-GSE49288-4	ArrayExpress	GSM1196863 extract 2	total RNA	P-GSE49288-3	ArrayExpress	GSM1196863 LE 2	Cy5	P-GSE49288-5	ArrayExpress	GSM1196863	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196863_35_251485060867_1_2.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196863_sample_table.txt norm	GSM1196863_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	Group 3_Multicopy tandem repeated integration
GSM1196863 1	Stratagene Human reference RNA	reference vs #35	  	  	  	  	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	  	  	  	pooling RNA from 10 Human cell lines	P-GSE49288-2	ArrayExpress	GSM1196863 extract 1	total RNA	P-GSE49288-3	ArrayExpress	GSM1196863 LE 1	Cy3	P-GSE49288-5	ArrayExpress	GSM1196863	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196863_35_251485060867_1_2.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196863_sample_table.txt norm	GSM1196863_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	not specified
GSM1196862 2	Cervical cancer sample #34	reference vs #34	cancer	EFO	EFO_0000311	Group 3_Multicopy tandem repeated integration	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	cervix	EFO	EFO_0000979	  	P-GSE49288-4	ArrayExpress	GSM1196862 extract 2	total RNA	P-GSE49288-3	ArrayExpress	GSM1196862 LE 2	Cy5	P-GSE49288-5	ArrayExpress	GSM1196862	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196862_34_251485060867_1_3.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196862_sample_table.txt norm	GSM1196862_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	Group 3_Multicopy tandem repeated integration
GSM1196862 1	Stratagene Human reference RNA	reference vs #34	  	  	  	  	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	  	  	  	pooling RNA from 10 Human cell lines	P-GSE49288-2	ArrayExpress	GSM1196862 extract 1	total RNA	P-GSE49288-3	ArrayExpress	GSM1196862 LE 1	Cy3	P-GSE49288-5	ArrayExpress	GSM1196862	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196862_34_251485060867_1_3.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196862_sample_table.txt norm	GSM1196862_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	not specified
GSM1196861 2	Cervical cancer sample #33	reference vs #33	cancer	EFO	EFO_0000311	Group 4_ Low HPV	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	cervix	EFO	EFO_0000979	  	P-GSE49288-4	ArrayExpress	GSM1196861 extract 2	total RNA	P-GSE49288-3	ArrayExpress	GSM1196861 LE 2	Cy5	P-GSE49288-5	ArrayExpress	GSM1196861	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196861_33_251485060867_1_4.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196861_sample_table.txt norm	GSM1196861_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	Group 4_ Low HPV
GSM1196861 1	Stratagene Human reference RNA	reference vs #33	  	  	  	  	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	  	  	  	pooling RNA from 10 Human cell lines	P-GSE49288-2	ArrayExpress	GSM1196861 extract 1	total RNA	P-GSE49288-3	ArrayExpress	GSM1196861 LE 1	Cy3	P-GSE49288-5	ArrayExpress	GSM1196861	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196861_33_251485060867_1_4.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196861_sample_table.txt norm	GSM1196861_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	not specified
GSM1196860 2	Cervical cancer sample #32	reference vs #32	cancer	EFO	EFO_0000311	Group 3_Multicopy tandem repeated integration	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	cervix	EFO	EFO_0000979	  	P-GSE49288-4	ArrayExpress	GSM1196860 extract 2	total RNA	P-GSE49288-3	ArrayExpress	GSM1196860 LE 2	Cy5	P-GSE49288-5	ArrayExpress	GSM1196860	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196860_32_251485060866_1_1.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196860_sample_table.txt norm	GSM1196860_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	Group 3_Multicopy tandem repeated integration
GSM1196860 1	Stratagene Human reference RNA	reference vs #32	  	  	  	  	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	  	  	  	pooling RNA from 10 Human cell lines	P-GSE49288-2	ArrayExpress	GSM1196860 extract 1	total RNA	P-GSE49288-3	ArrayExpress	GSM1196860 LE 1	Cy3	P-GSE49288-5	ArrayExpress	GSM1196860	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196860_32_251485060866_1_1.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196860_sample_table.txt norm	GSM1196860_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	not specified
GSM1196859 1	Stratagene Human reference RNA	reference vs #31	  	  	  	  	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	  	  	  	pooling RNA from 10 Human cell lines	P-GSE49288-2	ArrayExpress	GSM1196859 extract 1	total RNA	P-GSE49288-3	ArrayExpress	GSM1196859 LE 1	Cy3	P-GSE49288-5	ArrayExpress	GSM1196859	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196859_31_251485060866_1_2.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196859_sample_table.txt norm	GSM1196859_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	not specified
GSM1196859 2	Cervical cancer sample #31	reference vs #31	cancer	EFO	EFO_0000311	Group 2_ Single copy HPV integration without episomal components	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	cervix	EFO	EFO_0000979	  	P-GSE49288-4	ArrayExpress	GSM1196859 extract 2	total RNA	P-GSE49288-3	ArrayExpress	GSM1196859 LE 2	Cy5	P-GSE49288-5	ArrayExpress	GSM1196859	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196859_31_251485060866_1_2.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196859_sample_table.txt norm	GSM1196859_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	Group 2_ Single copy HPV integration without episomal components
GSM1196858 1	Stratagene Human reference RNA	reference vs #30	  	  	  	  	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	  	  	  	pooling RNA from 10 Human cell lines	P-GSE49288-2	ArrayExpress	GSM1196858 extract 1	total RNA	P-GSE49288-3	ArrayExpress	GSM1196858 LE 1	Cy3	P-GSE49288-5	ArrayExpress	GSM1196858	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196858_30_251485060866_1_3.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196858_sample_table.txt norm	GSM1196858_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	not specified
GSM1196858 2	Cervical cancer sample #30	reference vs #30	cancer	EFO	EFO_0000311	Group 2_ Single copy HPV integration without episomal components	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	cervix	EFO	EFO_0000979	  	P-GSE49288-4	ArrayExpress	GSM1196858 extract 2	total RNA	P-GSE49288-3	ArrayExpress	GSM1196858 LE 2	Cy5	P-GSE49288-5	ArrayExpress	GSM1196858	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196858_30_251485060866_1_3.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196858_sample_table.txt norm	GSM1196858_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	Group 2_ Single copy HPV integration without episomal components
GSM1196857 2	Cervical cancer sample #29	reference vs #29	cancer	EFO	EFO_0000311	Group 2_ Single copy HPV integration without episomal components	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	cervix	EFO	EFO_0000979	  	P-GSE49288-4	ArrayExpress	GSM1196857 extract 2	total RNA	P-GSE49288-3	ArrayExpress	GSM1196857 LE 2	Cy5	P-GSE49288-5	ArrayExpress	GSM1196857	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196857_29_251485060866_1_4.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196857_sample_table.txt norm	GSM1196857_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	Group 2_ Single copy HPV integration without episomal components
GSM1196857 1	Stratagene Human reference RNA	reference vs #29	  	  	  	  	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	  	  	  	pooling RNA from 10 Human cell lines	P-GSE49288-2	ArrayExpress	GSM1196857 extract 1	total RNA	P-GSE49288-3	ArrayExpress	GSM1196857 LE 1	Cy3	P-GSE49288-5	ArrayExpress	GSM1196857	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196857_29_251485060866_1_4.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196857_sample_table.txt norm	GSM1196857_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	not specified
GSM1196856 2	Cervical cancer sample #28	reference vs #28	cancer	EFO	EFO_0000311	Group 1_ Single copy HPV integration with episomal components	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	cervix	EFO	EFO_0000979	  	P-GSE49288-4	ArrayExpress	GSM1196856 extract 2	total RNA	P-GSE49288-3	ArrayExpress	GSM1196856 LE 2	Cy5	P-GSE49288-5	ArrayExpress	GSM1196856	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196856_28_251485060865_1_1.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196856_sample_table.txt norm	GSM1196856_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	Group 1_ Single copy HPV integration with episomal components
GSM1196856 1	Stratagene Human reference RNA	reference vs #28	  	  	  	  	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	  	  	  	pooling RNA from 10 Human cell lines	P-GSE49288-2	ArrayExpress	GSM1196856 extract 1	total RNA	P-GSE49288-3	ArrayExpress	GSM1196856 LE 1	Cy3	P-GSE49288-5	ArrayExpress	GSM1196856	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196856_28_251485060865_1_1.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196856_sample_table.txt norm	GSM1196856_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	not specified
GSM1196855 1	Stratagene Human reference RNA	reference vs #27	  	  	  	  	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	  	  	  	pooling RNA from 10 Human cell lines	P-GSE49288-2	ArrayExpress	GSM1196855 extract 1	total RNA	P-GSE49288-3	ArrayExpress	GSM1196855 LE 1	Cy3	P-GSE49288-5	ArrayExpress	GSM1196855	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196855_27_251485060865_1_2.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196855_sample_table.txt norm	GSM1196855_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	not specified
GSM1196855 2	Cervical cancer sample #27	reference vs #27	cancer	EFO	EFO_0000311	Group 1_ Single copy HPV integration with episomal components	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	cervix	EFO	EFO_0000979	  	P-GSE49288-4	ArrayExpress	GSM1196855 extract 2	total RNA	P-GSE49288-3	ArrayExpress	GSM1196855 LE 2	Cy5	P-GSE49288-5	ArrayExpress	GSM1196855	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196855_27_251485060865_1_2.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196855_sample_table.txt norm	GSM1196855_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	Group 1_ Single copy HPV integration with episomal components
GSM1196854 1	Stratagene Human reference RNA	reference vs #26	  	  	  	  	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	  	  	  	pooling RNA from 10 Human cell lines	P-GSE49288-2	ArrayExpress	GSM1196854 extract 1	total RNA	P-GSE49288-3	ArrayExpress	GSM1196854 LE 1	Cy3	P-GSE49288-5	ArrayExpress	GSM1196854	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196854_26_251485060865_1_3.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196854_sample_table.txt norm	GSM1196854_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	not specified
GSM1196854 2	Cervical cancer sample #26	reference vs #26	cancer	EFO	EFO_0000311	Group 3_Multicopy tandem repeated integration	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	cervix	EFO	EFO_0000979	  	P-GSE49288-4	ArrayExpress	GSM1196854 extract 2	total RNA	P-GSE49288-3	ArrayExpress	GSM1196854 LE 2	Cy5	P-GSE49288-5	ArrayExpress	GSM1196854	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196854_26_251485060865_1_3.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196854_sample_table.txt norm	GSM1196854_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	Group 3_Multicopy tandem repeated integration
GSM1196853 2	Cervical cancer sample #25	reference vs #25	cancer	EFO	EFO_0000311	Group 3_Multicopy tandem repeated integration	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	cervix	EFO	EFO_0000979	  	P-GSE49288-4	ArrayExpress	GSM1196853 extract 2	total RNA	P-GSE49288-3	ArrayExpress	GSM1196853 LE 2	Cy5	P-GSE49288-5	ArrayExpress	GSM1196853	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196853_25_251485060865_1_4.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196853_sample_table.txt norm	GSM1196853_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	Group 3_Multicopy tandem repeated integration
GSM1196853 1	Stratagene Human reference RNA	reference vs #25	  	  	  	  	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	  	  	  	pooling RNA from 10 Human cell lines	P-GSE49288-2	ArrayExpress	GSM1196853 extract 1	total RNA	P-GSE49288-3	ArrayExpress	GSM1196853 LE 1	Cy3	P-GSE49288-5	ArrayExpress	GSM1196853	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196853_25_251485060865_1_4.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196853_sample_table.txt norm	GSM1196853_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	not specified
GSM1196852 2	Cervical cancer sample #24	reference vs #24	cancer	EFO	EFO_0000311	Group 3_Multicopy tandem repeated integration	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	cervix	EFO	EFO_0000979	  	P-GSE49288-4	ArrayExpress	GSM1196852 extract 2	total RNA	P-GSE49288-3	ArrayExpress	GSM1196852 LE 2	Cy5	P-GSE49288-5	ArrayExpress	GSM1196852	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196852_24_251485060869_1_1.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196852_sample_table.txt norm	GSM1196852_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	Group 3_Multicopy tandem repeated integration
GSM1196852 1	Stratagene Human reference RNA	reference vs #24	  	  	  	  	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	  	  	  	pooling RNA from 10 Human cell lines	P-GSE49288-2	ArrayExpress	GSM1196852 extract 1	total RNA	P-GSE49288-3	ArrayExpress	GSM1196852 LE 1	Cy3	P-GSE49288-5	ArrayExpress	GSM1196852	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196852_24_251485060869_1_1.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196852_sample_table.txt norm	GSM1196852_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	not specified
GSM1196851 2	Cervical cancer sample #22	reference vs #22	cancer	EFO	EFO_0000311	Group 1_ Single copy HPV integration with episomal components	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	cervix	EFO	EFO_0000979	  	P-GSE49288-4	ArrayExpress	GSM1196851 extract 2	total RNA	P-GSE49288-3	ArrayExpress	GSM1196851 LE 2	Cy5	P-GSE49288-5	ArrayExpress	GSM1196851	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196851_22_251485060869_1_3.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196851_sample_table.txt norm	GSM1196851_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	Group 1_ Single copy HPV integration with episomal components
GSM1196851 1	Stratagene Human reference RNA	reference vs #22	  	  	  	  	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	  	  	  	pooling RNA from 10 Human cell lines	P-GSE49288-2	ArrayExpress	GSM1196851 extract 1	total RNA	P-GSE49288-3	ArrayExpress	GSM1196851 LE 1	Cy3	P-GSE49288-5	ArrayExpress	GSM1196851	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196851_22_251485060869_1_3.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196851_sample_table.txt norm	GSM1196851_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	not specified
GSM1196850 1	Stratagene Human reference RNA	reference vs #21	  	  	  	  	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	  	  	  	pooling RNA from 10 Human cell lines	P-GSE49288-2	ArrayExpress	GSM1196850 extract 1	total RNA	P-GSE49288-3	ArrayExpress	GSM1196850 LE 1	Cy3	P-GSE49288-5	ArrayExpress	GSM1196850	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196850_21_251485060869_1_4.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196850_sample_table.txt norm	GSM1196850_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	not specified
GSM1196850 2	Cervical cancer sample #21	reference vs #21	cancer	EFO	EFO_0000311	Group 1_ Single copy HPV integration with episomal components	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	cervix	EFO	EFO_0000979	  	P-GSE49288-4	ArrayExpress	GSM1196850 extract 2	total RNA	P-GSE49288-3	ArrayExpress	GSM1196850 LE 2	Cy5	P-GSE49288-5	ArrayExpress	GSM1196850	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196850_21_251485060869_1_4.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196850_sample_table.txt norm	GSM1196850_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	Group 1_ Single copy HPV integration with episomal components
GSM1196849 2	Cervical cancer sample #20	reference vs #20	cancer	EFO	EFO_0000311	Group 2_ Single copy HPV integration without episomal components	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	cervix	EFO	EFO_0000979	  	P-GSE49288-4	ArrayExpress	GSM1196849 extract 2	total RNA	P-GSE49288-3	ArrayExpress	GSM1196849 LE 2	Cy5	P-GSE49288-5	ArrayExpress	GSM1196849	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196849_20_251485060929_1_1.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196849_sample_table.txt norm	GSM1196849_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	Group 2_ Single copy HPV integration without episomal components
GSM1196849 1	Stratagene Human reference RNA	reference vs #20	  	  	  	  	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	  	  	  	pooling RNA from 10 Human cell lines	P-GSE49288-2	ArrayExpress	GSM1196849 extract 1	total RNA	P-GSE49288-3	ArrayExpress	GSM1196849 LE 1	Cy3	P-GSE49288-5	ArrayExpress	GSM1196849	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196849_20_251485060929_1_1.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196849_sample_table.txt norm	GSM1196849_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	not specified
GSM1196848 2	Cervical cancer sample #18	reference vs #18	cancer	EFO	EFO_0000311	Group 1_ Single copy HPV integration with episomal components	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	cervix	EFO	EFO_0000979	  	P-GSE49288-4	ArrayExpress	GSM1196848 extract 2	total RNA	P-GSE49288-3	ArrayExpress	GSM1196848 LE 2	Cy5	P-GSE49288-5	ArrayExpress	GSM1196848	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196848_18_251485060929_1_3.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196848_sample_table.txt norm	GSM1196848_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	Group 1_ Single copy HPV integration with episomal components
GSM1196848 1	Stratagene Human reference RNA	reference vs #18	  	  	  	  	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	  	  	  	pooling RNA from 10 Human cell lines	P-GSE49288-2	ArrayExpress	GSM1196848 extract 1	total RNA	P-GSE49288-3	ArrayExpress	GSM1196848 LE 1	Cy3	P-GSE49288-5	ArrayExpress	GSM1196848	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196848_18_251485060929_1_3.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196848_sample_table.txt norm	GSM1196848_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	not specified
GSM1196847 2	Cervical cancer sample #17	reference vs #17	cancer	EFO	EFO_0000311	Group 2_ Single copy HPV integration without episomal components	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	cervix	EFO	EFO_0000979	  	P-GSE49288-4	ArrayExpress	GSM1196847 extract 2	total RNA	P-GSE49288-3	ArrayExpress	GSM1196847 LE 2	Cy5	P-GSE49288-5	ArrayExpress	GSM1196847	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196847_17_251485060929_1_4.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196847_sample_table.txt norm	GSM1196847_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	Group 2_ Single copy HPV integration without episomal components
GSM1196847 1	Stratagene Human reference RNA	reference vs #17	  	  	  	  	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	  	  	  	pooling RNA from 10 Human cell lines	P-GSE49288-2	ArrayExpress	GSM1196847 extract 1	total RNA	P-GSE49288-3	ArrayExpress	GSM1196847 LE 1	Cy3	P-GSE49288-5	ArrayExpress	GSM1196847	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196847_17_251485060929_1_4.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196847_sample_table.txt norm	GSM1196847_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	not specified
GSM1196846 1	Stratagene Human reference RNA	reference vs #16	  	  	  	  	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	  	  	  	pooling RNA from 10 Human cell lines	P-GSE49288-2	ArrayExpress	GSM1196846 extract 1	total RNA	P-GSE49288-3	ArrayExpress	GSM1196846 LE 1	Cy3	P-GSE49288-5	ArrayExpress	GSM1196846	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196846_16_251485060928_1_1.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196846_sample_table.txt norm	GSM1196846_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	not specified
GSM1196846 2	Cervical cancer sample #16	reference vs #16	cancer	EFO	EFO_0000311	Group 2_ Single copy HPV integration without episomal components	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	cervix	EFO	EFO_0000979	  	P-GSE49288-4	ArrayExpress	GSM1196846 extract 2	total RNA	P-GSE49288-3	ArrayExpress	GSM1196846 LE 2	Cy5	P-GSE49288-5	ArrayExpress	GSM1196846	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196846_16_251485060928_1_1.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196846_sample_table.txt norm	GSM1196846_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	Group 2_ Single copy HPV integration without episomal components
GSM1196845 2	Cervical cancer sample #15	reference vs #15	cancer	EFO	EFO_0000311	Group 1_ Single copy HPV integration with episomal components	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	cervix	EFO	EFO_0000979	  	P-GSE49288-4	ArrayExpress	GSM1196845 extract 2	total RNA	P-GSE49288-3	ArrayExpress	GSM1196845 LE 2	Cy5	P-GSE49288-5	ArrayExpress	GSM1196845	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196845_15_251485060928_1_2.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196845_sample_table.txt norm	GSM1196845_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	Group 1_ Single copy HPV integration with episomal components
GSM1196845 1	Stratagene Human reference RNA	reference vs #15	  	  	  	  	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	  	  	  	pooling RNA from 10 Human cell lines	P-GSE49288-2	ArrayExpress	GSM1196845 extract 1	total RNA	P-GSE49288-3	ArrayExpress	GSM1196845 LE 1	Cy3	P-GSE49288-5	ArrayExpress	GSM1196845	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196845_15_251485060928_1_2.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196845_sample_table.txt norm	GSM1196845_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	not specified
GSM1196844 1	Stratagene Human reference RNA	reference vs #14	  	  	  	  	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	  	  	  	pooling RNA from 10 Human cell lines	P-GSE49288-2	ArrayExpress	GSM1196844 extract 1	total RNA	P-GSE49288-3	ArrayExpress	GSM1196844 LE 1	Cy3	P-GSE49288-5	ArrayExpress	GSM1196844	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196844_14_251485060928_1_3.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196844_sample_table.txt norm	GSM1196844_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	not specified
GSM1196844 2	Cervical cancer sample #14	reference vs #14	cancer	EFO	EFO_0000311	Group 2_ Single copy HPV integration without episomal components	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	cervix	EFO	EFO_0000979	  	P-GSE49288-4	ArrayExpress	GSM1196844 extract 2	total RNA	P-GSE49288-3	ArrayExpress	GSM1196844 LE 2	Cy5	P-GSE49288-5	ArrayExpress	GSM1196844	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196844_14_251485060928_1_3.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196844_sample_table.txt norm	GSM1196844_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	Group 2_ Single copy HPV integration without episomal components
GSM1196843 2	Cervical cancer sample #12	reference vs #12	cancer	EFO	EFO_0000311	Group 3_Multicopy tandem repeated integration	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	cervix	EFO	EFO_0000979	  	P-GSE49288-4	ArrayExpress	GSM1196843 extract 2	total RNA	P-GSE49288-3	ArrayExpress	GSM1196843 LE 2	Cy5	P-GSE49288-5	ArrayExpress	GSM1196843	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196843_12_251485060927_1_1.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196843_sample_table.txt norm	GSM1196843_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	Group 3_Multicopy tandem repeated integration
GSM1196843 1	Stratagene Human reference RNA	reference vs #12	  	  	  	  	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	  	  	  	pooling RNA from 10 Human cell lines	P-GSE49288-2	ArrayExpress	GSM1196843 extract 1	total RNA	P-GSE49288-3	ArrayExpress	GSM1196843 LE 1	Cy3	P-GSE49288-5	ArrayExpress	GSM1196843	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196843_12_251485060927_1_1.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196843_sample_table.txt norm	GSM1196843_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	not specified
GSM1196842 1	Stratagene Human reference RNA	reference vs #11	  	  	  	  	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	  	  	  	pooling RNA from 10 Human cell lines	P-GSE49288-2	ArrayExpress	GSM1196842 extract 1	total RNA	P-GSE49288-3	ArrayExpress	GSM1196842 LE 1	Cy3	P-GSE49288-5	ArrayExpress	GSM1196842	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196842_11_251485060927_1_2.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196842_sample_table.txt norm	GSM1196842_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	not specified
GSM1196842 2	Cervical cancer sample #11	reference vs #11	cancer	EFO	EFO_0000311	Group 2_ Single copy HPV integration without episomal components	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	cervix	EFO	EFO_0000979	  	P-GSE49288-4	ArrayExpress	GSM1196842 extract 2	total RNA	P-GSE49288-3	ArrayExpress	GSM1196842 LE 2	Cy5	P-GSE49288-5	ArrayExpress	GSM1196842	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196842_11_251485060927_1_2.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196842_sample_table.txt norm	GSM1196842_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	Group 2_ Single copy HPV integration without episomal components
GSM1196841 2	Cervical cancer sample #10	reference vs #10	cancer	EFO	EFO_0000311	Group 2_ Single copy HPV integration without episomal components	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	cervix	EFO	EFO_0000979	  	P-GSE49288-4	ArrayExpress	GSM1196841 extract 2	total RNA	P-GSE49288-3	ArrayExpress	GSM1196841 LE 2	Cy5	P-GSE49288-5	ArrayExpress	GSM1196841	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196841_10_251485060927_1_3.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196841_sample_table.txt norm	GSM1196841_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	Group 2_ Single copy HPV integration without episomal components
GSM1196841 1	Stratagene Human reference RNA	reference vs #10	  	  	  	  	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	  	  	  	pooling RNA from 10 Human cell lines	P-GSE49288-2	ArrayExpress	GSM1196841 extract 1	total RNA	P-GSE49288-3	ArrayExpress	GSM1196841 LE 1	Cy3	P-GSE49288-5	ArrayExpress	GSM1196841	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196841_10_251485060927_1_3.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196841_sample_table.txt norm	GSM1196841_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	not specified
GSM1196840 1	Stratagene Human reference RNA	reference vs #9	  	  	  	  	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	  	  	  	pooling RNA from 10 Human cell lines	P-GSE49288-2	ArrayExpress	GSM1196840 extract 1	total RNA	P-GSE49288-3	ArrayExpress	GSM1196840 LE 1	Cy3	P-GSE49288-5	ArrayExpress	GSM1196840	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196840_9_251485060927_1_4.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196840_sample_table.txt norm	GSM1196840_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	not specified
GSM1196840 2	Cervical cancer sample #9	reference vs #9	cancer	EFO	EFO_0000311	Group 1_ Single copy HPV integration with episomal components	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	cervix	EFO	EFO_0000979	  	P-GSE49288-4	ArrayExpress	GSM1196840 extract 2	total RNA	P-GSE49288-3	ArrayExpress	GSM1196840 LE 2	Cy5	P-GSE49288-5	ArrayExpress	GSM1196840	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196840_9_251485060927_1_4.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196840_sample_table.txt norm	GSM1196840_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	Group 1_ Single copy HPV integration with episomal components
GSM1196839 2	Cervical cancer sample #8	reference vs #8	cancer	EFO	EFO_0000311	Group 1_ Single copy HPV integration with episomal components	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	cervix	EFO	EFO_0000979	  	P-GSE49288-4	ArrayExpress	GSM1196839 extract 2	total RNA	P-GSE49288-3	ArrayExpress	GSM1196839 LE 2	Cy5	P-GSE49288-5	ArrayExpress	GSM1196839	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196839_8_251485060926_1_1.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196839_sample_table.txt norm	GSM1196839_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	Group 1_ Single copy HPV integration with episomal components
GSM1196839 1	Stratagene Human reference RNA	reference vs #8	  	  	  	  	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	  	  	  	pooling RNA from 10 Human cell lines	P-GSE49288-2	ArrayExpress	GSM1196839 extract 1	total RNA	P-GSE49288-3	ArrayExpress	GSM1196839 LE 1	Cy3	P-GSE49288-5	ArrayExpress	GSM1196839	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196839_8_251485060926_1_1.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196839_sample_table.txt norm	GSM1196839_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	not specified
GSM1196838 2	Cervical cancer sample #6	reference vs #6	cancer	EFO	EFO_0000311	Group 1_ Single copy HPV integration with episomal components	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	cervix	EFO	EFO_0000979	  	P-GSE49288-4	ArrayExpress	GSM1196838 extract 2	total RNA	P-GSE49288-3	ArrayExpress	GSM1196838 LE 2	Cy5	P-GSE49288-5	ArrayExpress	GSM1196838	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196838_6_251485060926_1_3.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196838_sample_table.txt norm	GSM1196838_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	Group 1_ Single copy HPV integration with episomal components
GSM1196838 1	Stratagene Human reference RNA	reference vs #6	  	  	  	  	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	  	  	  	pooling RNA from 10 Human cell lines	P-GSE49288-2	ArrayExpress	GSM1196838 extract 1	total RNA	P-GSE49288-3	ArrayExpress	GSM1196838 LE 1	Cy3	P-GSE49288-5	ArrayExpress	GSM1196838	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196838_6_251485060926_1_3.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196838_sample_table.txt norm	GSM1196838_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	not specified
GSM1196837 1	Stratagene Human reference RNA	reference vs #5	  	  	  	  	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	  	  	  	pooling RNA from 10 Human cell lines	P-GSE49288-2	ArrayExpress	GSM1196837 extract 1	total RNA	P-GSE49288-3	ArrayExpress	GSM1196837 LE 1	Cy3	P-GSE49288-5	ArrayExpress	GSM1196837	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196837_5_251485060926_1_4.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196837_sample_table.txt norm	GSM1196837_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	not specified
GSM1196837 2	Cervical cancer sample #5	reference vs #5	cancer	EFO	EFO_0000311	Group 1_ Single copy HPV integration with episomal components	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	cervix	EFO	EFO_0000979	  	P-GSE49288-4	ArrayExpress	GSM1196837 extract 2	total RNA	P-GSE49288-3	ArrayExpress	GSM1196837 LE 2	Cy5	P-GSE49288-5	ArrayExpress	GSM1196837	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196837_5_251485060926_1_4.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196837_sample_table.txt norm	GSM1196837_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	Group 1_ Single copy HPV integration with episomal components
GSM1196836 1	Stratagene Human reference RNA	reference vs #4	  	  	  	  	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	  	  	  	pooling RNA from 10 Human cell lines	P-GSE49288-2	ArrayExpress	GSM1196836 extract 1	total RNA	P-GSE49288-3	ArrayExpress	GSM1196836 LE 1	Cy3	P-GSE49288-5	ArrayExpress	GSM1196836	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196836_4_251485060925_1_1.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196836_sample_table.txt norm	GSM1196836_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	not specified
GSM1196836 2	Cervical cancer sample #4	reference vs #4	cancer	EFO	EFO_0000311	Group 3_Multicopy tandem repeated integration	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	cervix	EFO	EFO_0000979	  	P-GSE49288-4	ArrayExpress	GSM1196836 extract 2	total RNA	P-GSE49288-3	ArrayExpress	GSM1196836 LE 2	Cy5	P-GSE49288-5	ArrayExpress	GSM1196836	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196836_4_251485060925_1_1.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196836_sample_table.txt norm	GSM1196836_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	Group 3_Multicopy tandem repeated integration
GSM1196835 2	Cervical cancer sample #3	reference vs #3	cancer	EFO	EFO_0000311	Group 1_ Single copy HPV integration with episomal components	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	cervix	EFO	EFO_0000979	  	P-GSE49288-4	ArrayExpress	GSM1196835 extract 2	total RNA	P-GSE49288-3	ArrayExpress	GSM1196835 LE 2	Cy5	P-GSE49288-5	ArrayExpress	GSM1196835	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196835_3_251485060925_1_2.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196835_sample_table.txt norm	GSM1196835_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	Group 1_ Single copy HPV integration with episomal components
GSM1196835 1	Stratagene Human reference RNA	reference vs #3	  	  	  	  	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	  	  	  	pooling RNA from 10 Human cell lines	P-GSE49288-2	ArrayExpress	GSM1196835 extract 1	total RNA	P-GSE49288-3	ArrayExpress	GSM1196835 LE 1	Cy3	P-GSE49288-5	ArrayExpress	GSM1196835	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196835_3_251485060925_1_2.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196835_sample_table.txt norm	GSM1196835_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	not specified
GSM1196834 2	Cervical cancer sample #1	reference vs #1	cancer	EFO	EFO_0000311	Group 3_Multicopy tandem repeated integration	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	cervix	EFO	EFO_0000979	  	P-GSE49288-4	ArrayExpress	GSM1196834 extract 2	total RNA	P-GSE49288-3	ArrayExpress	GSM1196834 LE 2	Cy5	P-GSE49288-5	ArrayExpress	GSM1196834	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196834_1_251485060925_1_4.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196834_sample_table.txt norm	GSM1196834_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	Group 3_Multicopy tandem repeated integration
GSM1196834 1	Stratagene Human reference RNA	reference vs #1	  	  	  	  	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	  	  	  	pooling RNA from 10 Human cell lines	P-GSE49288-2	ArrayExpress	GSM1196834 extract 1	total RNA	P-GSE49288-3	ArrayExpress	GSM1196834 LE 1	Cy3	P-GSE49288-5	ArrayExpress	GSM1196834	A-AGIL-28	ArrayExpress	array assay	P-GSE49288-6	ArrayExpress	GSM1196834_1_251485060925_1_4.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.raw.1.zip	P-GSE49288-1	ArrayExpress	GSM1196834_sample_table.txt norm	GSM1196834_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-49288/E-GEOD-49288.processed.1.zip	not specified