Source Name Comment [Sample_description] Comment [Sample_source_name] Comment [Sample_title] Characteristics [developmental stage] Term Source REF Term Accession Number Characteristics [genotype] Characteristics [organism] Term Source REF Term Accession Number Characteristics [organism part] Term Source REF Term Accession Number Protocol REF Term Source REF Protocol REF Term Source REF Protocol REF Term Source REF Extract Name Material Type Protocol REF Term Source REF Labeled Extract Name Label Protocol REF Term Source REF Assay Name Array Design REF Term Source REF Technology Type Protocol REF Term Source REF Array Data File Comment [ArrayExpress FTP file] Protocol REF Term Source REF Normalization Name Derived Array Data File Comment [Derived ArrayExpress FTP file] FactorValue [diet] FactorValue [genotype] GSM1184969 1 Gene expression data from liver of ahcy+/- adult overfed O4_HET liver of ahcy+/- adult overfed Liver-Overfed-ahcy het-4 adult EFO EFO_0001272 ahcy heterozygous mutant Danio rerio EFO http://purl.obolibrary.org/obo/NCBITaxon_7955 liver EFO http://purl.obolibrary.org/obo/UBERON_0002107 P-GSE48806-2 ArrayExpress P-GSE48806-3 ArrayExpress P-GSE48806-4 ArrayExpress GSM1184969 extract 1 total RNA P-GSE48806-5 ArrayExpress GSM1184969 LE 1 biotin P-GSE48806-6 ArrayExpress GSM1184969 A-AFFY-38 ArrayExpress array assay P-GSE48806-7 ArrayExpress GSM1184969_O4_Zebrafish_121008.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48806/E-GEOD-48806.raw.1.zip P-GSE48806-1 ArrayExpress GSM1184969_sample_table.txt norm GSM1184969_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48806/E-GEOD-48806.processed.1.zip overfed ahcy heterozygous mutant GSM1184968 1 Gene expression data from liver of ahcy+/- adult overfed O1_HET liver of ahcy+/- adult overfed Liver-Overfed-ahcy het-1 adult EFO EFO_0001272 ahcy heterozygous mutant Danio rerio EFO http://purl.obolibrary.org/obo/NCBITaxon_7955 liver EFO http://purl.obolibrary.org/obo/UBERON_0002107 P-GSE48806-2 ArrayExpress P-GSE48806-3 ArrayExpress P-GSE48806-4 ArrayExpress GSM1184968 extract 1 total RNA P-GSE48806-5 ArrayExpress GSM1184968 LE 1 biotin P-GSE48806-6 ArrayExpress GSM1184968 A-AFFY-38 ArrayExpress array assay P-GSE48806-7 ArrayExpress GSM1184968_O1_Zebrafish_121008.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48806/E-GEOD-48806.raw.1.zip P-GSE48806-1 ArrayExpress GSM1184968_sample_table.txt norm GSM1184968_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48806/E-GEOD-48806.processed.1.zip overfed ahcy heterozygous mutant GSM1184967 1 Gene expression data from liver of control overfed adult O7_WT liver of control overfed adult Liver-Overfed-wt-7 adult EFO EFO_0001272 wild type Danio rerio EFO http://purl.obolibrary.org/obo/NCBITaxon_7955 liver EFO http://purl.obolibrary.org/obo/UBERON_0002107 P-GSE48806-2 ArrayExpress P-GSE48806-3 ArrayExpress P-GSE48806-4 ArrayExpress GSM1184967 extract 1 total RNA P-GSE48806-5 ArrayExpress GSM1184967 LE 1 biotin P-GSE48806-6 ArrayExpress GSM1184967 A-AFFY-38 ArrayExpress array assay P-GSE48806-7 ArrayExpress GSM1184967_O7_Zebrafish_121008.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48806/E-GEOD-48806.raw.1.zip P-GSE48806-1 ArrayExpress GSM1184967_sample_table.txt norm GSM1184967_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48806/E-GEOD-48806.processed.1.zip overfed wild type GSM1184966 1 Gene expression data from liver of control overfed adult O6_WT liver of control overfed adult Liver-Overfed-wt-6 adult EFO EFO_0001272 wild type Danio rerio EFO http://purl.obolibrary.org/obo/NCBITaxon_7955 liver EFO http://purl.obolibrary.org/obo/UBERON_0002107 P-GSE48806-2 ArrayExpress P-GSE48806-3 ArrayExpress P-GSE48806-4 ArrayExpress GSM1184966 extract 1 total RNA P-GSE48806-5 ArrayExpress GSM1184966 LE 1 biotin P-GSE48806-6 ArrayExpress GSM1184966 A-AFFY-38 ArrayExpress array assay P-GSE48806-7 ArrayExpress GSM1184966_O6_Zebrafish_121008.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48806/E-GEOD-48806.raw.1.zip P-GSE48806-1 ArrayExpress GSM1184966_sample_table.txt norm GSM1184966_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48806/E-GEOD-48806.processed.1.zip overfed wild type GSM1184965 1 Gene expression data from liver of control overfed adult O5_WT liver of control overfed adult Liver-Overfed-wt-4 adult EFO EFO_0001272 wild type Danio rerio EFO http://purl.obolibrary.org/obo/NCBITaxon_7955 liver EFO http://purl.obolibrary.org/obo/UBERON_0002107 P-GSE48806-2 ArrayExpress P-GSE48806-3 ArrayExpress P-GSE48806-4 ArrayExpress GSM1184965 extract 1 total RNA P-GSE48806-5 ArrayExpress GSM1184965 LE 1 biotin P-GSE48806-6 ArrayExpress GSM1184965 A-AFFY-38 ArrayExpress array assay P-GSE48806-7 ArrayExpress GSM1184965_O5_Zebrafish_121008.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48806/E-GEOD-48806.raw.1.zip P-GSE48806-1 ArrayExpress GSM1184965_sample_table.txt norm GSM1184965_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48806/E-GEOD-48806.processed.1.zip overfed wild type GSM1184964 1 Gene expression data from liver of control overfed adult O3_WT liver of control overfed adult Liver-Overfed-wt-3 adult EFO EFO_0001272 wild type Danio rerio EFO http://purl.obolibrary.org/obo/NCBITaxon_7955 liver EFO http://purl.obolibrary.org/obo/UBERON_0002107 P-GSE48806-2 ArrayExpress P-GSE48806-3 ArrayExpress P-GSE48806-4 ArrayExpress GSM1184964 extract 1 total RNA P-GSE48806-5 ArrayExpress GSM1184964 LE 1 biotin P-GSE48806-6 ArrayExpress GSM1184964 A-AFFY-38 ArrayExpress array assay P-GSE48806-7 ArrayExpress GSM1184964_O3_Zebrafish_121008.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48806/E-GEOD-48806.raw.1.zip P-GSE48806-1 ArrayExpress GSM1184964_sample_table.txt norm GSM1184964_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48806/E-GEOD-48806.processed.1.zip overfed wild type GSM1184963 1 Gene expression data from liver of control overfed adult O2_WT liver of control overfed adult Liver-Overfed-wt-2 adult EFO EFO_0001272 wild type Danio rerio EFO http://purl.obolibrary.org/obo/NCBITaxon_7955 liver EFO http://purl.obolibrary.org/obo/UBERON_0002107 P-GSE48806-2 ArrayExpress P-GSE48806-3 ArrayExpress P-GSE48806-4 ArrayExpress GSM1184963 extract 1 total RNA P-GSE48806-5 ArrayExpress GSM1184963 LE 1 biotin P-GSE48806-6 ArrayExpress GSM1184963 A-AFFY-38 ArrayExpress array assay P-GSE48806-7 ArrayExpress GSM1184963_O2_Zebrafish_121008.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48806/E-GEOD-48806.raw.1.zip P-GSE48806-1 ArrayExpress GSM1184963_sample_table.txt norm GSM1184963_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48806/E-GEOD-48806.processed.1.zip overfed wild type GSM1184962 1 Gene expression data from liver of ahcy+/- adult fed normal amount C8_HET liver of ahcy+/- adult fed normal amount Liver-Control-ahcy het-8 adult EFO EFO_0001272 ahcy heterozygous mutant Danio rerio EFO http://purl.obolibrary.org/obo/NCBITaxon_7955 liver EFO http://purl.obolibrary.org/obo/UBERON_0002107 P-GSE48806-2 ArrayExpress P-GSE48806-3 ArrayExpress P-GSE48806-4 ArrayExpress GSM1184962 extract 1 total RNA P-GSE48806-5 ArrayExpress GSM1184962 LE 1 biotin P-GSE48806-6 ArrayExpress GSM1184962 A-AFFY-38 ArrayExpress array assay P-GSE48806-7 ArrayExpress GSM1184962_C8_Zebrafish_121008.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48806/E-GEOD-48806.raw.1.zip P-GSE48806-1 ArrayExpress GSM1184962_sample_table.txt norm GSM1184962_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48806/E-GEOD-48806.processed.1.zip regular ahcy heterozygous mutant GSM1184961 1 Gene expression data from liver of ahcy+/- adult fed normal amount C7_HET liver of ahcy+/- adult fed normal amount Liver-Control-ahcy het-7 adult EFO EFO_0001272 ahcy heterozygous mutant Danio rerio EFO http://purl.obolibrary.org/obo/NCBITaxon_7955 liver EFO http://purl.obolibrary.org/obo/UBERON_0002107 P-GSE48806-2 ArrayExpress P-GSE48806-3 ArrayExpress P-GSE48806-4 ArrayExpress GSM1184961 extract 1 total RNA P-GSE48806-5 ArrayExpress GSM1184961 LE 1 biotin P-GSE48806-6 ArrayExpress GSM1184961 A-AFFY-38 ArrayExpress array assay P-GSE48806-7 ArrayExpress GSM1184961_C7_Zebrafish_121008.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48806/E-GEOD-48806.raw.1.zip P-GSE48806-1 ArrayExpress GSM1184961_sample_table.txt norm GSM1184961_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48806/E-GEOD-48806.processed.1.zip regular ahcy heterozygous mutant GSM1184960 1 Gene expression data from liver of ahcy+/- adult fed normal amount C3_HET liver of ahcy+/- adult fed normal amount Liver-Control-ahcy het-3 adult EFO EFO_0001272 ahcy heterozygous mutant Danio rerio EFO http://purl.obolibrary.org/obo/NCBITaxon_7955 liver EFO http://purl.obolibrary.org/obo/UBERON_0002107 P-GSE48806-2 ArrayExpress P-GSE48806-3 ArrayExpress P-GSE48806-4 ArrayExpress GSM1184960 extract 1 total RNA P-GSE48806-5 ArrayExpress GSM1184960 LE 1 biotin P-GSE48806-6 ArrayExpress GSM1184960 A-AFFY-38 ArrayExpress array assay P-GSE48806-7 ArrayExpress GSM1184960_C3_Zebrafish_121008.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48806/E-GEOD-48806.raw.1.zip P-GSE48806-1 ArrayExpress GSM1184960_sample_table.txt norm GSM1184960_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48806/E-GEOD-48806.processed.1.zip regular ahcy heterozygous mutant GSM1184959 1 Gene expression data from liver of control adult fed normal amount C9_WT liver of control adult fed normal amount Liver-Control-wt-9 adult EFO EFO_0001272 wild type Danio rerio EFO http://purl.obolibrary.org/obo/NCBITaxon_7955 liver EFO http://purl.obolibrary.org/obo/UBERON_0002107 P-GSE48806-2 ArrayExpress P-GSE48806-3 ArrayExpress P-GSE48806-4 ArrayExpress GSM1184959 extract 1 total RNA P-GSE48806-5 ArrayExpress GSM1184959 LE 1 biotin P-GSE48806-6 ArrayExpress GSM1184959 A-AFFY-38 ArrayExpress array assay P-GSE48806-7 ArrayExpress GSM1184959_C9_Zebrafish_121008.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48806/E-GEOD-48806.raw.1.zip P-GSE48806-1 ArrayExpress GSM1184959_sample_table.txt norm GSM1184959_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48806/E-GEOD-48806.processed.1.zip regular wild type GSM1184958 1 Gene expression data from liver of control adult fed normal amount C6_WT liver of control adult fed normal amount Liver-Control-wt-6 adult EFO EFO_0001272 wild type Danio rerio EFO http://purl.obolibrary.org/obo/NCBITaxon_7955 liver EFO http://purl.obolibrary.org/obo/UBERON_0002107 P-GSE48806-2 ArrayExpress P-GSE48806-3 ArrayExpress P-GSE48806-4 ArrayExpress GSM1184958 extract 1 total RNA P-GSE48806-5 ArrayExpress GSM1184958 LE 1 biotin P-GSE48806-6 ArrayExpress GSM1184958 A-AFFY-38 ArrayExpress array assay P-GSE48806-7 ArrayExpress GSM1184958_C6_Zebrafish_121008.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48806/E-GEOD-48806.raw.1.zip P-GSE48806-1 ArrayExpress GSM1184958_sample_table.txt norm GSM1184958_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48806/E-GEOD-48806.processed.1.zip regular wild type GSM1184957 1 Gene expression data from liver of control adult fed normal amount C5_WT liver of control adult fed normal amount Liver-Control-wt-5 adult EFO EFO_0001272 wild type Danio rerio EFO http://purl.obolibrary.org/obo/NCBITaxon_7955 liver EFO http://purl.obolibrary.org/obo/UBERON_0002107 P-GSE48806-2 ArrayExpress P-GSE48806-3 ArrayExpress P-GSE48806-4 ArrayExpress GSM1184957 extract 1 total RNA P-GSE48806-5 ArrayExpress GSM1184957 LE 1 biotin P-GSE48806-6 ArrayExpress GSM1184957 A-AFFY-38 ArrayExpress array assay P-GSE48806-7 ArrayExpress GSM1184957_C5_Zebrafish_121008.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48806/E-GEOD-48806.raw.1.zip P-GSE48806-1 ArrayExpress GSM1184957_sample_table.txt norm GSM1184957_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48806/E-GEOD-48806.processed.1.zip regular wild type GSM1184956 1 Gene expression data from liver of control adult fed normal amount C2_WT liver of control adult fed normal amount Liver-Control-wt-2 adult EFO EFO_0001272 wild type Danio rerio EFO http://purl.obolibrary.org/obo/NCBITaxon_7955 liver EFO http://purl.obolibrary.org/obo/UBERON_0002107 P-GSE48806-2 ArrayExpress P-GSE48806-3 ArrayExpress P-GSE48806-4 ArrayExpress GSM1184956 extract 1 total RNA P-GSE48806-5 ArrayExpress GSM1184956 LE 1 biotin P-GSE48806-6 ArrayExpress GSM1184956 A-AFFY-38 ArrayExpress array assay P-GSE48806-7 ArrayExpress GSM1184956_C2_Zebrafish_121008.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48806/E-GEOD-48806.raw.1.zip P-GSE48806-1 ArrayExpress GSM1184956_sample_table.txt norm GSM1184956_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48806/E-GEOD-48806.processed.1.zip regular wild type