Source Name	Comment [Sample_description]	Comment [Sample_source_name]	Comment [Sample_title]	Characteristics [age]	Characteristics [cell type]	Term Source REF	Term Accession Number	Characteristics [cultured with]	Characteristics [organism]	Term Source REF	Term Accession Number	Characteristics [sex]	Term Source REF	Term Accession Number	Characteristics [strain or line]	Protocol REF	Term Source REF	Protocol REF	Term Source REF	Protocol REF	Term Source REF	Extract Name	Material Type	Protocol REF	Term Source REF	Labeled Extract Name	Label	Protocol REF	Term Source REF	Assay Name	Array Design REF	Term Source REF	Technology Type	Protocol REF	Term Source REF	Array Data File	Comment [ArrayExpress FTP file]	Protocol REF	Term Source REF	Normalization Name	Derived Array Data File	Comment [Derived ArrayExpress FTP file]	FactorValue [CULTURED WITH]
GSM1182595 2	Sample 1	BMMs_RANKL	Murine Bone Marrow Macrophages: Control vs. RANKL Stimulated	8-week old	bone marrow macrophage	EFO	http://purl.org/obo/owl/CL#CL_0002476	20 ng/ml M-CSF w/ 50 ng/ml RANKL for 24 hrs	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	male	EFO	EFO_0001266	DBA1J	P-GSE48629-2	ArrayExpress	P-GSE48629-3	ArrayExpress	P-GSE48629-4	ArrayExpress	GSM1182595 extract 2	total RNA	P-GSE48629-5	ArrayExpress	GSM1182595 LE 2	Cy5	P-GSE48629-6	ArrayExpress	GSM1182595	A-MEXP-705	ArrayExpress	array assay	P-GSE48629-7	ArrayExpress	GSM1182595_BMMvsBMOc_raw_13columns.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48629/E-GEOD-48629.raw.1.zip	P-GSE48629-1	ArrayExpress	GSM1182595_sample_table.txt norm	GSM1182595_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48629/E-GEOD-48629.processed.1.zip	20 ng/ml M-CSF w/ 50 ng/ml RANKL for 24 hrs
GSM1182595 2	Sample 1	BMMs_RANKL	Murine Bone Marrow Macrophages: Control vs. RANKL Stimulated	8-week old	bone marrow macrophage	EFO	http://purl.org/obo/owl/CL#CL_0002476	20 ng/ml M-CSF w/ 50 ng/ml RANKL for 24 hrs	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	male	EFO	EFO_0001266	DBA1J	P-GSE48629-2	ArrayExpress	P-GSE48629-3	ArrayExpress	P-GSE48629-4	ArrayExpress	GSM1182595 extract 2	total RNA	P-GSE48629-5	ArrayExpress	GSM1182595 LE 2	Cy5	P-GSE48629-6	ArrayExpress	GSM1182595	A-MEXP-705	ArrayExpress	array assay	P-GSE48629-7	ArrayExpress	GSM1182595_BMMvsBMOc_raw.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48629/E-GEOD-48629.raw.1.zip	P-GSE48629-1	ArrayExpress	GSM1182595_sample_table.txt norm	GSM1182595_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48629/E-GEOD-48629.processed.1.zip	20 ng/ml M-CSF w/ 50 ng/ml RANKL for 24 hrs
GSM1182595 1	Sample 1	BMMs_control	Murine Bone Marrow Macrophages: Control vs. RANKL Stimulated	8-week old	bone marrow macrophage	EFO	http://purl.org/obo/owl/CL#CL_0002476	20 ng/ml M-CSF w/x 50 ng/ml RANKL for 24 hrs	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	male	EFO	EFO_0001266	DBA1J	P-GSE48629-2	ArrayExpress	P-GSE48629-3	ArrayExpress	P-GSE48629-4	ArrayExpress	GSM1182595 extract 1	total RNA	P-GSE48629-5	ArrayExpress	GSM1182595 LE 1	Cy3	P-GSE48629-6	ArrayExpress	GSM1182595	A-MEXP-705	ArrayExpress	array assay	P-GSE48629-7	ArrayExpress	GSM1182595_BMMvsBMOc_raw_13columns.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48629/E-GEOD-48629.raw.1.zip	P-GSE48629-1	ArrayExpress	GSM1182595_sample_table.txt norm	GSM1182595_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48629/E-GEOD-48629.processed.1.zip	20 ng/ml M-CSF w/x 50 ng/ml RANKL for 24 hrs
GSM1182595 1	Sample 1	BMMs_control	Murine Bone Marrow Macrophages: Control vs. RANKL Stimulated	8-week old	bone marrow macrophage	EFO	http://purl.org/obo/owl/CL#CL_0002476	20 ng/ml M-CSF w/x 50 ng/ml RANKL for 24 hrs	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	male	EFO	EFO_0001266	DBA1J	P-GSE48629-2	ArrayExpress	P-GSE48629-3	ArrayExpress	P-GSE48629-4	ArrayExpress	GSM1182595 extract 1	total RNA	P-GSE48629-5	ArrayExpress	GSM1182595 LE 1	Cy3	P-GSE48629-6	ArrayExpress	GSM1182595	A-MEXP-705	ArrayExpress	array assay	P-GSE48629-7	ArrayExpress	GSM1182595_BMMvsBMOc_raw.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48629/E-GEOD-48629.raw.1.zip	P-GSE48629-1	ArrayExpress	GSM1182595_sample_table.txt norm	GSM1182595_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48629/E-GEOD-48629.processed.1.zip	20 ng/ml M-CSF w/x 50 ng/ml RANKL for 24 hrs