Source Name	Comment [Sample_description]	Comment [Sample_source_name]	Comment [Sample_title]	Characteristics [developmental stage]	Characteristics [genotype]	Characteristics [grown on bacteria expressing]	Characteristics [organism]	Term Source REF	Term Accession Number	Protocol REF	Term Source REF	Protocol REF	Term Source REF	Extract Name	Material Type	Protocol REF	Term Source REF	Labeled Extract Name	Label	Protocol REF	Term Source REF	Assay Name	Array Design REF	Term Source REF	Technology Type	Protocol REF	Term Source REF	Array Data File	Comment [ArrayExpress FTP file]	Protocol REF	Term Source REF	Normalization Name	Derived Array Data File	Comment [Derived ArrayExpress FTP file]	FactorValue [GENOTYPE]	FactorValue [GROWN ON BACTERIA EXPRESSING]
GSM1175377 1	sdc-2(y93,RNAi) mixed stage embryos	embryos from XX sdc-2(y93) worms grown on bacteria expressing sdc-2 RNAi	sdc2_embryo_rep3	mixed stage embryos	sdc-2(y93)	sdc-2 RNAi	Caenorhabditis elegans	EFO	http://purl.obolibrary.org/obo/NCBITaxon_6239	P-GSE48347-2	ArrayExpress	P-GSE48347-3	ArrayExpress	GSM1175377 extract 1	total RNA	P-GSE48347-4	ArrayExpress	GSM1175377 LE 1	biotin	P-GSE48347-5	ArrayExpress	GSM1175377	A-AFFY-60	ArrayExpress	array assay	P-GSE48347-6	ArrayExpress	GSM1175377_XX_SDC2Y93R-P-022208_C.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48347/E-GEOD-48347.raw.1.zip	P-GSE48347-1	ArrayExpress	GSM1175377_sample_table.txt norm	GSM1175377_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48347/E-GEOD-48347.processed.1.zip	sdc-2(y93)	sdc-2 RNAi
GSM1175376 1	sdc-2(y93,RNAi) mixed stage embryos	embryos from XX sdc-2(y93) worms grown on bacteria expressing sdc-2 RNAi	sdc2_embryo_rep2	mixed stage embryos	sdc-2(y93)	sdc-2 RNAi	Caenorhabditis elegans	EFO	http://purl.obolibrary.org/obo/NCBITaxon_6239	P-GSE48347-2	ArrayExpress	P-GSE48347-3	ArrayExpress	GSM1175376 extract 1	total RNA	P-GSE48347-4	ArrayExpress	GSM1175376 LE 1	biotin	P-GSE48347-5	ArrayExpress	GSM1175376	A-AFFY-60	ArrayExpress	array assay	P-GSE48347-6	ArrayExpress	GSM1175376_XX_SDC2Y93R-P-022208_B.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48347/E-GEOD-48347.raw.1.zip	P-GSE48347-1	ArrayExpress	GSM1175376_sample_table.txt norm	GSM1175376_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48347/E-GEOD-48347.processed.1.zip	sdc-2(y93)	sdc-2 RNAi
GSM1175375 1	sdc-2(y93,RNAi) mixed stage embryos	embryos from XX sdc-2(y93) worms grown on bacteria expressing sdc-2 RNAi	sdc2_embryo_rep1	mixed stage embryos	sdc-2(y93)	sdc-2 RNAi	Caenorhabditis elegans	EFO	http://purl.obolibrary.org/obo/NCBITaxon_6239	P-GSE48347-2	ArrayExpress	P-GSE48347-3	ArrayExpress	GSM1175375 extract 1	total RNA	P-GSE48347-4	ArrayExpress	GSM1175375 LE 1	biotin	P-GSE48347-5	ArrayExpress	GSM1175375	A-AFFY-60	ArrayExpress	array assay	P-GSE48347-6	ArrayExpress	GSM1175375_XX_SDC2Y93R-P-022208_A.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48347/E-GEOD-48347.raw.1.zip	P-GSE48347-1	ArrayExpress	GSM1175375_sample_table.txt norm	GSM1175375_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48347/E-GEOD-48347.processed.1.zip	sdc-2(y93)	sdc-2 RNAi
GSM1175374 1	smo-1(RNAi) mixed stage embryos	embryos from XX N2 worms grown on bacteria expressing smo-1 RNAi	smo1_embryo_rep3	mixed stage embryos	Wild type (N2)	smo-1 RNAi	Caenorhabditis elegans	EFO	http://purl.obolibrary.org/obo/NCBITaxon_6239	P-GSE48347-2	ArrayExpress	P-GSE48347-3	ArrayExpress	GSM1175374 extract 1	total RNA	P-GSE48347-4	ArrayExpress	GSM1175374 LE 1	biotin	P-GSE48347-5	ArrayExpress	GSM1175374	A-AFFY-60	ArrayExpress	array assay	P-GSE48347-6	ArrayExpress	GSM1175374_SMO-1.3_10-04-07.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48347/E-GEOD-48347.raw.1.zip	P-GSE48347-1	ArrayExpress	GSM1175374_sample_table.txt norm	GSM1175374_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48347/E-GEOD-48347.processed.1.zip	Wild type (N2)	smo-1 RNAi
GSM1175373 1	smo-1(RNAi) mixed stage embryos	embryos from XX N2 worms grown on bacteria expressing smo-1 RNAi	smo1_embryo_rep2	mixed stage embryos	Wild type (N2)	smo-1 RNAi	Caenorhabditis elegans	EFO	http://purl.obolibrary.org/obo/NCBITaxon_6239	P-GSE48347-2	ArrayExpress	P-GSE48347-3	ArrayExpress	GSM1175373 extract 1	total RNA	P-GSE48347-4	ArrayExpress	GSM1175373 LE 1	biotin	P-GSE48347-5	ArrayExpress	GSM1175373	A-AFFY-60	ArrayExpress	array assay	P-GSE48347-6	ArrayExpress	GSM1175373_SMO-1.2_10-04-07.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48347/E-GEOD-48347.raw.1.zip	P-GSE48347-1	ArrayExpress	GSM1175373_sample_table.txt norm	GSM1175373_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48347/E-GEOD-48347.processed.1.zip	Wild type (N2)	smo-1 RNAi
GSM1175372 1	smo-1(RNAi) mixed stage embryos	embryos from XX N2 worms grown on bacteria expressing smo-1 RNAi	smo1_embryo_rep1	mixed stage embryos	Wild type (N2)	smo-1 RNAi	Caenorhabditis elegans	EFO	http://purl.obolibrary.org/obo/NCBITaxon_6239	P-GSE48347-2	ArrayExpress	P-GSE48347-3	ArrayExpress	GSM1175372 extract 1	total RNA	P-GSE48347-4	ArrayExpress	GSM1175372 LE 1	biotin	P-GSE48347-5	ArrayExpress	GSM1175372	A-AFFY-60	ArrayExpress	array assay	P-GSE48347-6	ArrayExpress	GSM1175372_SMO-1.1_10-04-07.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48347/E-GEOD-48347.raw.1.zip	P-GSE48347-1	ArrayExpress	GSM1175372_sample_table.txt norm	GSM1175372_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48347/E-GEOD-48347.processed.1.zip	Wild type (N2)	smo-1 RNAi
GSM1175371 1	Wild type (N2) mixed stage embryos	embryos from XX N2 worms grown on bacteria expressing empty vector (L4440) RNAi	WT_embryo_rep3	mixed stage embryos	Wild type (N2)	empty vector (L4440) RNAi	Caenorhabditis elegans	EFO	http://purl.obolibrary.org/obo/NCBITaxon_6239	P-GSE48347-2	ArrayExpress	P-GSE48347-3	ArrayExpress	GSM1175371 extract 1	total RNA	P-GSE48347-4	ArrayExpress	GSM1175371 LE 1	biotin	P-GSE48347-5	ArrayExpress	GSM1175371	A-AFFY-60	ArrayExpress	array assay	P-GSE48347-6	ArrayExpress	GSM1175371_XX_WT-P_081407_C.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48347/E-GEOD-48347.raw.1.zip	P-GSE48347-1	ArrayExpress	GSM1175371_sample_table.txt norm	GSM1175371_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48347/E-GEOD-48347.processed.1.zip	Wild type (N2)	empty vector (L4440) RNAi
GSM1175370 1	Wild type (N2) mixed stage embryos	embryos from XX N2 worms grown on bacteria expressing empty vector (L4440) RNAi	WT_embryo_rep2	mixed stage embryos	Wild type (N2)	empty vector (L4440) RNAi	Caenorhabditis elegans	EFO	http://purl.obolibrary.org/obo/NCBITaxon_6239	P-GSE48347-2	ArrayExpress	P-GSE48347-3	ArrayExpress	GSM1175370 extract 1	total RNA	P-GSE48347-4	ArrayExpress	GSM1175370 LE 1	biotin	P-GSE48347-5	ArrayExpress	GSM1175370	A-AFFY-60	ArrayExpress	array assay	P-GSE48347-6	ArrayExpress	GSM1175370_XX_WT-P_081407_B.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48347/E-GEOD-48347.raw.1.zip	P-GSE48347-1	ArrayExpress	GSM1175370_sample_table.txt norm	GSM1175370_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48347/E-GEOD-48347.processed.1.zip	Wild type (N2)	empty vector (L4440) RNAi
GSM1175369 1	Wild type (N2) mixed stage embryos	embryos from XX N2 worms grown on bacteria expressing empty vector (L4440) RNAi	WT_embryo_rep1	mixed stage embryos	Wild type (N2)	empty vector (L4440) RNAi	Caenorhabditis elegans	EFO	http://purl.obolibrary.org/obo/NCBITaxon_6239	P-GSE48347-2	ArrayExpress	P-GSE48347-3	ArrayExpress	GSM1175369 extract 1	total RNA	P-GSE48347-4	ArrayExpress	GSM1175369 LE 1	biotin	P-GSE48347-5	ArrayExpress	GSM1175369	A-AFFY-60	ArrayExpress	array assay	P-GSE48347-6	ArrayExpress	GSM1175369_XX_WT-P_081407_A.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48347/E-GEOD-48347.raw.1.zip	P-GSE48347-1	ArrayExpress	GSM1175369_sample_table.txt norm	GSM1175369_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48347/E-GEOD-48347.processed.1.zip	Wild type (N2)	empty vector (L4440) RNAi