Source Name	Comment [Sample_source_name]	Comment [Sample_title]	Characteristics [genotype]	Characteristics [organism]	Term Source REF	Term Accession Number	Characteristics[organism part]	Characteristics[developmental stage]	Protocol REF	Term Source REF	Protocol REF	Term Source REF	Protocol REF	Term Source REF	Extract Name	Material Type	Protocol REF	Term Source REF	Labeled Extract Name	Label	Protocol REF	Term Source REF	Assay Name	Array Design REF	Term Source REF	Technology Type	Protocol REF	Term Source REF	Array Data File	Comment [ArrayExpress FTP file]	Protocol REF	Term Source REF	Normalization Name	Derived Array Data File	Comment [Derived ArrayExpress FTP file]	FactorValue [genotype]
GSM1138824 1	embryos	PRDM5 KO cells 3	PRDM5 knockout	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	embryo	embryonic day 13.5	P-GSE46821-2	ArrayExpress	P-GSE46821-3	ArrayExpress	P-GSE46821-4	ArrayExpress	GSM1138824 extract 1	total RNA	P-GSE46821-5	ArrayExpress	GSM1138824 LE 1	biotin	P-GSE46821-6	ArrayExpress	GSM1138824	A-AFFY-130	ArrayExpress	array assay	P-GSE46821-7	ArrayExpress	GSM1138824_GGalli_PRDM5_KO_C.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46821/E-GEOD-46821.raw.1.zip	P-GSE46821-1	ArrayExpress	GSM1138824_sample_table.txt norm	GSM1138824_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46821/E-GEOD-46821.processed.1.zip	PRDM5 knockout
GSM1138823 1	embryos	PRDM5 KO cells 2	PRDM5 knockout	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	embryo	embryonic day 13.5	P-GSE46821-2	ArrayExpress	P-GSE46821-3	ArrayExpress	P-GSE46821-4	ArrayExpress	GSM1138823 extract 1	total RNA	P-GSE46821-5	ArrayExpress	GSM1138823 LE 1	biotin	P-GSE46821-6	ArrayExpress	GSM1138823	A-AFFY-130	ArrayExpress	array assay	P-GSE46821-7	ArrayExpress	GSM1138823_GGalli_PRDM5_KO_B.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46821/E-GEOD-46821.raw.1.zip	P-GSE46821-1	ArrayExpress	GSM1138823_sample_table.txt norm	GSM1138823_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46821/E-GEOD-46821.processed.1.zip	PRDM5 knockout
GSM1138822 1	embryos	PRDM5 KO cells 1	PRDM5 knockout	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	embryo	embryonic day 13.5	P-GSE46821-2	ArrayExpress	P-GSE46821-3	ArrayExpress	P-GSE46821-4	ArrayExpress	GSM1138822 extract 1	total RNA	P-GSE46821-5	ArrayExpress	GSM1138822 LE 1	biotin	P-GSE46821-6	ArrayExpress	GSM1138822	A-AFFY-130	ArrayExpress	array assay	P-GSE46821-7	ArrayExpress	GSM1138822_GGalli_PRDM5_KO_A.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46821/E-GEOD-46821.raw.1.zip	P-GSE46821-1	ArrayExpress	GSM1138822_sample_table.txt norm	GSM1138822_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46821/E-GEOD-46821.processed.1.zip	PRDM5 knockout
GSM1138821 1	embryos	wt cells 3	wild type	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	embryo	embryonic day 13.5	P-GSE46821-2	ArrayExpress	P-GSE46821-3	ArrayExpress	P-GSE46821-4	ArrayExpress	GSM1138821 extract 1	total RNA	P-GSE46821-5	ArrayExpress	GSM1138821 LE 1	biotin	P-GSE46821-6	ArrayExpress	GSM1138821	A-AFFY-130	ArrayExpress	array assay	P-GSE46821-7	ArrayExpress	GSM1138821_GGalli_PRDM5_WT_C.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46821/E-GEOD-46821.raw.1.zip	P-GSE46821-1	ArrayExpress	GSM1138821_sample_table.txt norm	GSM1138821_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46821/E-GEOD-46821.processed.1.zip	wild type
GSM1138820 1	embryos	wt cells 2	wild type	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	embryo	embryonic day 13.5	P-GSE46821-2	ArrayExpress	P-GSE46821-3	ArrayExpress	P-GSE46821-4	ArrayExpress	GSM1138820 extract 1	total RNA	P-GSE46821-5	ArrayExpress	GSM1138820 LE 1	biotin	P-GSE46821-6	ArrayExpress	GSM1138820	A-AFFY-130	ArrayExpress	array assay	P-GSE46821-7	ArrayExpress	GSM1138820_GGalli_PRDM5_WT_B.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46821/E-GEOD-46821.raw.1.zip	P-GSE46821-1	ArrayExpress	GSM1138820_sample_table.txt norm	GSM1138820_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46821/E-GEOD-46821.processed.1.zip	wild type
GSM1138819 1	embryos	wt cells 1	wild type	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	embryo	embryonic day 13.5	P-GSE46821-2	ArrayExpress	P-GSE46821-3	ArrayExpress	P-GSE46821-4	ArrayExpress	GSM1138819 extract 1	total RNA	P-GSE46821-5	ArrayExpress	GSM1138819 LE 1	biotin	P-GSE46821-6	ArrayExpress	GSM1138819	A-AFFY-130	ArrayExpress	array assay	P-GSE46821-7	ArrayExpress	GSM1138819_GGalli_PRDM5_WT_A.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46821/E-GEOD-46821.raw.1.zip	P-GSE46821-1	ArrayExpress	GSM1138819_sample_table.txt norm	GSM1138819_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46821/E-GEOD-46821.processed.1.zip	wild type