Source Name	Comment [Sample_source_name]	Comment [Sample_title]	Characteristics [age]	Characteristics [enrichment]	Characteristics [organism]	Term Source REF	Term Accession Number	Characteristics [organism part]	Term Source REF	Term Accession Number	Characteristics [sex]	Term Source REF	Term Accession Number	Characteristics [starting dna]	Characteristics [strain or line]	Term Source REF	Term Accession Number	Protocol REF	Term Source REF	Extract Name	Material Type	Protocol REF	Term Source REF	Labeled Extract Name	Label	Protocol REF	Term Source REF	Assay Name	Array Design REF	Term Source REF	Technology Type	FactorValue [ENRICHMENT]	FactorValue [ORGANISM PART]	Term Source REF	Term Accession Number	FactorValue [STARTING DNA]
GSM1133985 1	MBD-enriched DNA from mouse brain_starting DNA 50 ng	DNA Methylation Brain (Mouse 50 ng)	8 weeks	MBD2b/MBD3L1-enrichment of DNA followed by KLM-PCR (MeKL)	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	brain	EFO	EFO_0000302	male	EFO	EFO_0001266	50 ng	C57BL/6J	EFO	EFO_0000606	P-GSE46683-1	ArrayExpress	GSM1133985 extract 1	genomic DNA	P-GSE46683-2	ArrayExpress	GSM1133985 LE 1	Cy5	P-GSE46683-3	ArrayExpress	GSM1133985	A-GEOD-10680	ArrayExpress	array assay	MBD2b/MBD3L1-enrichment of DNA followed by KLM-PCR (MeKL)	brain	EFO	EFO_0000302	50 ng
GSM1133985 2	Input DNA from mouse brain_starting DNA 10 ng	DNA Methylation Brain (Mouse 50 ng)	8 weeks	None	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	brain	EFO	EFO_0000302	male	EFO	EFO_0001266	10 ng	C57BL/6J	EFO	EFO_0000606	P-GSE46683-1	ArrayExpress	GSM1133985 extract 2	genomic DNA	P-GSE46683-2	ArrayExpress	GSM1133985 LE 2	Cy3	P-GSE46683-3	ArrayExpress	GSM1133985	A-GEOD-10680	ArrayExpress	array assay	None	brain	EFO	EFO_0000302	10 ng
GSM1133984 1	MBD-enriched DNA from mouse retina_starting DNA 50 ng	DNA Methylation Retina (Mouse 50 ng)	8 weeks	MBD2b/MBD3L1-enrichment of DNA followed by KLM-PCR (MeKL)	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	retina	EFO	EFO_0000832	male	EFO	EFO_0001266	50 ng	C57BL/6J	EFO	EFO_0000606	P-GSE46683-1	ArrayExpress	GSM1133984 extract 1	genomic DNA	P-GSE46683-2	ArrayExpress	GSM1133984 LE 1	Cy5	P-GSE46683-3	ArrayExpress	GSM1133984	A-GEOD-10680	ArrayExpress	array assay	MBD2b/MBD3L1-enrichment of DNA followed by KLM-PCR (MeKL)	retina	EFO	EFO_0000832	50 ng
GSM1133984 2	Input DNA from mouse retina_starting DNA 10 ng	DNA Methylation Retina (Mouse 50 ng)	8 weeks	None	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	retina	EFO	EFO_0000832	male	EFO	EFO_0001266	10 ng	C57BL/6J	EFO	EFO_0000606	P-GSE46683-1	ArrayExpress	GSM1133984 extract 2	genomic DNA	P-GSE46683-2	ArrayExpress	GSM1133984 LE 2	Cy3	P-GSE46683-3	ArrayExpress	GSM1133984	A-GEOD-10680	ArrayExpress	array assay	None	retina	EFO	EFO_0000832	10 ng
GSM1133983 1	MBD-enriched DNA from mouse brain_starting DNA 25 ng	DNA Methylation Brain (Mouse 25 ng)	8 weeks	MBD2b/MBD3L1-enrichment of DNA followed by KLM-PCR (MeKL)	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	brain	EFO	EFO_0000302	male	EFO	EFO_0001266	25 ng	C57BL/6J	EFO	EFO_0000606	P-GSE46683-1	ArrayExpress	GSM1133983 extract 1	genomic DNA	P-GSE46683-2	ArrayExpress	GSM1133983 LE 1	Cy5	P-GSE46683-3	ArrayExpress	GSM1133983	A-GEOD-10680	ArrayExpress	array assay	MBD2b/MBD3L1-enrichment of DNA followed by KLM-PCR (MeKL)	brain	EFO	EFO_0000302	25 ng
GSM1133983 2	Input DNA from mouse brain_starting DNA 10 ng	DNA Methylation Brain (Mouse 25 ng)	8 weeks	None	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	brain	EFO	EFO_0000302	male	EFO	EFO_0001266	10 ng	C57BL/6J	EFO	EFO_0000606	P-GSE46683-1	ArrayExpress	GSM1133983 extract 2	genomic DNA	P-GSE46683-2	ArrayExpress	GSM1133983 LE 2	Cy3	P-GSE46683-3	ArrayExpress	GSM1133983	A-GEOD-10680	ArrayExpress	array assay	None	brain	EFO	EFO_0000302	10 ng
GSM1133982 2	Input DNA from mouse retina_starting DNA 10 ng	DNA Methylation Retina (Mouse 25 ng)	8 weeks	None	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	retina	EFO	EFO_0000832	male	EFO	EFO_0001266	10 ng	C57BL/6J	EFO	EFO_0000606	P-GSE46683-1	ArrayExpress	GSM1133982 extract 2	genomic DNA	P-GSE46683-2	ArrayExpress	GSM1133982 LE 2	Cy3	P-GSE46683-3	ArrayExpress	GSM1133982	A-GEOD-10680	ArrayExpress	array assay	None	retina	EFO	EFO_0000832	10 ng
GSM1133982 1	MBD-enriched DNA from mouse retina_starting DNA 25 ng	DNA Methylation Retina (Mouse 25 ng)	8 weeks	MBD2b/MBD3L1-enrichment of DNA followed by KLM-PCR (MeKL)	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	retina	EFO	EFO_0000832	male	EFO	EFO_0001266	25 ng	C57BL/6J	EFO	EFO_0000606	P-GSE46683-1	ArrayExpress	GSM1133982 extract 1	genomic DNA	P-GSE46683-2	ArrayExpress	GSM1133982 LE 1	Cy5	P-GSE46683-3	ArrayExpress	GSM1133982	A-GEOD-10680	ArrayExpress	array assay	MBD2b/MBD3L1-enrichment of DNA followed by KLM-PCR (MeKL)	retina	EFO	EFO_0000832	25 ng
GSM1133981 2	Input DNA from mouse brain_starting DNA 10 ng	DNA Methylation Brain (Mouse 10 ng)	8 weeks	None	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	brain	EFO	EFO_0000302	male	EFO	EFO_0001266	10 ng	C57BL/6J	EFO	EFO_0000606	P-GSE46683-1	ArrayExpress	GSM1133981 extract 2	genomic DNA	P-GSE46683-2	ArrayExpress	GSM1133981 LE 2	Cy3	P-GSE46683-3	ArrayExpress	GSM1133981	A-GEOD-10680	ArrayExpress	array assay	None	brain	EFO	EFO_0000302	10 ng
GSM1133981 1	MBD-enriched DNA from mouse brain_starting DNA 10 ng	DNA Methylation Brain (Mouse 10 ng)	8 weeks	MBD2b/MBD3L1-enrichment of DNA followed by KLM-PCR (MeKL)	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	brain	EFO	EFO_0000302	male	EFO	EFO_0001266	10 ng	C57BL/6J	EFO	EFO_0000606	P-GSE46683-1	ArrayExpress	GSM1133981 extract 1	genomic DNA	P-GSE46683-2	ArrayExpress	GSM1133981 LE 1	Cy5	P-GSE46683-3	ArrayExpress	GSM1133981	A-GEOD-10680	ArrayExpress	array assay	MBD2b/MBD3L1-enrichment of DNA followed by KLM-PCR (MeKL)	brain	EFO	EFO_0000302	10 ng
GSM1133980 1	MBD-enriched DNA from mouse retina_starting DNA 10 ng	DNA Methylation Retina (Mouse 10 ng)	8 weeks	MBD2b/MBD3L1-enrichment of DNA followed by KLM-PCR (MeKL)	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	retina	EFO	EFO_0000832	male	EFO	EFO_0001266	10 ng	C57BL/6J	EFO	EFO_0000606	P-GSE46683-1	ArrayExpress	GSM1133980 extract 1	genomic DNA	P-GSE46683-2	ArrayExpress	GSM1133980 LE 1	Cy5	P-GSE46683-3	ArrayExpress	GSM1133980	A-GEOD-10680	ArrayExpress	array assay	MBD2b/MBD3L1-enrichment of DNA followed by KLM-PCR (MeKL)	retina	EFO	EFO_0000832	10 ng
GSM1133980 2	Input DNA from mouse retina_starting DNA 10 ng	DNA Methylation Retina (Mouse 10 ng)	8 weeks	None	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	retina	EFO	EFO_0000832	male	EFO	EFO_0001266	10 ng	C57BL/6J	EFO	EFO_0000606	P-GSE46683-1	ArrayExpress	GSM1133980 extract 2	genomic DNA	P-GSE46683-2	ArrayExpress	GSM1133980 LE 2	Cy3	P-GSE46683-3	ArrayExpress	GSM1133980	A-GEOD-10680	ArrayExpress	array assay	None	retina	EFO	EFO_0000832	10 ng
GSM1133979 1	MBD-enriched DNA from mouse 3 brain_starting DNA 250 ng	DNA Methylation Brain (Mouse 3)	8 weeks	MBD2b/MBD3L1-enrichment of DNA followed by KLM-PCR (MeKL)	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	brain	EFO	EFO_0000302	male	EFO	EFO_0001266	250 ng	C57BL/6J	EFO	EFO_0000606	P-GSE46683-1	ArrayExpress	GSM1133979 extract 1	genomic DNA	P-GSE46683-2	ArrayExpress	GSM1133979 LE 1	Cy5	P-GSE46683-3	ArrayExpress	GSM1133979	A-GEOD-10680	ArrayExpress	array assay	MBD2b/MBD3L1-enrichment of DNA followed by KLM-PCR (MeKL)	brain	EFO	EFO_0000302	250 ng
GSM1133979 2	Input DNA from mouse 3 brain_starting DNA 10 ng	DNA Methylation Brain (Mouse 3)	8 weeks	None	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	brain	EFO	EFO_0000302	male	EFO	EFO_0001266	10 ng	C57BL/6J	EFO	EFO_0000606	P-GSE46683-1	ArrayExpress	GSM1133979 extract 2	genomic DNA	P-GSE46683-2	ArrayExpress	GSM1133979 LE 2	Cy3	P-GSE46683-3	ArrayExpress	GSM1133979	A-GEOD-10680	ArrayExpress	array assay	None	brain	EFO	EFO_0000302	10 ng
GSM1133978 1	MBD-enriched DNA from mouse 2 brain_starting DNA 250 ng	DNA Methylation Brain (Mouse 2)	8 weeks	MBD2b/MBD3L1-enrichment of DNA followed by KLM-PCR (MeKL)	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	brain	EFO	EFO_0000302	male	EFO	EFO_0001266	250 ng	C57BL/6J	EFO	EFO_0000606	P-GSE46683-1	ArrayExpress	GSM1133978 extract 1	genomic DNA	P-GSE46683-2	ArrayExpress	GSM1133978 LE 1	Cy5	P-GSE46683-3	ArrayExpress	GSM1133978	A-GEOD-10680	ArrayExpress	array assay	MBD2b/MBD3L1-enrichment of DNA followed by KLM-PCR (MeKL)	brain	EFO	EFO_0000302	250 ng
GSM1133978 2	Input DNA from mouse 2 brain_starting DNA 10 ng	DNA Methylation Brain (Mouse 2)	8 weeks	None	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	brain	EFO	EFO_0000302	male	EFO	EFO_0001266	10 ng	C57BL/6J	EFO	EFO_0000606	P-GSE46683-1	ArrayExpress	GSM1133978 extract 2	genomic DNA	P-GSE46683-2	ArrayExpress	GSM1133978 LE 2	Cy3	P-GSE46683-3	ArrayExpress	GSM1133978	A-GEOD-10680	ArrayExpress	array assay	None	brain	EFO	EFO_0000302	10 ng
GSM1133977 2	Input DNA from mouse 1 brain_starting DNA 10 ng	DNA Methylation Brain (Mouse 1)	8 weeks	None	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	brain	EFO	EFO_0000302	male	EFO	EFO_0001266	10 ng	C57BL/6J	EFO	EFO_0000606	P-GSE46683-1	ArrayExpress	GSM1133977 extract 2	genomic DNA	P-GSE46683-2	ArrayExpress	GSM1133977 LE 2	Cy3	P-GSE46683-3	ArrayExpress	GSM1133977	A-GEOD-10680	ArrayExpress	array assay	None	brain	EFO	EFO_0000302	10 ng
GSM1133977 1	MBD-enriched DNA from mouse 1 brain_starting DNA 250 ng	DNA Methylation Brain (Mouse 1)	8 weeks	MBD2b/MBD3L1-enrichment of DNA followed by KLM-PCR (MeKL)	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	brain	EFO	EFO_0000302	male	EFO	EFO_0001266	250 ng	C57BL/6J	EFO	EFO_0000606	P-GSE46683-1	ArrayExpress	GSM1133977 extract 1	genomic DNA	P-GSE46683-2	ArrayExpress	GSM1133977 LE 1	Cy5	P-GSE46683-3	ArrayExpress	GSM1133977	A-GEOD-10680	ArrayExpress	array assay	MBD2b/MBD3L1-enrichment of DNA followed by KLM-PCR (MeKL)	brain	EFO	EFO_0000302	250 ng
GSM1133976 1	MBD-enriched DNA from mouse 3 retina_starting DNA 250 ng	DNA Methylation Retina (Mouse 3)	8 weeks	MBD2b/MBD3L1-enrichment of DNA followed by KLM-PCR (MeKL)	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	retina	EFO	EFO_0000832	male	EFO	EFO_0001266	250 ng	C57BL/6J	EFO	EFO_0000606	P-GSE46683-1	ArrayExpress	GSM1133976 extract 1	genomic DNA	P-GSE46683-2	ArrayExpress	GSM1133976 LE 1	Cy5	P-GSE46683-3	ArrayExpress	GSM1133976	A-GEOD-10680	ArrayExpress	array assay	MBD2b/MBD3L1-enrichment of DNA followed by KLM-PCR (MeKL)	retina	EFO	EFO_0000832	250 ng
GSM1133976 2	Input DNA from mouse 3 retina_starting DNA 10 ng	DNA Methylation Retina (Mouse 3)	8 weeks	None	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	retina	EFO	EFO_0000832	male	EFO	EFO_0001266	10 ng	C57BL/6J	EFO	EFO_0000606	P-GSE46683-1	ArrayExpress	GSM1133976 extract 2	genomic DNA	P-GSE46683-2	ArrayExpress	GSM1133976 LE 2	Cy3	P-GSE46683-3	ArrayExpress	GSM1133976	A-GEOD-10680	ArrayExpress	array assay	None	retina	EFO	EFO_0000832	10 ng
GSM1133975 1	MBD-enriched DNA from mouse 2 retina_starting DNA 250 ng	DNA Methylation Retina (Mouse 2)	8 weeks	MBD2b/MBD3L1-enrichment of DNA followed by KLM-PCR (MeKL)	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	retina	EFO	EFO_0000832	male	EFO	EFO_0001266	250 ng	C57BL/6J	EFO	EFO_0000606	P-GSE46683-1	ArrayExpress	GSM1133975 extract 1	genomic DNA	P-GSE46683-2	ArrayExpress	GSM1133975 LE 1	Cy5	P-GSE46683-3	ArrayExpress	GSM1133975	A-GEOD-10680	ArrayExpress	array assay	MBD2b/MBD3L1-enrichment of DNA followed by KLM-PCR (MeKL)	retina	EFO	EFO_0000832	250 ng
GSM1133975 2	Input DNA from mouse 2 retina_starting DNA 10 ng	DNA Methylation Retina (Mouse 2)	8 weeks	None	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	retina	EFO	EFO_0000832	male	EFO	EFO_0001266	10 ng	C57BL/6J	EFO	EFO_0000606	P-GSE46683-1	ArrayExpress	GSM1133975 extract 2	genomic DNA	P-GSE46683-2	ArrayExpress	GSM1133975 LE 2	Cy3	P-GSE46683-3	ArrayExpress	GSM1133975	A-GEOD-10680	ArrayExpress	array assay	None	retina	EFO	EFO_0000832	10 ng
GSM1133974 2	Input DNA from mouse 1 retina_starting DNA 10 ng	DNA Methylation Retina (Mouse 1)	8 weeks	None	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	retina	EFO	EFO_0000832	male	EFO	EFO_0001266	10 ng	C57BL/6J	EFO	EFO_0000606	P-GSE46683-1	ArrayExpress	GSM1133974 extract 2	genomic DNA	P-GSE46683-2	ArrayExpress	GSM1133974 LE 2	Cy3	P-GSE46683-3	ArrayExpress	GSM1133974	A-GEOD-10680	ArrayExpress	array assay	None	retina	EFO	EFO_0000832	10 ng
GSM1133974 1	MBD-enriched DNA from mouse 1 retina_starting DNA 250 ng	DNA Methylation Retina (Mouse 1)	8 weeks	MBD2b/MBD3L1-enrichment of DNA followed by KLM-PCR (MeKL)	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	retina	EFO	EFO_0000832	male	EFO	EFO_0001266	250 ng	C57BL/6J	EFO	EFO_0000606	P-GSE46683-1	ArrayExpress	GSM1133974 extract 1	genomic DNA	P-GSE46683-2	ArrayExpress	GSM1133974 LE 1	Cy5	P-GSE46683-3	ArrayExpress	GSM1133974	A-GEOD-10680	ArrayExpress	array assay	MBD2b/MBD3L1-enrichment of DNA followed by KLM-PCR (MeKL)	retina	EFO	EFO_0000832	250 ng