Source Name Comment [Sample_description] Comment [Sample_source_name] Comment [Sample_title] Characteristics [fruit stage] Characteristics [genetic background] Characteristics [line] Characteristics [organism] Term Source REF Term Accession Number Characteristics [sample type] Characteristics [tissue/sector] Protocol REF Term Source REF Protocol REF Term Source REF Protocol REF Term Source REF Extract Name Material Type Protocol REF Term Source REF Labeled Extract Name Label Protocol REF Term Source REF Assay Name Array Design REF Term Source REF Technology Type Protocol REF Term Source REF Array Data File Comment [ArrayExpress FTP file] Protocol REF Term Source REF Normalization Name Derived Array Data File Comment [Derived ArrayExpress FTP file] FactorValue [FRUIT STAGE] FactorValue [TIME] FactorValue [TISSUE/SECTOR] GSM1129455 2 141.06.083 Cp1 (03.12.09) common reference Feature Expression in purple tissue at 45 dpb, replicate 1 Solanum lycopersicum EFO http://purl.obolibrary.org/obo/NCBITaxon_4081 pooled total RNA P-GSE46341-2 ArrayExpress P-GSE46341-3 ArrayExpress P-GSE46341-4 ArrayExpress GSM1129455 extract 2 total RNA P-GSE46341-5 ArrayExpress GSM1129455 LE 2 Cy3 P-GSE46341-6 ArrayExpress GSM1129455 A-GEOD-17060 ArrayExpress array assay P-GSE46341-7 ArrayExpress GSM1129455_141.06.083_Cp1_03.12.09.gpr ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.raw.1.zip P-GSE46341-1 ArrayExpress GSM1129455_sample_table.txt norm GSM1129455_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.processed.1.zip not specified not specified not specified GSM1129455 1 141.06.083 Cp1 (03.12.09) Stage C_purple tissue Feature Expression in purple tissue at 45 dpb, replicate 1 Stage C Del/Ros1 fruit in the MoneyMaker background F8DR Solanum lycopersicum EFO http://purl.obolibrary.org/obo/NCBITaxon_4081 purple P-GSE46341-2 ArrayExpress P-GSE46341-3 ArrayExpress P-GSE46341-4 ArrayExpress GSM1129455 extract 1 total RNA P-GSE46341-5 ArrayExpress GSM1129455 LE 1 Cy5 P-GSE46341-6 ArrayExpress GSM1129455 A-GEOD-17060 ArrayExpress array assay P-GSE46341-7 ArrayExpress GSM1129455_141.06.083_Cp1_03.12.09.gpr ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.raw.1.zip P-GSE46341-1 ArrayExpress GSM1129455_sample_table.txt norm GSM1129455_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.processed.1.zip Stage C 45 day after breaker purple GSM1129454 2 141.06.082 Cr1 (03.12.09) common reference Feature Expression in Red tissue at 45 dpb, replicate 1 Solanum lycopersicum EFO http://purl.obolibrary.org/obo/NCBITaxon_4081 pooled total RNA P-GSE46341-2 ArrayExpress P-GSE46341-3 ArrayExpress P-GSE46341-4 ArrayExpress GSM1129454 extract 2 total RNA P-GSE46341-5 ArrayExpress GSM1129454 LE 2 Cy3 P-GSE46341-6 ArrayExpress GSM1129454 A-GEOD-17060 ArrayExpress array assay P-GSE46341-7 ArrayExpress GSM1129454_141.06.082_Cr1_03.12.09.gpr ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.raw.1.zip P-GSE46341-1 ArrayExpress GSM1129454_sample_table.txt norm GSM1129454_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.processed.1.zip not specified not specified not specified GSM1129454 1 141.06.082 Cr1 (03.12.09) Stage C_red tissue Feature Expression in Red tissue at 45 dpb, replicate 1 Stage C Del/Ros1 fruit in the MoneyMaker background F8DR Solanum lycopersicum EFO http://purl.obolibrary.org/obo/NCBITaxon_4081 red P-GSE46341-2 ArrayExpress P-GSE46341-3 ArrayExpress P-GSE46341-4 ArrayExpress GSM1129454 extract 1 total RNA P-GSE46341-5 ArrayExpress GSM1129454 LE 1 Cy5 P-GSE46341-6 ArrayExpress GSM1129454 A-GEOD-17060 ArrayExpress array assay P-GSE46341-7 ArrayExpress GSM1129454_141.06.082_Cr1_03.12.09.gpr ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.raw.1.zip P-GSE46341-1 ArrayExpress GSM1129454_sample_table.txt norm GSM1129454_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.processed.1.zip Stage C 45 day after breaker red GSM1129453 1 141.06.081 Dr3 (08.12.09) Stage D_red tissue Feature Expression in Red tissue at 8 dpb, replicate 3 Stage D Del/Ros1 fruit in the MoneyMaker background F8DR Solanum lycopersicum EFO http://purl.obolibrary.org/obo/NCBITaxon_4081 red P-GSE46341-2 ArrayExpress P-GSE46341-3 ArrayExpress P-GSE46341-4 ArrayExpress GSM1129453 extract 1 total RNA P-GSE46341-5 ArrayExpress GSM1129453 LE 1 Cy5 P-GSE46341-6 ArrayExpress GSM1129453 A-GEOD-17060 ArrayExpress array assay P-GSE46341-7 ArrayExpress GSM1129453_141.06.081_Dr3_08.12.09.gpr ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.raw.1.zip P-GSE46341-1 ArrayExpress GSM1129453_sample_table.txt norm GSM1129453_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.processed.1.zip Stage D 8 day after breaker red GSM1129453 2 141.06.081 Dr3 (08.12.09) common reference Feature Expression in Red tissue at 8 dpb, replicate 3 Solanum lycopersicum EFO http://purl.obolibrary.org/obo/NCBITaxon_4081 pooled total RNA P-GSE46341-2 ArrayExpress P-GSE46341-3 ArrayExpress P-GSE46341-4 ArrayExpress GSM1129453 extract 2 total RNA P-GSE46341-5 ArrayExpress GSM1129453 LE 2 Cy3 P-GSE46341-6 ArrayExpress GSM1129453 A-GEOD-17060 ArrayExpress array assay P-GSE46341-7 ArrayExpress GSM1129453_141.06.081_Dr3_08.12.09.gpr ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.raw.1.zip P-GSE46341-1 ArrayExpress GSM1129453_sample_table.txt norm GSM1129453_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.processed.1.zip not specified not specified not specified GSM1129452 2 141.06.079 Dr1 (08.12.09) common reference Feature Expression in Red tissue at 8 dpb, replicate 1 Solanum lycopersicum EFO http://purl.obolibrary.org/obo/NCBITaxon_4081 pooled total RNA P-GSE46341-2 ArrayExpress P-GSE46341-3 ArrayExpress P-GSE46341-4 ArrayExpress GSM1129452 extract 2 total RNA P-GSE46341-5 ArrayExpress GSM1129452 LE 2 Cy3 P-GSE46341-6 ArrayExpress GSM1129452 A-GEOD-17060 ArrayExpress array assay P-GSE46341-7 ArrayExpress GSM1129452_141.06.079_Dr1_08.12.09.gpr ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.raw.1.zip P-GSE46341-1 ArrayExpress GSM1129452_sample_table.txt norm GSM1129452_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.processed.1.zip not specified not specified not specified GSM1129452 1 141.06.079 Dr1 (08.12.09) Stage D_red tissue Feature Expression in Red tissue at 8 dpb, replicate 1 Stage D Del/Ros1 fruit in the MoneyMaker background F8DR Solanum lycopersicum EFO http://purl.obolibrary.org/obo/NCBITaxon_4081 red P-GSE46341-2 ArrayExpress P-GSE46341-3 ArrayExpress P-GSE46341-4 ArrayExpress GSM1129452 extract 1 total RNA P-GSE46341-5 ArrayExpress GSM1129452 LE 1 Cy5 P-GSE46341-6 ArrayExpress GSM1129452 A-GEOD-17060 ArrayExpress array assay P-GSE46341-7 ArrayExpress GSM1129452_141.06.079_Dr1_08.12.09.gpr ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.raw.1.zip P-GSE46341-1 ArrayExpress GSM1129452_sample_table.txt norm GSM1129452_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.processed.1.zip Stage D 8 day after breaker red GSM1129451 1 141.06.077 Cr3 (03.12.09) Stage C_red tissue Feature Expression in Red tissue at 45 dpb, replicate 3 Stage C Del/Ros1 fruit in the MoneyMaker background F8DR Solanum lycopersicum EFO http://purl.obolibrary.org/obo/NCBITaxon_4081 red P-GSE46341-2 ArrayExpress P-GSE46341-3 ArrayExpress P-GSE46341-4 ArrayExpress GSM1129451 extract 1 total RNA P-GSE46341-5 ArrayExpress GSM1129451 LE 1 Cy5 P-GSE46341-6 ArrayExpress GSM1129451 A-GEOD-17060 ArrayExpress array assay P-GSE46341-7 ArrayExpress GSM1129451_141.06.077_Cr3_03.12.09.gpr ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.raw.1.zip P-GSE46341-1 ArrayExpress GSM1129451_sample_table.txt norm GSM1129451_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.processed.1.zip Stage C 45 day after breaker red GSM1129451 2 141.06.077 Cr3 (03.12.09) common reference Feature Expression in Red tissue at 45 dpb, replicate 3 Solanum lycopersicum EFO http://purl.obolibrary.org/obo/NCBITaxon_4081 pooled total RNA P-GSE46341-2 ArrayExpress P-GSE46341-3 ArrayExpress P-GSE46341-4 ArrayExpress GSM1129451 extract 2 total RNA P-GSE46341-5 ArrayExpress GSM1129451 LE 2 Cy3 P-GSE46341-6 ArrayExpress GSM1129451 A-GEOD-17060 ArrayExpress array assay P-GSE46341-7 ArrayExpress GSM1129451_141.06.077_Cr3_03.12.09.gpr ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.raw.1.zip P-GSE46341-1 ArrayExpress GSM1129451_sample_table.txt norm GSM1129451_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.processed.1.zip not specified not specified not specified GSM1129450 2 141.05.801 Bp2 (02.12.09) common reference Feature Expression in purple tissue at 30 dpb, replicate 2 Solanum lycopersicum EFO http://purl.obolibrary.org/obo/NCBITaxon_4081 pooled total RNA P-GSE46341-2 ArrayExpress P-GSE46341-3 ArrayExpress P-GSE46341-4 ArrayExpress GSM1129450 extract 2 total RNA P-GSE46341-5 ArrayExpress GSM1129450 LE 2 Cy3 P-GSE46341-6 ArrayExpress GSM1129450 A-GEOD-17060 ArrayExpress array assay P-GSE46341-7 ArrayExpress GSM1129450_141.05.801_Bp2_02.12.09.gpr ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.raw.1.zip P-GSE46341-1 ArrayExpress GSM1129450_sample_table.txt norm GSM1129450_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.processed.1.zip not specified not specified not specified GSM1129450 1 141.05.801 Bp2 (02.12.09) Stage B_purple tissue Feature Expression in purple tissue at 30 dpb, replicate 2 Stage B Del/Ros1 fruit in the MoneyMaker background F8DR Solanum lycopersicum EFO http://purl.obolibrary.org/obo/NCBITaxon_4081 purple P-GSE46341-2 ArrayExpress P-GSE46341-3 ArrayExpress P-GSE46341-4 ArrayExpress GSM1129450 extract 1 total RNA P-GSE46341-5 ArrayExpress GSM1129450 LE 1 Cy5 P-GSE46341-6 ArrayExpress GSM1129450 A-GEOD-17060 ArrayExpress array assay P-GSE46341-7 ArrayExpress GSM1129450_141.05.801_Bp2_02.12.09.gpr ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.raw.1.zip P-GSE46341-1 ArrayExpress GSM1129450_sample_table.txt norm GSM1129450_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.processed.1.zip Stage B 30 day after breaker purple GSM1129449 1 141.05.800 Br3 (02.12.09) Stage B_red tissue Feature Expression in Red tissue at 30 dpb, replicate 3 Stage B Del/Ros1 fruit in the MoneyMaker background F8DR Solanum lycopersicum EFO http://purl.obolibrary.org/obo/NCBITaxon_4081 red P-GSE46341-2 ArrayExpress P-GSE46341-3 ArrayExpress P-GSE46341-4 ArrayExpress GSM1129449 extract 1 total RNA P-GSE46341-5 ArrayExpress GSM1129449 LE 1 Cy5 P-GSE46341-6 ArrayExpress GSM1129449 A-GEOD-17060 ArrayExpress array assay P-GSE46341-7 ArrayExpress GSM1129449_141.05.800_Br3_02.12.09.gpr ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.raw.1.zip P-GSE46341-1 ArrayExpress GSM1129449_sample_table.txt norm GSM1129449_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.processed.1.zip Stage B 30 day after breaker red GSM1129449 2 141.05.800 Br3 (02.12.09) common reference Feature Expression in Red tissue at 30 dpb, replicate 3 Solanum lycopersicum EFO http://purl.obolibrary.org/obo/NCBITaxon_4081 pooled total RNA P-GSE46341-2 ArrayExpress P-GSE46341-3 ArrayExpress P-GSE46341-4 ArrayExpress GSM1129449 extract 2 total RNA P-GSE46341-5 ArrayExpress GSM1129449 LE 2 Cy3 P-GSE46341-6 ArrayExpress GSM1129449 A-GEOD-17060 ArrayExpress array assay P-GSE46341-7 ArrayExpress GSM1129449_141.05.800_Br3_02.12.09.gpr ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.raw.1.zip P-GSE46341-1 ArrayExpress GSM1129449_sample_table.txt norm GSM1129449_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.processed.1.zip not specified not specified not specified GSM1129448 2 141.05.799 Br1 (02.12.09) common reference Feature Expression in Red tissue at 30 dpb, replicate 1 Solanum lycopersicum EFO http://purl.obolibrary.org/obo/NCBITaxon_4081 pooled total RNA P-GSE46341-2 ArrayExpress P-GSE46341-3 ArrayExpress P-GSE46341-4 ArrayExpress GSM1129448 extract 2 total RNA P-GSE46341-5 ArrayExpress GSM1129448 LE 2 Cy3 P-GSE46341-6 ArrayExpress GSM1129448 A-GEOD-17060 ArrayExpress array assay P-GSE46341-7 ArrayExpress GSM1129448_141.05.799_Br1_02.12.09.gpr ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.raw.1.zip P-GSE46341-1 ArrayExpress GSM1129448_sample_table.txt norm GSM1129448_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.processed.1.zip not specified not specified not specified GSM1129448 1 141.05.799 Br1 (02.12.09) Stage B_red tissue Feature Expression in Red tissue at 30 dpb, replicate 1 Stage B Del/Ros1 fruit in the MoneyMaker background F8DR Solanum lycopersicum EFO http://purl.obolibrary.org/obo/NCBITaxon_4081 red P-GSE46341-2 ArrayExpress P-GSE46341-3 ArrayExpress P-GSE46341-4 ArrayExpress GSM1129448 extract 1 total RNA P-GSE46341-5 ArrayExpress GSM1129448 LE 1 Cy5 P-GSE46341-6 ArrayExpress GSM1129448 A-GEOD-17060 ArrayExpress array assay P-GSE46341-7 ArrayExpress GSM1129448_141.05.799_Br1_02.12.09.gpr ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.raw.1.zip P-GSE46341-1 ArrayExpress GSM1129448_sample_table.txt norm GSM1129448_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.processed.1.zip Stage B 30 day after breaker red GSM1129447 2 141.05.798 Bp1 (02.12.09) common reference Feature Expression in purple tissue at 30 dpb, replicate 1 Solanum lycopersicum EFO http://purl.obolibrary.org/obo/NCBITaxon_4081 pooled total RNA P-GSE46341-2 ArrayExpress P-GSE46341-3 ArrayExpress P-GSE46341-4 ArrayExpress GSM1129447 extract 2 total RNA P-GSE46341-5 ArrayExpress GSM1129447 LE 2 Cy3 P-GSE46341-6 ArrayExpress GSM1129447 A-GEOD-17060 ArrayExpress array assay P-GSE46341-7 ArrayExpress GSM1129447_141.05.798_Bp1_02.12.09.gpr ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.raw.1.zip P-GSE46341-1 ArrayExpress GSM1129447_sample_table.txt norm GSM1129447_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.processed.1.zip not specified not specified not specified GSM1129447 1 141.05.798 Bp1 (02.12.09) Stage B_purple tissue Feature Expression in purple tissue at 30 dpb, replicate 1 Stage B Del/Ros1 fruit in the MoneyMaker background F8DR Solanum lycopersicum EFO http://purl.obolibrary.org/obo/NCBITaxon_4081 purple P-GSE46341-2 ArrayExpress P-GSE46341-3 ArrayExpress P-GSE46341-4 ArrayExpress GSM1129447 extract 1 total RNA P-GSE46341-5 ArrayExpress GSM1129447 LE 1 Cy5 P-GSE46341-6 ArrayExpress GSM1129447 A-GEOD-17060 ArrayExpress array assay P-GSE46341-7 ArrayExpress GSM1129447_141.05.798_Bp1_02.12.09.gpr ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.raw.1.zip P-GSE46341-1 ArrayExpress GSM1129447_sample_table.txt norm GSM1129447_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.processed.1.zip Stage B 30 day after breaker purple GSM1129446 1 141.05.797 Bp3 (02.12.09) Stage B_purple tissue Feature Expression in purple tissue at 30 dpb, replicate 3 Stage B Del/Ros1 fruit in the MoneyMaker background F8DR Solanum lycopersicum EFO http://purl.obolibrary.org/obo/NCBITaxon_4081 purple P-GSE46341-2 ArrayExpress P-GSE46341-3 ArrayExpress P-GSE46341-4 ArrayExpress GSM1129446 extract 1 total RNA P-GSE46341-5 ArrayExpress GSM1129446 LE 1 Cy5 P-GSE46341-6 ArrayExpress GSM1129446 A-GEOD-17060 ArrayExpress array assay P-GSE46341-7 ArrayExpress GSM1129446_141.05.797_Bp3_02.12.09.gpr ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.raw.1.zip P-GSE46341-1 ArrayExpress GSM1129446_sample_table.txt norm GSM1129446_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.processed.1.zip Stage B 30 day after breaker purple GSM1129446 2 141.05.797 Bp3 (02.12.09) common reference Feature Expression in purple tissue at 30 dpb, replicate 3 Solanum lycopersicum EFO http://purl.obolibrary.org/obo/NCBITaxon_4081 pooled total RNA P-GSE46341-2 ArrayExpress P-GSE46341-3 ArrayExpress P-GSE46341-4 ArrayExpress GSM1129446 extract 2 total RNA P-GSE46341-5 ArrayExpress GSM1129446 LE 2 Cy3 P-GSE46341-6 ArrayExpress GSM1129446 A-GEOD-17060 ArrayExpress array assay P-GSE46341-7 ArrayExpress GSM1129446_141.05.797_Bp3_02.12.09.gpr ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.raw.1.zip P-GSE46341-1 ArrayExpress GSM1129446_sample_table.txt norm GSM1129446_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.processed.1.zip not specified not specified not specified GSM1129445 1 141.05.796 Br2 (02.12.09) Stage B_red tissue Feature Expression in Red tissue at 30 dpb, replicate 2 Stage B Del/Ros1 fruit in the MoneyMaker background F8DR Solanum lycopersicum EFO http://purl.obolibrary.org/obo/NCBITaxon_4081 red P-GSE46341-2 ArrayExpress P-GSE46341-3 ArrayExpress P-GSE46341-4 ArrayExpress GSM1129445 extract 1 total RNA P-GSE46341-5 ArrayExpress GSM1129445 LE 1 Cy5 P-GSE46341-6 ArrayExpress GSM1129445 A-GEOD-17060 ArrayExpress array assay P-GSE46341-7 ArrayExpress GSM1129445_141.05.796_Br2_02.12.09.gpr ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.raw.1.zip P-GSE46341-1 ArrayExpress GSM1129445_sample_table.txt norm GSM1129445_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.processed.1.zip Stage B 30 day after breaker red GSM1129445 2 141.05.796 Br2 (02.12.09) common reference Feature Expression in Red tissue at 30 dpb, replicate 2 Solanum lycopersicum EFO http://purl.obolibrary.org/obo/NCBITaxon_4081 pooled total RNA P-GSE46341-2 ArrayExpress P-GSE46341-3 ArrayExpress P-GSE46341-4 ArrayExpress GSM1129445 extract 2 total RNA P-GSE46341-5 ArrayExpress GSM1129445 LE 2 Cy3 P-GSE46341-6 ArrayExpress GSM1129445 A-GEOD-17060 ArrayExpress array assay P-GSE46341-7 ArrayExpress GSM1129445_141.05.796_Br2_02.12.09.gpr ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.raw.1.zip P-GSE46341-1 ArrayExpress GSM1129445_sample_table.txt norm GSM1129445_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.processed.1.zip not specified not specified not specified GSM1129444 2 141.05.788 Dp2(08.12.09) common reference Feature Expression in purple tissue at 8 dpb, replicate 2 Solanum lycopersicum EFO http://purl.obolibrary.org/obo/NCBITaxon_4081 pooled total RNA P-GSE46341-2 ArrayExpress P-GSE46341-3 ArrayExpress P-GSE46341-4 ArrayExpress GSM1129444 extract 2 total RNA P-GSE46341-5 ArrayExpress GSM1129444 LE 2 Cy3 P-GSE46341-6 ArrayExpress GSM1129444 A-GEOD-17060 ArrayExpress array assay P-GSE46341-7 ArrayExpress GSM1129444_141.05.788_Dp2_08.12.09.gpr ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.raw.1.zip P-GSE46341-1 ArrayExpress GSM1129444_sample_table.txt norm GSM1129444_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.processed.1.zip not specified not specified not specified GSM1129444 1 141.05.788 Dp2(08.12.09) Stage D_purple tissue Feature Expression in purple tissue at 8 dpb, replicate 2 Stage D Del/Ros1 fruit in the MoneyMaker background F8DR Solanum lycopersicum EFO http://purl.obolibrary.org/obo/NCBITaxon_4081 purple P-GSE46341-2 ArrayExpress P-GSE46341-3 ArrayExpress P-GSE46341-4 ArrayExpress GSM1129444 extract 1 total RNA P-GSE46341-5 ArrayExpress GSM1129444 LE 1 Cy5 P-GSE46341-6 ArrayExpress GSM1129444 A-GEOD-17060 ArrayExpress array assay P-GSE46341-7 ArrayExpress GSM1129444_141.05.788_Dp2_08.12.09.gpr ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.raw.1.zip P-GSE46341-1 ArrayExpress GSM1129444_sample_table.txt norm GSM1129444_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.processed.1.zip Stage D 8 day after breaker purple GSM1129443 2 141.05.786 Dr2(08.12.09) common reference Feature Expression in Red tissue at 8 dpb, replicate 2 Solanum lycopersicum EFO http://purl.obolibrary.org/obo/NCBITaxon_4081 pooled total RNA P-GSE46341-2 ArrayExpress P-GSE46341-3 ArrayExpress P-GSE46341-4 ArrayExpress GSM1129443 extract 2 total RNA P-GSE46341-5 ArrayExpress GSM1129443 LE 2 Cy3 P-GSE46341-6 ArrayExpress GSM1129443 A-GEOD-17060 ArrayExpress array assay P-GSE46341-7 ArrayExpress GSM1129443_141.05.786_Dr2_08.12.09.gpr ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.raw.1.zip P-GSE46341-1 ArrayExpress GSM1129443_sample_table.txt norm GSM1129443_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.processed.1.zip not specified not specified not specified GSM1129443 1 141.05.786 Dr2(08.12.09) Stage D_red tissue Feature Expression in Red tissue at 8 dpb, replicate 2 Stage D Del/Ros1 fruit in the MoneyMaker background F8DR Solanum lycopersicum EFO http://purl.obolibrary.org/obo/NCBITaxon_4081 red P-GSE46341-2 ArrayExpress P-GSE46341-3 ArrayExpress P-GSE46341-4 ArrayExpress GSM1129443 extract 1 total RNA P-GSE46341-5 ArrayExpress GSM1129443 LE 1 Cy5 P-GSE46341-6 ArrayExpress GSM1129443 A-GEOD-17060 ArrayExpress array assay P-GSE46341-7 ArrayExpress GSM1129443_141.05.786_Dr2_08.12.09.gpr ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.raw.1.zip P-GSE46341-1 ArrayExpress GSM1129443_sample_table.txt norm GSM1129443_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.processed.1.zip Stage D 8 day after breaker red GSM1129442 2 141.05.785 Dp3 (08.12.09) common reference Feature Expression in purple tissue at 8 dpb, replicate 3 Solanum lycopersicum EFO http://purl.obolibrary.org/obo/NCBITaxon_4081 pooled total RNA P-GSE46341-2 ArrayExpress P-GSE46341-3 ArrayExpress P-GSE46341-4 ArrayExpress GSM1129442 extract 2 total RNA P-GSE46341-5 ArrayExpress GSM1129442 LE 2 Cy3 P-GSE46341-6 ArrayExpress GSM1129442 A-GEOD-17060 ArrayExpress array assay P-GSE46341-7 ArrayExpress GSM1129442_141.05.785_Dp3_08.12.09.gpr ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.raw.1.zip P-GSE46341-1 ArrayExpress GSM1129442_sample_table.txt norm GSM1129442_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.processed.1.zip not specified not specified not specified GSM1129442 1 141.05.785 Dp3 (08.12.09) Stage D_purple tissue Feature Expression in purple tissue at 8 dpb, replicate 3 Stage D Del/Ros1 fruit in the MoneyMaker background F8DR Solanum lycopersicum EFO http://purl.obolibrary.org/obo/NCBITaxon_4081 purple P-GSE46341-2 ArrayExpress P-GSE46341-3 ArrayExpress P-GSE46341-4 ArrayExpress GSM1129442 extract 1 total RNA P-GSE46341-5 ArrayExpress GSM1129442 LE 1 Cy5 P-GSE46341-6 ArrayExpress GSM1129442 A-GEOD-17060 ArrayExpress array assay P-GSE46341-7 ArrayExpress GSM1129442_141.05.785_Dp3_08.12.09.gpr ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.raw.1.zip P-GSE46341-1 ArrayExpress GSM1129442_sample_table.txt norm GSM1129442_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.processed.1.zip Stage D 8 day after breaker purple GSM1129441 2 140.89.528 Cp3 (10.12.09) common reference Feature Expression in purple tissue at 45 dpb, replicate 3 Solanum lycopersicum EFO http://purl.obolibrary.org/obo/NCBITaxon_4081 pooled total RNA P-GSE46341-2 ArrayExpress P-GSE46341-3 ArrayExpress P-GSE46341-4 ArrayExpress GSM1129441 extract 2 total RNA P-GSE46341-5 ArrayExpress GSM1129441 LE 2 Cy3 P-GSE46341-6 ArrayExpress GSM1129441 A-GEOD-17060 ArrayExpress array assay P-GSE46341-7 ArrayExpress GSM1129441_140.89.528_Cp3_10.12.09.gpr ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.raw.1.zip P-GSE46341-1 ArrayExpress GSM1129441_sample_table.txt norm GSM1129441_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.processed.1.zip not specified not specified not specified GSM1129441 1 140.89.528 Cp3 (10.12.09) Stage C_purple tissue Feature Expression in purple tissue at 45 dpb, replicate 3 Stage C Del/Ros1 fruit in the MoneyMaker background F8DR Solanum lycopersicum EFO http://purl.obolibrary.org/obo/NCBITaxon_4081 purple P-GSE46341-2 ArrayExpress P-GSE46341-3 ArrayExpress P-GSE46341-4 ArrayExpress GSM1129441 extract 1 total RNA P-GSE46341-5 ArrayExpress GSM1129441 LE 1 Cy5 P-GSE46341-6 ArrayExpress GSM1129441 A-GEOD-17060 ArrayExpress array assay P-GSE46341-7 ArrayExpress GSM1129441_140.89.528_Cp3_10.12.09.gpr ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.raw.1.zip P-GSE46341-1 ArrayExpress GSM1129441_sample_table.txt norm GSM1129441_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.processed.1.zip Stage C 45 day after breaker purple GSM1129440 1 140.89.526 Cp2 (10.12.09) Stage C_purple tissue Feature Expression in purple tissue at 45 dpb, replicate 2 Stage C Del/Ros1 fruit in the MoneyMaker background F8DR Solanum lycopersicum EFO http://purl.obolibrary.org/obo/NCBITaxon_4081 purple P-GSE46341-2 ArrayExpress P-GSE46341-3 ArrayExpress P-GSE46341-4 ArrayExpress GSM1129440 extract 1 total RNA P-GSE46341-5 ArrayExpress GSM1129440 LE 1 Cy5 P-GSE46341-6 ArrayExpress GSM1129440 A-GEOD-17060 ArrayExpress array assay P-GSE46341-7 ArrayExpress GSM1129440_140.89.526_Cp2_10.12.09.gpr ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.raw.1.zip P-GSE46341-1 ArrayExpress GSM1129440_sample_table.txt norm GSM1129440_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.processed.1.zip Stage C 45 day after breaker purple GSM1129440 2 140.89.526 Cp2 (10.12.09) common reference Feature Expression in purple tissue at 45 dpb, replicate 2 Solanum lycopersicum EFO http://purl.obolibrary.org/obo/NCBITaxon_4081 pooled total RNA P-GSE46341-2 ArrayExpress P-GSE46341-3 ArrayExpress P-GSE46341-4 ArrayExpress GSM1129440 extract 2 total RNA P-GSE46341-5 ArrayExpress GSM1129440 LE 2 Cy3 P-GSE46341-6 ArrayExpress GSM1129440 A-GEOD-17060 ArrayExpress array assay P-GSE46341-7 ArrayExpress GSM1129440_140.89.526_Cp2_10.12.09.gpr ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.raw.1.zip P-GSE46341-1 ArrayExpress GSM1129440_sample_table.txt norm GSM1129440_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.processed.1.zip not specified not specified not specified GSM1129439 1 140.89.525 Dp1 (10.12.09) Stage D_purple tissue Feature Expression in purple tissue at 8 dpb, replicate 1 Stage D Del/Ros1 fruit in the MoneyMaker background F8DR Solanum lycopersicum EFO http://purl.obolibrary.org/obo/NCBITaxon_4081 purple P-GSE46341-2 ArrayExpress P-GSE46341-3 ArrayExpress P-GSE46341-4 ArrayExpress GSM1129439 extract 1 total RNA P-GSE46341-5 ArrayExpress GSM1129439 LE 1 Cy5 P-GSE46341-6 ArrayExpress GSM1129439 A-GEOD-17060 ArrayExpress array assay P-GSE46341-7 ArrayExpress GSM1129439_140.89.525_Dp1_10.12.09.gpr ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.raw.1.zip P-GSE46341-1 ArrayExpress GSM1129439_sample_table.txt norm GSM1129439_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.processed.1.zip Stage D 8 day after breaker purple GSM1129439 2 140.89.525 Dp1 (10.12.09) common reference Feature Expression in purple tissue at 8 dpb, replicate 1 Solanum lycopersicum EFO http://purl.obolibrary.org/obo/NCBITaxon_4081 pooled total RNA P-GSE46341-2 ArrayExpress P-GSE46341-3 ArrayExpress P-GSE46341-4 ArrayExpress GSM1129439 extract 2 total RNA P-GSE46341-5 ArrayExpress GSM1129439 LE 2 Cy3 P-GSE46341-6 ArrayExpress GSM1129439 A-GEOD-17060 ArrayExpress array assay P-GSE46341-7 ArrayExpress GSM1129439_140.89.525_Dp1_10.12.09.gpr ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.raw.1.zip P-GSE46341-1 ArrayExpress GSM1129439_sample_table.txt norm GSM1129439_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.processed.1.zip not specified not specified not specified GSM1129438 2 140.89.524 Cr2 (10.12.09) common reference Feature Expression in Red tissue at 45 dpb, replicate 2 Solanum lycopersicum EFO http://purl.obolibrary.org/obo/NCBITaxon_4081 pooled total RNA P-GSE46341-2 ArrayExpress P-GSE46341-3 ArrayExpress P-GSE46341-4 ArrayExpress GSM1129438 extract 2 total RNA P-GSE46341-5 ArrayExpress GSM1129438 LE 2 Cy3 P-GSE46341-6 ArrayExpress GSM1129438 A-GEOD-17060 ArrayExpress array assay P-GSE46341-7 ArrayExpress GSM1129438_140.89.524_Cr2_10.12.09.gpr ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.raw.1.zip P-GSE46341-1 ArrayExpress GSM1129438_sample_table.txt norm GSM1129438_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.processed.1.zip not specified not specified not specified GSM1129438 1 140.89.524 Cr2 (10.12.09) Stage C_red tissue Feature Expression in Red tissue at 45 dpb, replicate 2 Stage C Del/Ros1 fruit in the MoneyMaker background F8DR Solanum lycopersicum EFO http://purl.obolibrary.org/obo/NCBITaxon_4081 red P-GSE46341-2 ArrayExpress P-GSE46341-3 ArrayExpress P-GSE46341-4 ArrayExpress GSM1129438 extract 1 total RNA P-GSE46341-5 ArrayExpress GSM1129438 LE 1 Cy5 P-GSE46341-6 ArrayExpress GSM1129438 A-GEOD-17060 ArrayExpress array assay P-GSE46341-7 ArrayExpress GSM1129438_140.89.524_Cr2_10.12.09.gpr ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.raw.1.zip P-GSE46341-1 ArrayExpress GSM1129438_sample_table.txt norm GSM1129438_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46341/E-GEOD-46341.processed.1.zip Stage C 45 day after breaker red