Source Name	Comment [Sample_description]	Comment [Sample_source_name]	Comment [Sample_title]	Characteristics [Organism]	Term Source REF	Term Accession Number	Characteristics [growth medium]	Characteristics [strain or line]	Characteristics [variation]	Protocol REF	Term Source REF	Protocol REF	Term Source REF	Extract Name	Material Type	Protocol REF	Term Source REF	Labeled Extract Name	Label	Protocol REF	Term Source REF	Assay Name	Array Design REF	Term Source REF	Technology Type	Protocol REF	Term Source REF	Protocol REF	Term Source REF	Array Data File	Comment [ArrayExpress FTP file]	Protocol REF	Term Source REF	Normalization Name	Derived Array Data File	Comment [Derived ArrayExpress FTP file]	FactorValue [GROWTH MEDIUM]	FactorValue [VARIATION]
GSM1111959 2	samples in Minimal media all1-B_vs_SM-B	RC2  yeast cells,  growth at 37C in MM	all1 mutant vs RC2-SM_5	Cryptococcus neoformans	EFO	http://purl.obolibrary.org/obo/NCBITaxon_5207	Minimal media	RC2-Serotype D	WT	P-GSE45688-2	ArrayExpress	P-GSE45688-3	ArrayExpress	GSM1111959 extract 2	total RNA	P-GSE45688-4	ArrayExpress	GSM1111959 LE 2	Cy5	P-GSE45688-5	ArrayExpress	GSM1111959	A-GEOD-15151	ArrayExpress	array assay	P-GSE45688-6	ArrayExpress	P-GSE45688-7	ArrayExpress	GSM1111959_Slide_139.gpr	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-45688/E-GEOD-45688.raw.1.zip	P-GSE45688-1	ArrayExpress	GSM1111959_sample_table.txt norm	GSM1111959_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-45688/E-GEOD-45688.processed.1.zip	Minimal media	WT
GSM1111959 1	samples in Minimal media all1-B_vs_SM-B	all1 mutant yeast cells,  growth at 37C in MM	all1 mutant vs RC2-SM_5	Cryptococcus neoformans	EFO	http://purl.obolibrary.org/obo/NCBITaxon_5207	Minimal media	RC2-Serotype D	all1 mutant	P-GSE45688-2	ArrayExpress	P-GSE45688-3	ArrayExpress	GSM1111959 extract 1	total RNA	P-GSE45688-4	ArrayExpress	GSM1111959 LE 1	Cy3	P-GSE45688-5	ArrayExpress	GSM1111959	A-GEOD-15151	ArrayExpress	array assay	P-GSE45688-6	ArrayExpress	P-GSE45688-7	ArrayExpress	GSM1111959_Slide_139.gpr	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-45688/E-GEOD-45688.raw.1.zip	P-GSE45688-1	ArrayExpress	GSM1111959_sample_table.txt norm	GSM1111959_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-45688/E-GEOD-45688.processed.1.zip	Minimal media	all1 mutant
GSM1111958 1	samples in Minimal media SM-A_vs_all1-A	RC2  yeast cells,  growth at 37C in MM	RC2-SM vs all1 mutant_4	Cryptococcus neoformans	EFO	http://purl.obolibrary.org/obo/NCBITaxon_5207	Minimal media	RC2-Serotype D	WT	P-GSE45688-2	ArrayExpress	P-GSE45688-3	ArrayExpress	GSM1111958 extract 1	total RNA	P-GSE45688-4	ArrayExpress	GSM1111958 LE 1	Cy3	P-GSE45688-5	ArrayExpress	GSM1111958	A-GEOD-15151	ArrayExpress	array assay	P-GSE45688-6	ArrayExpress	P-GSE45688-7	ArrayExpress	GSM1111958_Slide_138.gpr	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-45688/E-GEOD-45688.raw.1.zip	P-GSE45688-1	ArrayExpress	GSM1111958_sample_table.txt norm	GSM1111958_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-45688/E-GEOD-45688.processed.1.zip	Minimal media	WT
GSM1111958 2	samples in Minimal media SM-A_vs_all1-A	all1 mutant yeast cells,  growth at 37C in MM	RC2-SM vs all1 mutant_4	Cryptococcus neoformans	EFO	http://purl.obolibrary.org/obo/NCBITaxon_5207	Minimal media	RC2-Serotype D	all1 mutant	P-GSE45688-2	ArrayExpress	P-GSE45688-3	ArrayExpress	GSM1111958 extract 2	total RNA	P-GSE45688-4	ArrayExpress	GSM1111958 LE 2	Cy5	P-GSE45688-5	ArrayExpress	GSM1111958	A-GEOD-15151	ArrayExpress	array assay	P-GSE45688-6	ArrayExpress	P-GSE45688-7	ArrayExpress	GSM1111958_Slide_138.gpr	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-45688/E-GEOD-45688.raw.1.zip	P-GSE45688-1	ArrayExpress	GSM1111958_sample_table.txt norm	GSM1111958_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-45688/E-GEOD-45688.processed.1.zip	Minimal media	all1 mutant
GSM1111957 2	samples in YPD media SM-3_vs_all1-3	all1 mutant yeast cells,  growth at 37C in YPD	RC2-SM vs all1 mutant_3	Cryptococcus neoformans	EFO	http://purl.obolibrary.org/obo/NCBITaxon_5207	YPD	RC2-Serotype D	all1 mutant	P-GSE45688-2	ArrayExpress	P-GSE45688-3	ArrayExpress	GSM1111957 extract 2	total RNA	P-GSE45688-4	ArrayExpress	GSM1111957 LE 2	Cy5	P-GSE45688-5	ArrayExpress	GSM1111957	A-GEOD-15151	ArrayExpress	array assay	P-GSE45688-6	ArrayExpress	P-GSE45688-7	ArrayExpress	GSM1111957_Slide_117.gpr	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-45688/E-GEOD-45688.raw.1.zip	P-GSE45688-1	ArrayExpress	GSM1111957_sample_table.txt norm	GSM1111957_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-45688/E-GEOD-45688.processed.1.zip	YPD	all1 mutant
GSM1111957 1	samples in YPD media SM-3_vs_all1-3	RC2  yeast cells,  growth at 37C in YPD	RC2-SM vs all1 mutant_3	Cryptococcus neoformans	EFO	http://purl.obolibrary.org/obo/NCBITaxon_5207	YPD	RC2-Serotype D	WT	P-GSE45688-2	ArrayExpress	P-GSE45688-3	ArrayExpress	GSM1111957 extract 1	total RNA	P-GSE45688-4	ArrayExpress	GSM1111957 LE 1	Cy3	P-GSE45688-5	ArrayExpress	GSM1111957	A-GEOD-15151	ArrayExpress	array assay	P-GSE45688-6	ArrayExpress	P-GSE45688-7	ArrayExpress	GSM1111957_Slide_117.gpr	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-45688/E-GEOD-45688.raw.1.zip	P-GSE45688-1	ArrayExpress	GSM1111957_sample_table.txt norm	GSM1111957_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-45688/E-GEOD-45688.processed.1.zip	YPD	WT
GSM1111956 1	samples in YPD media all1-2_vs_SM-2	all1 mutant yeast cells,  growth at 37C in YPD	all1 mutant vs RC2-SM_2	Cryptococcus neoformans	EFO	http://purl.obolibrary.org/obo/NCBITaxon_5207	YPD	RC2-Serotype D	all1 mutant	P-GSE45688-2	ArrayExpress	P-GSE45688-3	ArrayExpress	GSM1111956 extract 1	total RNA	P-GSE45688-4	ArrayExpress	GSM1111956 LE 1	Cy3	P-GSE45688-5	ArrayExpress	GSM1111956	A-GEOD-15151	ArrayExpress	array assay	P-GSE45688-6	ArrayExpress	P-GSE45688-7	ArrayExpress	GSM1111956_Slide_116.gpr	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-45688/E-GEOD-45688.raw.1.zip	P-GSE45688-1	ArrayExpress	GSM1111956_sample_table.txt norm	GSM1111956_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-45688/E-GEOD-45688.processed.1.zip	YPD	all1 mutant
GSM1111956 2	samples in YPD media all1-2_vs_SM-2	RC2  yeast cells,  growth at 37C in YPD	all1 mutant vs RC2-SM_2	Cryptococcus neoformans	EFO	http://purl.obolibrary.org/obo/NCBITaxon_5207	YPD	RC2-Serotype D	WT	P-GSE45688-2	ArrayExpress	P-GSE45688-3	ArrayExpress	GSM1111956 extract 2	total RNA	P-GSE45688-4	ArrayExpress	GSM1111956 LE 2	Cy5	P-GSE45688-5	ArrayExpress	GSM1111956	A-GEOD-15151	ArrayExpress	array assay	P-GSE45688-6	ArrayExpress	P-GSE45688-7	ArrayExpress	GSM1111956_Slide_116.gpr	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-45688/E-GEOD-45688.raw.1.zip	P-GSE45688-1	ArrayExpress	GSM1111956_sample_table.txt norm	GSM1111956_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-45688/E-GEOD-45688.processed.1.zip	YPD	WT
GSM1111955 2	samples in YPD media SM-1_vs_all1-1	all1 mutant yeast cells,  growth at 37C in YPD	RC2-SM vs all1 mutant_1	Cryptococcus neoformans	EFO	http://purl.obolibrary.org/obo/NCBITaxon_5207	YPD	RC2-Serotype D	all1 mutant	P-GSE45688-2	ArrayExpress	P-GSE45688-3	ArrayExpress	GSM1111955 extract 2	total RNA	P-GSE45688-4	ArrayExpress	GSM1111955 LE 2	Cy5	P-GSE45688-5	ArrayExpress	GSM1111955	A-GEOD-15151	ArrayExpress	array assay	P-GSE45688-6	ArrayExpress	P-GSE45688-7	ArrayExpress	GSM1111955_Slide_115.gpr	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-45688/E-GEOD-45688.raw.1.zip	P-GSE45688-1	ArrayExpress	GSM1111955_sample_table.txt norm	GSM1111955_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-45688/E-GEOD-45688.processed.1.zip	YPD	all1 mutant
GSM1111955 1	samples in YPD media SM-1_vs_all1-1	RC2  yeast cells,  growth at 37C in YPD	RC2-SM vs all1 mutant_1	Cryptococcus neoformans	EFO	http://purl.obolibrary.org/obo/NCBITaxon_5207	YPD	RC2-Serotype D	WT	P-GSE45688-2	ArrayExpress	P-GSE45688-3	ArrayExpress	GSM1111955 extract 1	total RNA	P-GSE45688-4	ArrayExpress	GSM1111955 LE 1	Cy3	P-GSE45688-5	ArrayExpress	GSM1111955	A-GEOD-15151	ArrayExpress	array assay	P-GSE45688-6	ArrayExpress	P-GSE45688-7	ArrayExpress	GSM1111955_Slide_115.gpr	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-45688/E-GEOD-45688.raw.1.zip	P-GSE45688-1	ArrayExpress	GSM1111955_sample_table.txt norm	GSM1111955_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-45688/E-GEOD-45688.processed.1.zip	YPD	WT