Source Name Comment [Sample_description] Comment [Sample_source_name] Comment [Sample_title] Characteristics [age] Characteristics [background] Characteristics [condition] Characteristics [genotype] Characteristics [organism] Term Source REF Term Accession Number Characteristics [organism part] Protocol REF Term Source REF Protocol REF Term Source REF Protocol REF Term Source REF Extract Name Material Type Protocol REF Term Source REF Labeled Extract Name Label Protocol REF Term Source REF Assay Name Array Design REF Term Source REF Technology Type Protocol REF Term Source REF Array Data File Comment [ArrayExpress FTP file] Protocol REF Term Source REF Normalization Name Derived Array Data File Comment [Derived ArrayExpress FTP file] FactorValue [BACKGROUND] FactorValue [CONDITION] FactorValue [GENOTYPE] GSM1088449 1 10h2 Gene expression at heat shock condition (37�C for 1 hr). whole seedling of 7-day-old plants at 37�C for 1 hr, overexpression of HSFA2 in QK A2QK HS-2 7 days mixed (Col-0 and Ws) heat shock (37�C) overexpression of HSFA2 in QK (hsfa1 quadruple mutant) Arabidopsis thaliana EFO http://purl.obolibrary.org/obo/NCBITaxon_3702 whole seedling P-GSE44655-2 ArrayExpress P-GSE44655-3 ArrayExpress P-GSE44655-4 ArrayExpress GSM1088449 extract 1 total RNA P-GSE44655-5 ArrayExpress GSM1088449 LE 1 biotin P-GSE44655-6 ArrayExpress GSM1088449 A-AFFY-2 ArrayExpress array assay P-GSE44655-7 ArrayExpress GSM1088449_10h2.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-44655/E-GEOD-44655.raw.1.zip P-GSE44655-1 ArrayExpress GSM1088449_sample_table.txt norm GSM1088449_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-44655/E-GEOD-44655.processed.1.zip mixed (Col-0 and Ws) heat shock (37�C) overexpression of HSFA2 in QK (hsfa1 quadruple mutant) GSM1088448 1 10h1 Gene expression at heat shock condition (37�C for 1 hr). whole seedling of 7-day-old plants at 37�C for 1 hr, overexpression of HSFA2 in QK A2QK HS-1 7 days mixed (Col-0 and Ws) heat shock (37�C) overexpression of HSFA2 in QK (hsfa1 quadruple mutant) Arabidopsis thaliana EFO http://purl.obolibrary.org/obo/NCBITaxon_3702 whole seedling P-GSE44655-2 ArrayExpress P-GSE44655-3 ArrayExpress P-GSE44655-4 ArrayExpress GSM1088448 extract 1 total RNA P-GSE44655-5 ArrayExpress GSM1088448 LE 1 biotin P-GSE44655-6 ArrayExpress GSM1088448 A-AFFY-2 ArrayExpress array assay P-GSE44655-7 ArrayExpress GSM1088448_10h1.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-44655/E-GEOD-44655.raw.1.zip P-GSE44655-1 ArrayExpress GSM1088448_sample_table.txt norm GSM1088448_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-44655/E-GEOD-44655.processed.1.zip mixed (Col-0 and Ws) heat shock (37�C) overexpression of HSFA2 in QK (hsfa1 quadruple mutant) GSM1088447 1 qh2 Gene expression at heat shock condition (37�C for 1 hr). whole seedling of 7-day-old plants at 37�C for 1 hr, hsfa1 quadruple mutant (QK) QK HS-2 7 days mixed (Col-0 and Ws) heat shock (37�C) hsfa1 quadruple mutant (QK) Arabidopsis thaliana EFO http://purl.obolibrary.org/obo/NCBITaxon_3702 whole seedling P-GSE44655-2 ArrayExpress P-GSE44655-3 ArrayExpress P-GSE44655-4 ArrayExpress GSM1088447 extract 1 total RNA P-GSE44655-5 ArrayExpress GSM1088447 LE 1 biotin P-GSE44655-6 ArrayExpress GSM1088447 A-AFFY-2 ArrayExpress array assay P-GSE44655-7 ArrayExpress GSM1088447_qh2.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-44655/E-GEOD-44655.raw.1.zip P-GSE44655-1 ArrayExpress GSM1088447_sample_table.txt norm GSM1088447_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-44655/E-GEOD-44655.processed.1.zip mixed (Col-0 and Ws) heat shock (37�C) hsfa1 quadruple mutant (QK) GSM1088446 1 qh1 Gene expression at heat shock condition (37�C for 1 hr). whole seedling of 7-day-old plants at 37�C for 1 hr, hsfa1 quadruple mutant (QK) QK HS-1 7 days mixed (Col-0 and Ws) heat shock (37�C) hsfa1 quadruple mutant (QK) Arabidopsis thaliana EFO http://purl.obolibrary.org/obo/NCBITaxon_3702 whole seedling P-GSE44655-2 ArrayExpress P-GSE44655-3 ArrayExpress P-GSE44655-4 ArrayExpress GSM1088446 extract 1 total RNA P-GSE44655-5 ArrayExpress GSM1088446 LE 1 biotin P-GSE44655-6 ArrayExpress GSM1088446 A-AFFY-2 ArrayExpress array assay P-GSE44655-7 ArrayExpress GSM1088446_qh1.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-44655/E-GEOD-44655.raw.1.zip P-GSE44655-1 ArrayExpress GSM1088446_sample_table.txt norm GSM1088446_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-44655/E-GEOD-44655.processed.1.zip mixed (Col-0 and Ws) heat shock (37�C) hsfa1 quadruple mutant (QK) GSM1088445 1 a2h2 Gene expression at heat shock condition (37�C for 1 hr). whole seedling of 7-day-old plants at 37�C for 1 hr, hsfa2 KO mutant hsfa2 KO HS-2 7 days Col-0 heat shock (37�C) hsfa2 KO mutant Arabidopsis thaliana EFO http://purl.obolibrary.org/obo/NCBITaxon_3702 whole seedling P-GSE44655-2 ArrayExpress P-GSE44655-3 ArrayExpress P-GSE44655-4 ArrayExpress GSM1088445 extract 1 total RNA P-GSE44655-5 ArrayExpress GSM1088445 LE 1 biotin P-GSE44655-6 ArrayExpress GSM1088445 A-AFFY-2 ArrayExpress array assay P-GSE44655-7 ArrayExpress GSM1088445_a2h2.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-44655/E-GEOD-44655.raw.1.zip P-GSE44655-1 ArrayExpress GSM1088445_sample_table.txt norm GSM1088445_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-44655/E-GEOD-44655.processed.1.zip Col-0 heat shock (37�C) hsfa2 KO mutant GSM1088444 1 a2h1 Gene expression at heat shock condition (37�C for 1 hr). whole seedling of 7-day-old plants at 37�C for 1 hr, hsfa2 KO mutant hsfa2 KO HS-1 7 days Col-0 heat shock (37�C) hsfa2 KO mutant Arabidopsis thaliana EFO http://purl.obolibrary.org/obo/NCBITaxon_3702 whole seedling P-GSE44655-2 ArrayExpress P-GSE44655-3 ArrayExpress P-GSE44655-4 ArrayExpress GSM1088444 extract 1 total RNA P-GSE44655-5 ArrayExpress GSM1088444 LE 1 biotin P-GSE44655-6 ArrayExpress GSM1088444 A-AFFY-2 ArrayExpress array assay P-GSE44655-7 ArrayExpress GSM1088444_a2h1.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-44655/E-GEOD-44655.raw.1.zip P-GSE44655-1 ArrayExpress GSM1088444_sample_table.txt norm GSM1088444_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-44655/E-GEOD-44655.processed.1.zip Col-0 heat shock (37�C) hsfa2 KO mutant GSM1088443 1 ch2 Gene expression at heat shock condition (37�C for 1 hr). whole seedling of 7-day-old plants at 37�C for 1 hr, wild type Wild type (Col-0) HS-2 7 days Col-0 heat shock (37�C) wild type Arabidopsis thaliana EFO http://purl.obolibrary.org/obo/NCBITaxon_3702 whole seedling P-GSE44655-2 ArrayExpress P-GSE44655-3 ArrayExpress P-GSE44655-4 ArrayExpress GSM1088443 extract 1 total RNA P-GSE44655-5 ArrayExpress GSM1088443 LE 1 biotin P-GSE44655-6 ArrayExpress GSM1088443 A-AFFY-2 ArrayExpress array assay P-GSE44655-7 ArrayExpress GSM1088443_ch2.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-44655/E-GEOD-44655.raw.1.zip P-GSE44655-1 ArrayExpress GSM1088443_sample_table.txt norm GSM1088443_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-44655/E-GEOD-44655.processed.1.zip Col-0 heat shock (37�C) wild type GSM1088442 1 ch1 Gene expression at heat shock condition (37�C for 1 hr). whole seedling of 7-day-old plants at 37�C for 1 hr, wild type Wild type (Col-0) HS-1 7 days Col-0 heat shock (37�C) wild type Arabidopsis thaliana EFO http://purl.obolibrary.org/obo/NCBITaxon_3702 whole seedling P-GSE44655-2 ArrayExpress P-GSE44655-3 ArrayExpress P-GSE44655-4 ArrayExpress GSM1088442 extract 1 total RNA P-GSE44655-5 ArrayExpress GSM1088442 LE 1 biotin P-GSE44655-6 ArrayExpress GSM1088442 A-AFFY-2 ArrayExpress array assay P-GSE44655-7 ArrayExpress GSM1088442_ch1.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-44655/E-GEOD-44655.raw.1.zip P-GSE44655-1 ArrayExpress GSM1088442_sample_table.txt norm GSM1088442_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-44655/E-GEOD-44655.processed.1.zip Col-0 heat shock (37�C) wild type GSM1088441 1 10c2 Gene expression at control condition (22�C). whole seedling of 7-day-old plants at control condition, overexpression of HSFA2 in QK A2QK control-2 7 days mixed (Col-0 and Ws) control (22�C) overexpression of HSFA2 in QK (hsfa1 quadruple mutant) Arabidopsis thaliana EFO http://purl.obolibrary.org/obo/NCBITaxon_3702 whole seedling P-GSE44655-2 ArrayExpress P-GSE44655-3 ArrayExpress P-GSE44655-4 ArrayExpress GSM1088441 extract 1 total RNA P-GSE44655-5 ArrayExpress GSM1088441 LE 1 biotin P-GSE44655-6 ArrayExpress GSM1088441 A-AFFY-2 ArrayExpress array assay P-GSE44655-7 ArrayExpress GSM1088441_10c2.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-44655/E-GEOD-44655.raw.1.zip P-GSE44655-1 ArrayExpress GSM1088441_sample_table.txt norm GSM1088441_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-44655/E-GEOD-44655.processed.1.zip mixed (Col-0 and Ws) control (22�C) overexpression of HSFA2 in QK (hsfa1 quadruple mutant) GSM1088440 1 10c1 Gene expression at control condition (22�C). whole seedling of 7-day-old plants at control condition, overexpression of HSFA2 in QK A2QK control-1 7 days mixed (Col-0 and Ws) control (22�C) overexpression of HSFA2 in QK (hsfa1 quadruple mutant) Arabidopsis thaliana EFO http://purl.obolibrary.org/obo/NCBITaxon_3702 whole seedling P-GSE44655-2 ArrayExpress P-GSE44655-3 ArrayExpress P-GSE44655-4 ArrayExpress GSM1088440 extract 1 total RNA P-GSE44655-5 ArrayExpress GSM1088440 LE 1 biotin P-GSE44655-6 ArrayExpress GSM1088440 A-AFFY-2 ArrayExpress array assay P-GSE44655-7 ArrayExpress GSM1088440_10c1.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-44655/E-GEOD-44655.raw.1.zip P-GSE44655-1 ArrayExpress GSM1088440_sample_table.txt norm GSM1088440_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-44655/E-GEOD-44655.processed.1.zip mixed (Col-0 and Ws) control (22�C) overexpression of HSFA2 in QK (hsfa1 quadruple mutant) GSM1088439 1 qc2 Gene expression at control condition (22�C). whole seedling of 7-day-old plants at control condition, hsfa1 quadruple mutant (QK) QK control-2 7 days mixed (Col-0 and Ws) control (22�C) hsfa1 quadruple mutant (QK) Arabidopsis thaliana EFO http://purl.obolibrary.org/obo/NCBITaxon_3702 whole seedling P-GSE44655-2 ArrayExpress P-GSE44655-3 ArrayExpress P-GSE44655-4 ArrayExpress GSM1088439 extract 1 total RNA P-GSE44655-5 ArrayExpress GSM1088439 LE 1 biotin P-GSE44655-6 ArrayExpress GSM1088439 A-AFFY-2 ArrayExpress array assay P-GSE44655-7 ArrayExpress GSM1088439_qc2.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-44655/E-GEOD-44655.raw.1.zip P-GSE44655-1 ArrayExpress GSM1088439_sample_table.txt norm GSM1088439_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-44655/E-GEOD-44655.processed.1.zip mixed (Col-0 and Ws) control (22�C) hsfa1 quadruple mutant (QK) GSM1088438 1 qc1 Gene expression at control condition (22�C). whole seedling of 7-day-old plants at control condition, hsfa1 quadruple mutant (QK) QK control-1 7 days mixed (Col-0 and Ws) control (22�C) hsfa1 quadruple mutant (QK) Arabidopsis thaliana EFO http://purl.obolibrary.org/obo/NCBITaxon_3702 whole seedling P-GSE44655-2 ArrayExpress P-GSE44655-3 ArrayExpress P-GSE44655-4 ArrayExpress GSM1088438 extract 1 total RNA P-GSE44655-5 ArrayExpress GSM1088438 LE 1 biotin P-GSE44655-6 ArrayExpress GSM1088438 A-AFFY-2 ArrayExpress array assay P-GSE44655-7 ArrayExpress GSM1088438_qc1.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-44655/E-GEOD-44655.raw.1.zip P-GSE44655-1 ArrayExpress GSM1088438_sample_table.txt norm GSM1088438_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-44655/E-GEOD-44655.processed.1.zip mixed (Col-0 and Ws) control (22�C) hsfa1 quadruple mutant (QK) GSM1088437 1 a2c2 Gene expression at control condition (22�C). whole seedling of 7-day-old plants at control condition, hsfa2 KO mutant hsfa2 KO control-2 7 days Col-0 control (22�C) hsfa2 KO mutant Arabidopsis thaliana EFO http://purl.obolibrary.org/obo/NCBITaxon_3702 whole seedling P-GSE44655-2 ArrayExpress P-GSE44655-3 ArrayExpress P-GSE44655-4 ArrayExpress GSM1088437 extract 1 total RNA P-GSE44655-5 ArrayExpress GSM1088437 LE 1 biotin P-GSE44655-6 ArrayExpress GSM1088437 A-AFFY-2 ArrayExpress array assay P-GSE44655-7 ArrayExpress GSM1088437_a2c2.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-44655/E-GEOD-44655.raw.1.zip P-GSE44655-1 ArrayExpress GSM1088437_sample_table.txt norm GSM1088437_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-44655/E-GEOD-44655.processed.1.zip Col-0 control (22�C) hsfa2 KO mutant GSM1088436 1 a2c1 Gene expression at control condition (22�C). whole seedling of 7-day-old plants at control condition, hsfa2 KO mutant hsfa2 KO control-1 7 days Col-0 control (22�C) hsfa2 KO mutant Arabidopsis thaliana EFO http://purl.obolibrary.org/obo/NCBITaxon_3702 whole seedling P-GSE44655-2 ArrayExpress P-GSE44655-3 ArrayExpress P-GSE44655-4 ArrayExpress GSM1088436 extract 1 total RNA P-GSE44655-5 ArrayExpress GSM1088436 LE 1 biotin P-GSE44655-6 ArrayExpress GSM1088436 A-AFFY-2 ArrayExpress array assay P-GSE44655-7 ArrayExpress GSM1088436_a2c1.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-44655/E-GEOD-44655.raw.1.zip P-GSE44655-1 ArrayExpress GSM1088436_sample_table.txt norm GSM1088436_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-44655/E-GEOD-44655.processed.1.zip Col-0 control (22�C) hsfa2 KO mutant GSM1088435 1 cc2 Gene expression at control condition (22�C). whole seedling of 7-day-old plants at control condition, wild type Wild type (Col-0) control-2 7 days Col-0 control (22�C) wild type Arabidopsis thaliana EFO http://purl.obolibrary.org/obo/NCBITaxon_3702 whole seedling P-GSE44655-2 ArrayExpress P-GSE44655-3 ArrayExpress P-GSE44655-4 ArrayExpress GSM1088435 extract 1 total RNA P-GSE44655-5 ArrayExpress GSM1088435 LE 1 biotin P-GSE44655-6 ArrayExpress GSM1088435 A-AFFY-2 ArrayExpress array assay P-GSE44655-7 ArrayExpress GSM1088435_cc2.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-44655/E-GEOD-44655.raw.1.zip P-GSE44655-1 ArrayExpress GSM1088435_sample_table.txt norm GSM1088435_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-44655/E-GEOD-44655.processed.1.zip Col-0 control (22�C) wild type GSM1088434 1 cc1 Gene expression at control condition (22�C). whole seedling of 7-day-old plants at control condition, wild type Wild type (Col-0) control-1 7 days Col-0 control (22�C) wild type Arabidopsis thaliana EFO http://purl.obolibrary.org/obo/NCBITaxon_3702 whole seedling P-GSE44655-2 ArrayExpress P-GSE44655-3 ArrayExpress P-GSE44655-4 ArrayExpress GSM1088434 extract 1 total RNA P-GSE44655-5 ArrayExpress GSM1088434 LE 1 biotin P-GSE44655-6 ArrayExpress GSM1088434 A-AFFY-2 ArrayExpress array assay P-GSE44655-7 ArrayExpress GSM1088434_cc1.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-44655/E-GEOD-44655.raw.1.zip P-GSE44655-1 ArrayExpress GSM1088434_sample_table.txt norm GSM1088434_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-44655/E-GEOD-44655.processed.1.zip Col-0 control (22�C) wild type