Source Name	Comment [Sample_description]	Comment [Sample_source_name]	Comment [Sample_title]	Characteristics [Organism]	Term Source REF	Term Accession Number	Characteristics [cell line]	Characteristics [disease state]	Term Source REF	Term Accession Number	Characteristics [treatment protocol]	Protocol REF	Term Source REF	Protocol REF	Term Source REF	Protocol REF	Term Source REF	Extract Name	Material Type	Protocol REF	Term Source REF	Labeled Extract Name	Label	Protocol REF	Term Source REF	Assay Name	Array Design REF	Term Source REF	Technology Type	Protocol REF	Term Source REF	Protocol REF	Term Source REF	Array Data File	Comment [ArrayExpress FTP file]	Protocol REF	Term Source REF	Normalization Name	Derived Array Data File	Comment [Derived ArrayExpress FTP file]	FactorValue [TREATMENT PROTOCOL]
GSM1066173 1	HCT116 3 days hypoxia exp B.	HCT116	HCT116 3 days hypoxia exp B	Homo sapiens	EFO	http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606	HCT116 colon cancer cells	Colon Cancer	EFO	EFO_0000365	hypoxia	P-GSE43608-2	ArrayExpress	P-GSE43608-3	ArrayExpress	P-GSE43608-4	ArrayExpress	GSM1066173 extract 1	total RNA	P-GSE43608-5	ArrayExpress	GSM1066173 LE 1	biotin	P-GSE43608-6	ArrayExpress	GSM1066173	A-AFFY-44	ArrayExpress	array assay	P-GSE43608-7	ArrayExpress	P-GSE43608-8	ArrayExpress	GSM1066173_Onnis_H3B_1.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43608/E-GEOD-43608.raw.1.zip	P-GSE43608-1	ArrayExpress	GSM1066173_sample_table.txt norm	GSM1066173_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43608/E-GEOD-43608.processed.1.zip	hypoxia
GSM1066172 1	HCT116 3 days normoxia exp B.	HCT116	HCT116 3 days normoxia exp B	Homo sapiens	EFO	http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606	HCT116 colon cancer cells	Colon Cancer	EFO	EFO_0000365	normoxia	P-GSE43608-2	ArrayExpress	P-GSE43608-3	ArrayExpress	P-GSE43608-4	ArrayExpress	GSM1066172 extract 1	total RNA	P-GSE43608-5	ArrayExpress	GSM1066172 LE 1	biotin	P-GSE43608-6	ArrayExpress	GSM1066172	A-AFFY-44	ArrayExpress	array assay	P-GSE43608-7	ArrayExpress	P-GSE43608-8	ArrayExpress	GSM1066172_Onnis_N3B_1.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43608/E-GEOD-43608.raw.1.zip	P-GSE43608-1	ArrayExpress	GSM1066172_sample_table.txt norm	GSM1066172_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43608/E-GEOD-43608.processed.1.zip	normoxia
GSM1066171 1	HCT116 3 days hypoxia exp A.	HCT116	HCT116 3 days hypoxia exp A	Homo sapiens	EFO	http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606	HCT116 colon cancer cells	Colon Cancer	EFO	EFO_0000365	hypoxia	P-GSE43608-2	ArrayExpress	P-GSE43608-3	ArrayExpress	P-GSE43608-4	ArrayExpress	GSM1066171 extract 1	total RNA	P-GSE43608-5	ArrayExpress	GSM1066171 LE 1	biotin	P-GSE43608-6	ArrayExpress	GSM1066171	A-AFFY-44	ArrayExpress	array assay	P-GSE43608-7	ArrayExpress	P-GSE43608-8	ArrayExpress	GSM1066171_Onnis_H3A_1.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43608/E-GEOD-43608.raw.1.zip	P-GSE43608-1	ArrayExpress	GSM1066171_sample_table.txt norm	GSM1066171_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43608/E-GEOD-43608.processed.1.zip	hypoxia
GSM1066170 1	HCT116 3 days normoxia exp A.	HCT116	HCT116 3 days normoxia exp A	Homo sapiens	EFO	http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606	HCT116 colon cancer cells	Colon Cancer	EFO	EFO_0000365	normoxia	P-GSE43608-2	ArrayExpress	P-GSE43608-3	ArrayExpress	P-GSE43608-4	ArrayExpress	GSM1066170 extract 1	total RNA	P-GSE43608-5	ArrayExpress	GSM1066170 LE 1	biotin	P-GSE43608-6	ArrayExpress	GSM1066170	A-AFFY-44	ArrayExpress	array assay	P-GSE43608-7	ArrayExpress	P-GSE43608-8	ArrayExpress	GSM1066170_Onnis_N3A_1.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43608/E-GEOD-43608.raw.1.zip	P-GSE43608-1	ArrayExpress	GSM1066170_sample_table.txt norm	GSM1066170_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43608/E-GEOD-43608.processed.1.zip	normoxia