Source Name Comment [Sample_description] Comment [Sample_source_name] Comment [Sample_title] Characteristics [Organism] Term Source REF Term Accession Number Characteristics [Sex] Term Source REF Term Accession Number Characteristics [age] Characteristics [disease state] Term Source REF Term Accession Number Characteristics [haplogroup] Characteristics [organism part] Protocol REF Term Source REF Extract Name Material Type Protocol REF Term Source REF Labeled Extract Name Label Protocol REF Term Source REF Assay Name Array Design REF Term Source REF Technology Type Protocol REF Term Source REF Protocol REF Term Source REF Protocol REF Term Source REF Normalization Name Derived Array Data File Comment [Derived ArrayExpress FTP file] FactorValue [AGE] FactorValue [DISEASE STATE] Term Source REF Term Accession Number FactorValue [HAPLOGROUP] FactorValue [SEX] Term Source REF Term Accession Number GSM1059794 1 osteoarthritic cartilage knee sample cartilage knee cartilage knee 08379_OA Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 female EFO EFO_0001265 >60 years osteoarthritis EFO EFO_0002506 H knee cartilage P-GSE43269-42 ArrayExpress GSM1059794 extract 1 genomic DNA P-GSE43269-43 ArrayExpress GSM1059794 LE 1 Cy5 and Cy3 P-GSE43269-44 ArrayExpress GSM1059794 A-GEOD-8490 ArrayExpress array assay P-GSE43269-45 ArrayExpress P-GSE43269-46 ArrayExpress P-GSE43269-41 ArrayExpress GSM1059794_sample_table.txt norm GSM1059794_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43269/E-GEOD-43269.processed.1.zip >60 years osteoarthritis EFO EFO_0002506 H female EFO EFO_0001265 GSM1059793 1 osteoarthritic cartilage knee sample cartilage knee cartilage knee 08468_OA Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 female EFO EFO_0001265 >60 years osteoarthritis EFO EFO_0002506 U knee cartilage P-GSE43269-42 ArrayExpress GSM1059793 extract 1 genomic DNA P-GSE43269-43 ArrayExpress GSM1059793 LE 1 Cy5 and Cy3 P-GSE43269-44 ArrayExpress GSM1059793 A-GEOD-8490 ArrayExpress array assay P-GSE43269-45 ArrayExpress P-GSE43269-46 ArrayExpress P-GSE43269-40 ArrayExpress GSM1059793_sample_table.txt norm GSM1059793_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43269/E-GEOD-43269.processed.1.zip >60 years osteoarthritis EFO EFO_0002506 U female EFO EFO_0001265 GSM1059792 1 osteoarthritic cartilage knee sample cartilage knee cartilage knee 08509_OA Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 female EFO EFO_0001265 >60 years osteoarthritis EFO EFO_0002506 U knee cartilage P-GSE43269-42 ArrayExpress GSM1059792 extract 1 genomic DNA P-GSE43269-43 ArrayExpress GSM1059792 LE 1 Cy5 and Cy3 P-GSE43269-44 ArrayExpress GSM1059792 A-GEOD-8490 ArrayExpress array assay P-GSE43269-45 ArrayExpress P-GSE43269-46 ArrayExpress P-GSE43269-39 ArrayExpress GSM1059792_sample_table.txt norm GSM1059792_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43269/E-GEOD-43269.processed.1.zip >60 years osteoarthritis EFO EFO_0002506 U female EFO EFO_0001265 GSM1059791 1 osteoarthritic cartilage knee sample cartilage knee cartilage knee 08776_OA Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 female EFO EFO_0001265 >60 years osteoarthritis EFO EFO_0002506 H knee cartilage P-GSE43269-42 ArrayExpress GSM1059791 extract 1 genomic DNA P-GSE43269-43 ArrayExpress GSM1059791 LE 1 Cy5 and Cy3 P-GSE43269-44 ArrayExpress GSM1059791 A-GEOD-8490 ArrayExpress array assay P-GSE43269-45 ArrayExpress P-GSE43269-46 ArrayExpress P-GSE43269-38 ArrayExpress GSM1059791_sample_table.txt norm GSM1059791_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43269/E-GEOD-43269.processed.1.zip >60 years osteoarthritis EFO EFO_0002506 H female EFO EFO_0001265 GSM1059790 1 osteoarthritic cartilage knee sample cartilage knee cartilage knee 08482_OA Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 female EFO EFO_0001265 >60 years osteoarthritis EFO EFO_0002506 H knee cartilage P-GSE43269-42 ArrayExpress GSM1059790 extract 1 genomic DNA P-GSE43269-43 ArrayExpress GSM1059790 LE 1 Cy5 and Cy3 P-GSE43269-44 ArrayExpress GSM1059790 A-GEOD-8490 ArrayExpress array assay P-GSE43269-45 ArrayExpress P-GSE43269-46 ArrayExpress P-GSE43269-37 ArrayExpress GSM1059790_sample_table.txt norm GSM1059790_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43269/E-GEOD-43269.processed.1.zip >60 years osteoarthritis EFO EFO_0002506 H female EFO EFO_0001265 GSM1059789 1 osteoarthritic cartilage knee sample cartilage knee cartilage knee 08769_OA Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 female EFO EFO_0001265 >60 years osteoarthritis EFO EFO_0002506 H knee cartilage P-GSE43269-42 ArrayExpress GSM1059789 extract 1 genomic DNA P-GSE43269-43 ArrayExpress GSM1059789 LE 1 Cy5 and Cy3 P-GSE43269-44 ArrayExpress GSM1059789 A-GEOD-8490 ArrayExpress array assay P-GSE43269-45 ArrayExpress P-GSE43269-46 ArrayExpress P-GSE43269-36 ArrayExpress GSM1059789_sample_table.txt norm GSM1059789_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43269/E-GEOD-43269.processed.1.zip >60 years osteoarthritis EFO EFO_0002506 H female EFO EFO_0001265 GSM1059788 1 osteoarthritic cartilage knee sample cartilage knee cartilage knee 08763_OA Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 female EFO EFO_0001265 >60 years osteoarthritis EFO EFO_0002506 H knee cartilage P-GSE43269-42 ArrayExpress GSM1059788 extract 1 genomic DNA P-GSE43269-43 ArrayExpress GSM1059788 LE 1 Cy5 and Cy3 P-GSE43269-44 ArrayExpress GSM1059788 A-GEOD-8490 ArrayExpress array assay P-GSE43269-45 ArrayExpress P-GSE43269-46 ArrayExpress P-GSE43269-35 ArrayExpress GSM1059788_sample_table.txt norm GSM1059788_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43269/E-GEOD-43269.processed.1.zip >60 years osteoarthritis EFO EFO_0002506 H female EFO EFO_0001265 GSM1059787 1 osteoarthritic cartilage knee sample cartilage knee cartilage knee 08451_OA Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 male EFO EFO_0001266 >60 years osteoarthritis EFO EFO_0002506 H knee cartilage P-GSE43269-42 ArrayExpress GSM1059787 extract 1 genomic DNA P-GSE43269-43 ArrayExpress GSM1059787 LE 1 Cy5 and Cy3 P-GSE43269-44 ArrayExpress GSM1059787 A-GEOD-8490 ArrayExpress array assay P-GSE43269-45 ArrayExpress P-GSE43269-46 ArrayExpress P-GSE43269-34 ArrayExpress GSM1059787_sample_table.txt norm GSM1059787_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43269/E-GEOD-43269.processed.1.zip >60 years osteoarthritis EFO EFO_0002506 H male EFO EFO_0001266 GSM1059786 1 normal cartilage knee sample cartilage knee cartilage knee 08791_N Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 female EFO EFO_0001265 <50 years normal EFO EFO_0000761 U knee cartilage P-GSE43269-42 ArrayExpress GSM1059786 extract 1 genomic DNA P-GSE43269-43 ArrayExpress GSM1059786 LE 1 Cy5 and Cy3 P-GSE43269-44 ArrayExpress GSM1059786 A-GEOD-8490 ArrayExpress array assay P-GSE43269-45 ArrayExpress P-GSE43269-46 ArrayExpress P-GSE43269-33 ArrayExpress GSM1059786_sample_table.txt norm GSM1059786_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43269/E-GEOD-43269.processed.1.zip <50 years normal EFO EFO_0000761 U female EFO EFO_0001265 GSM1059785 1 osteoarthritic cartilage knee sample cartilage knee cartilage knee 08768_OA Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 female EFO EFO_0001265 >60 years osteoarthritis EFO EFO_0002506 U knee cartilage P-GSE43269-42 ArrayExpress GSM1059785 extract 1 genomic DNA P-GSE43269-43 ArrayExpress GSM1059785 LE 1 Cy5 and Cy3 P-GSE43269-44 ArrayExpress GSM1059785 A-GEOD-8490 ArrayExpress array assay P-GSE43269-45 ArrayExpress P-GSE43269-46 ArrayExpress P-GSE43269-32 ArrayExpress GSM1059785_sample_table.txt norm GSM1059785_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43269/E-GEOD-43269.processed.1.zip >60 years osteoarthritis EFO EFO_0002506 U female EFO EFO_0001265 GSM1059784 1 normal cartilage knee sample cartilage knee cartilage knee 08102_N Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 male EFO EFO_0001266 >60 years normal EFO EFO_0000761 U knee cartilage P-GSE43269-42 ArrayExpress GSM1059784 extract 1 genomic DNA P-GSE43269-43 ArrayExpress GSM1059784 LE 1 Cy5 and Cy3 P-GSE43269-44 ArrayExpress GSM1059784 A-GEOD-8490 ArrayExpress array assay P-GSE43269-45 ArrayExpress P-GSE43269-46 ArrayExpress P-GSE43269-31 ArrayExpress GSM1059784_sample_table.txt norm GSM1059784_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43269/E-GEOD-43269.processed.1.zip >60 years normal EFO EFO_0000761 U male EFO EFO_0001266 GSM1059783 1 normal cartilage knee sample cartilage knee cartilage knee 08664_N Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 male EFO EFO_0001266 <50 years normal EFO EFO_0000761 H knee cartilage P-GSE43269-42 ArrayExpress GSM1059783 extract 1 genomic DNA P-GSE43269-43 ArrayExpress GSM1059783 LE 1 Cy5 and Cy3 P-GSE43269-44 ArrayExpress GSM1059783 A-GEOD-8490 ArrayExpress array assay P-GSE43269-45 ArrayExpress P-GSE43269-46 ArrayExpress P-GSE43269-30 ArrayExpress GSM1059783_sample_table.txt norm GSM1059783_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43269/E-GEOD-43269.processed.1.zip <50 years normal EFO EFO_0000761 H male EFO EFO_0001266 GSM1059782 1 normal cartilage knee sample cartilage knee cartilage knee 08381_N Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 male EFO EFO_0001266 >60 years normal EFO EFO_0000761 H knee cartilage P-GSE43269-42 ArrayExpress GSM1059782 extract 1 genomic DNA P-GSE43269-43 ArrayExpress GSM1059782 LE 1 Cy5 and Cy3 P-GSE43269-44 ArrayExpress GSM1059782 A-GEOD-8490 ArrayExpress array assay P-GSE43269-45 ArrayExpress P-GSE43269-46 ArrayExpress P-GSE43269-29 ArrayExpress GSM1059782_sample_table.txt norm GSM1059782_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43269/E-GEOD-43269.processed.1.zip >60 years normal EFO EFO_0000761 H male EFO EFO_0001266 GSM1059781 1 osteoarthritic cartilage knee sample cartilage knee cartilage knee 08750_OA Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 male EFO EFO_0001266 >60 years osteoarthritis EFO EFO_0002506 H knee cartilage P-GSE43269-42 ArrayExpress GSM1059781 extract 1 genomic DNA P-GSE43269-43 ArrayExpress GSM1059781 LE 1 Cy5 and Cy3 P-GSE43269-44 ArrayExpress GSM1059781 A-GEOD-8490 ArrayExpress array assay P-GSE43269-45 ArrayExpress P-GSE43269-46 ArrayExpress P-GSE43269-28 ArrayExpress GSM1059781_sample_table.txt norm GSM1059781_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43269/E-GEOD-43269.processed.1.zip >60 years osteoarthritis EFO EFO_0002506 H male EFO EFO_0001266 GSM1059780 1 osteoarthritic cartilage knee sample cartilage knee cartilage knee 08121_OA Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 female EFO EFO_0001265 >60 years osteoarthritis EFO EFO_0002506 J knee cartilage P-GSE43269-42 ArrayExpress GSM1059780 extract 1 genomic DNA P-GSE43269-43 ArrayExpress GSM1059780 LE 1 Cy5 and Cy3 P-GSE43269-44 ArrayExpress GSM1059780 A-GEOD-8490 ArrayExpress array assay P-GSE43269-45 ArrayExpress P-GSE43269-46 ArrayExpress P-GSE43269-27 ArrayExpress GSM1059780_sample_table.txt norm GSM1059780_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43269/E-GEOD-43269.processed.1.zip >60 years osteoarthritis EFO EFO_0002506 J female EFO EFO_0001265 GSM1059779 1 normal cartilage knee sample cartilage knee cartilage knee 08488_N Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 female EFO EFO_0001265 <50 years normal EFO EFO_0000761 H knee cartilage P-GSE43269-42 ArrayExpress GSM1059779 extract 1 genomic DNA P-GSE43269-43 ArrayExpress GSM1059779 LE 1 Cy5 and Cy3 P-GSE43269-44 ArrayExpress GSM1059779 A-GEOD-8490 ArrayExpress array assay P-GSE43269-45 ArrayExpress P-GSE43269-46 ArrayExpress P-GSE43269-26 ArrayExpress GSM1059779_sample_table.txt norm GSM1059779_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43269/E-GEOD-43269.processed.1.zip <50 years normal EFO EFO_0000761 H female EFO EFO_0001265 GSM1059778 1 normal cartilage knee sample cartilage knee cartilage knee 08283_N Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 female EFO EFO_0001265 <50 years normal EFO EFO_0000761 H knee cartilage P-GSE43269-42 ArrayExpress GSM1059778 extract 1 genomic DNA P-GSE43269-43 ArrayExpress GSM1059778 LE 1 Cy5 and Cy3 P-GSE43269-44 ArrayExpress GSM1059778 A-GEOD-8490 ArrayExpress array assay P-GSE43269-45 ArrayExpress P-GSE43269-46 ArrayExpress P-GSE43269-25 ArrayExpress GSM1059778_sample_table.txt norm GSM1059778_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43269/E-GEOD-43269.processed.1.zip <50 years normal EFO EFO_0000761 H female EFO EFO_0001265 GSM1059777 1 normal cartilage knee sample cartilage knee cartilage knee 08449_N Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 female EFO EFO_0001265 <50 years normal EFO EFO_0000761 U knee cartilage P-GSE43269-42 ArrayExpress GSM1059777 extract 1 genomic DNA P-GSE43269-43 ArrayExpress GSM1059777 LE 1 Cy5 and Cy3 P-GSE43269-44 ArrayExpress GSM1059777 A-GEOD-8490 ArrayExpress array assay P-GSE43269-45 ArrayExpress P-GSE43269-46 ArrayExpress P-GSE43269-24 ArrayExpress GSM1059777_sample_table.txt norm GSM1059777_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43269/E-GEOD-43269.processed.1.zip <50 years normal EFO EFO_0000761 U female EFO EFO_0001265 GSM1059776 1 osteoarthritic cartilage knee sample cartilage knee cartilage knee 08101_OA Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 female EFO EFO_0001265 >60 years osteoarthritis EFO EFO_0002506 H knee cartilage P-GSE43269-42 ArrayExpress GSM1059776 extract 1 genomic DNA P-GSE43269-43 ArrayExpress GSM1059776 LE 1 Cy5 and Cy3 P-GSE43269-44 ArrayExpress GSM1059776 A-GEOD-8490 ArrayExpress array assay P-GSE43269-45 ArrayExpress P-GSE43269-46 ArrayExpress P-GSE43269-23 ArrayExpress GSM1059776_sample_table.txt norm GSM1059776_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43269/E-GEOD-43269.processed.1.zip >60 years osteoarthritis EFO EFO_0002506 H female EFO EFO_0001265 GSM1059775 1 osteoarthritic cartilage knee sample cartilage knee cartilage knee 08260_OA Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 male EFO EFO_0001266 >60 years osteoarthritis EFO EFO_0002506 U knee cartilage P-GSE43269-42 ArrayExpress GSM1059775 extract 1 genomic DNA P-GSE43269-43 ArrayExpress GSM1059775 LE 1 Cy5 and Cy3 P-GSE43269-44 ArrayExpress GSM1059775 A-GEOD-8490 ArrayExpress array assay P-GSE43269-45 ArrayExpress P-GSE43269-46 ArrayExpress P-GSE43269-22 ArrayExpress GSM1059775_sample_table.txt norm GSM1059775_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43269/E-GEOD-43269.processed.1.zip >60 years osteoarthritis EFO EFO_0002506 U male EFO EFO_0001266 GSM1059774 1 osteoarthritic cartilage knee sample cartilage knee cartilage knee 08200_OA Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 male EFO EFO_0001266 >60 years osteoarthritis EFO EFO_0002506 U knee cartilage P-GSE43269-42 ArrayExpress GSM1059774 extract 1 genomic DNA P-GSE43269-43 ArrayExpress GSM1059774 LE 1 Cy5 and Cy3 P-GSE43269-44 ArrayExpress GSM1059774 A-GEOD-8490 ArrayExpress array assay P-GSE43269-45 ArrayExpress P-GSE43269-46 ArrayExpress P-GSE43269-21 ArrayExpress GSM1059774_sample_table.txt norm GSM1059774_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43269/E-GEOD-43269.processed.1.zip >60 years osteoarthritis EFO EFO_0002506 U male EFO EFO_0001266 GSM1059773 1 normal cartilage knee sample cartilage knee cartilage knee 0825_N Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 male EFO EFO_0001266 <50 years normal EFO EFO_0000761 H knee cartilage P-GSE43269-42 ArrayExpress GSM1059773 extract 1 genomic DNA P-GSE43269-43 ArrayExpress GSM1059773 LE 1 Cy5 and Cy3 P-GSE43269-44 ArrayExpress GSM1059773 A-GEOD-8490 ArrayExpress array assay P-GSE43269-45 ArrayExpress P-GSE43269-46 ArrayExpress P-GSE43269-20 ArrayExpress GSM1059773_sample_table.txt norm GSM1059773_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43269/E-GEOD-43269.processed.1.zip <50 years normal EFO EFO_0000761 H male EFO EFO_0001266 GSM1059772 1 normal cartilage knee sample cartilage knee cartilage knee 051337_N Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 male EFO EFO_0001266 >50 years normal EFO EFO_0000761 J knee cartilage P-GSE43269-42 ArrayExpress GSM1059772 extract 1 genomic DNA P-GSE43269-43 ArrayExpress GSM1059772 LE 1 Cy5 and Cy3 P-GSE43269-44 ArrayExpress GSM1059772 A-GEOD-8490 ArrayExpress array assay P-GSE43269-45 ArrayExpress P-GSE43269-46 ArrayExpress P-GSE43269-19 ArrayExpress GSM1059772_sample_table.txt norm GSM1059772_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43269/E-GEOD-43269.processed.1.zip >50 years normal EFO EFO_0000761 J male EFO EFO_0001266 GSM1059771 1 osteoarthritic cartilage knee sample cartilage knee cartilage knee 08493_OA Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 female EFO EFO_0001265 >60 years osteoarthritis EFO EFO_0002506 J knee cartilage P-GSE43269-42 ArrayExpress GSM1059771 extract 1 genomic DNA P-GSE43269-43 ArrayExpress GSM1059771 LE 1 Cy5 and Cy3 P-GSE43269-44 ArrayExpress GSM1059771 A-GEOD-8490 ArrayExpress array assay P-GSE43269-45 ArrayExpress P-GSE43269-46 ArrayExpress P-GSE43269-18 ArrayExpress GSM1059771_sample_table.txt norm GSM1059771_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43269/E-GEOD-43269.processed.1.zip >60 years osteoarthritis EFO EFO_0002506 J female EFO EFO_0001265 GSM1059770 1 normal cartilage knee sample cartilage knee cartilage knee 08480_N Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 male EFO EFO_0001266 >50 years normal EFO EFO_0000761 H knee cartilage P-GSE43269-42 ArrayExpress GSM1059770 extract 1 genomic DNA P-GSE43269-43 ArrayExpress GSM1059770 LE 1 Cy5 and Cy3 P-GSE43269-44 ArrayExpress GSM1059770 A-GEOD-8490 ArrayExpress array assay P-GSE43269-45 ArrayExpress P-GSE43269-46 ArrayExpress P-GSE43269-17 ArrayExpress GSM1059770_sample_table.txt norm GSM1059770_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43269/E-GEOD-43269.processed.1.zip >50 years normal EFO EFO_0000761 H male EFO EFO_0001266 GSM1059769 1 normal cartilage knee sample cartilage knee cartilage knee 061198_N Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 male EFO EFO_0001266 >50 years normal EFO EFO_0000761 J knee cartilage P-GSE43269-42 ArrayExpress GSM1059769 extract 1 genomic DNA P-GSE43269-43 ArrayExpress GSM1059769 LE 1 Cy5 and Cy3 P-GSE43269-44 ArrayExpress GSM1059769 A-GEOD-8490 ArrayExpress array assay P-GSE43269-45 ArrayExpress P-GSE43269-46 ArrayExpress P-GSE43269-16 ArrayExpress GSM1059769_sample_table.txt norm GSM1059769_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43269/E-GEOD-43269.processed.1.zip >50 years normal EFO EFO_0000761 J male EFO EFO_0001266 GSM1059768 1 osteoarthritic cartilage knee sample cartilage knee cartilage knee 08223_OA Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 female EFO EFO_0001265 >60 years osteoarthritis EFO EFO_0002506 J knee cartilage P-GSE43269-42 ArrayExpress GSM1059768 extract 1 genomic DNA P-GSE43269-43 ArrayExpress GSM1059768 LE 1 Cy5 and Cy3 P-GSE43269-44 ArrayExpress GSM1059768 A-GEOD-8490 ArrayExpress array assay P-GSE43269-45 ArrayExpress P-GSE43269-46 ArrayExpress P-GSE43269-15 ArrayExpress GSM1059768_sample_table.txt norm GSM1059768_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43269/E-GEOD-43269.processed.1.zip >60 years osteoarthritis EFO EFO_0002506 J female EFO EFO_0001265 GSM1059767 1 osteoarthritic cartilage knee sample cartilage knee cartilage knee 08288_OA Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 female EFO EFO_0001265 >60 years osteoarthritis EFO EFO_0002506 J knee cartilage P-GSE43269-42 ArrayExpress GSM1059767 extract 1 genomic DNA P-GSE43269-43 ArrayExpress GSM1059767 LE 1 Cy5 and Cy3 P-GSE43269-44 ArrayExpress GSM1059767 A-GEOD-8490 ArrayExpress array assay P-GSE43269-45 ArrayExpress P-GSE43269-46 ArrayExpress P-GSE43269-14 ArrayExpress GSM1059767_sample_table.txt norm GSM1059767_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43269/E-GEOD-43269.processed.1.zip >60 years osteoarthritis EFO EFO_0002506 J female EFO EFO_0001265 GSM1059766 1 normal cartilage knee sample cartilage knee cartilage knee 051255_N Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 female EFO EFO_0001265 >50 years normal EFO EFO_0000761 J knee cartilage P-GSE43269-42 ArrayExpress GSM1059766 extract 1 genomic DNA P-GSE43269-43 ArrayExpress GSM1059766 LE 1 Cy5 and Cy3 P-GSE43269-44 ArrayExpress GSM1059766 A-GEOD-8490 ArrayExpress array assay P-GSE43269-45 ArrayExpress P-GSE43269-46 ArrayExpress P-GSE43269-13 ArrayExpress GSM1059766_sample_table.txt norm GSM1059766_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43269/E-GEOD-43269.processed.1.zip >50 years normal EFO EFO_0000761 J female EFO EFO_0001265 GSM1059765 1 normal cartilage knee sample cartilage knee cartilage knee 07636_N Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 male EFO EFO_0001266 >50 years normal EFO EFO_0000761 J knee cartilage P-GSE43269-42 ArrayExpress GSM1059765 extract 1 genomic DNA P-GSE43269-43 ArrayExpress GSM1059765 LE 1 Cy5 and Cy3 P-GSE43269-44 ArrayExpress GSM1059765 A-GEOD-8490 ArrayExpress array assay P-GSE43269-45 ArrayExpress P-GSE43269-46 ArrayExpress P-GSE43269-12 ArrayExpress GSM1059765_sample_table.txt norm GSM1059765_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43269/E-GEOD-43269.processed.1.zip >50 years normal EFO EFO_0000761 J male EFO EFO_0001266 GSM1059764 1 normal cartilage knee sample cartilage knee cartilage knee 08454_N Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 male EFO EFO_0001266 >60 years normal EFO EFO_0000761 H knee cartilage P-GSE43269-42 ArrayExpress GSM1059764 extract 1 genomic DNA P-GSE43269-43 ArrayExpress GSM1059764 LE 1 Cy5 and Cy3 P-GSE43269-44 ArrayExpress GSM1059764 A-GEOD-8490 ArrayExpress array assay P-GSE43269-45 ArrayExpress P-GSE43269-46 ArrayExpress P-GSE43269-11 ArrayExpress GSM1059764_sample_table.txt norm GSM1059764_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43269/E-GEOD-43269.processed.1.zip >60 years normal EFO EFO_0000761 H male EFO EFO_0001266 GSM1059763 1 osteoarthritic cartilage knee sample cartilage knee cartilage knee 08435_OA Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 male EFO EFO_0001266 >60 years osteoarthritis EFO EFO_0002506 H knee cartilage P-GSE43269-42 ArrayExpress GSM1059763 extract 1 genomic DNA P-GSE43269-43 ArrayExpress GSM1059763 LE 1 Cy5 and Cy3 P-GSE43269-44 ArrayExpress GSM1059763 A-GEOD-8490 ArrayExpress array assay P-GSE43269-45 ArrayExpress P-GSE43269-46 ArrayExpress P-GSE43269-10 ArrayExpress GSM1059763_sample_table.txt norm GSM1059763_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43269/E-GEOD-43269.processed.1.zip >60 years osteoarthritis EFO EFO_0002506 H male EFO EFO_0001266 GSM1059762 1 osteoarthritic cartilage knee sample cartilage knee cartilage knee 08426_OA Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 male EFO EFO_0001266 >60 years osteoarthritis EFO EFO_0002506 H knee cartilage P-GSE43269-42 ArrayExpress GSM1059762 extract 1 genomic DNA P-GSE43269-43 ArrayExpress GSM1059762 LE 1 Cy5 and Cy3 P-GSE43269-44 ArrayExpress GSM1059762 A-GEOD-8490 ArrayExpress array assay P-GSE43269-45 ArrayExpress P-GSE43269-46 ArrayExpress P-GSE43269-9 ArrayExpress GSM1059762_sample_table.txt norm GSM1059762_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43269/E-GEOD-43269.processed.1.zip >60 years osteoarthritis EFO EFO_0002506 H male EFO EFO_0001266 GSM1059761 1 normal cartilage knee sample cartilage knee cartilage knee 08914_N Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 male EFO EFO_0001266 >60 years normal EFO EFO_0000761 J knee cartilage P-GSE43269-42 ArrayExpress GSM1059761 extract 1 genomic DNA P-GSE43269-43 ArrayExpress GSM1059761 LE 1 Cy5 and Cy3 P-GSE43269-44 ArrayExpress GSM1059761 A-GEOD-8490 ArrayExpress array assay P-GSE43269-45 ArrayExpress P-GSE43269-46 ArrayExpress P-GSE43269-8 ArrayExpress GSM1059761_sample_table.txt norm GSM1059761_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43269/E-GEOD-43269.processed.1.zip >60 years normal EFO EFO_0000761 J male EFO EFO_0001266 GSM1059760 1 osteoarthritic cartilage knee sample cartilage knee cartilage knee 08124_OA Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 male EFO EFO_0001266 >60 years osteoarthritis EFO EFO_0002506 H knee cartilage P-GSE43269-42 ArrayExpress GSM1059760 extract 1 genomic DNA P-GSE43269-43 ArrayExpress GSM1059760 LE 1 Cy5 and Cy3 P-GSE43269-44 ArrayExpress GSM1059760 A-GEOD-8490 ArrayExpress array assay P-GSE43269-45 ArrayExpress P-GSE43269-46 ArrayExpress P-GSE43269-7 ArrayExpress GSM1059760_sample_table.txt norm GSM1059760_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43269/E-GEOD-43269.processed.1.zip >60 years osteoarthritis EFO EFO_0002506 H male EFO EFO_0001266 GSM1059759 1 normal cartilage knee sample cartilage knee cartilage knee 08722_N Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 female EFO EFO_0001265 >60 years normal EFO EFO_0000761 H knee cartilage P-GSE43269-42 ArrayExpress GSM1059759 extract 1 genomic DNA P-GSE43269-43 ArrayExpress GSM1059759 LE 1 Cy5 and Cy3 P-GSE43269-44 ArrayExpress GSM1059759 A-GEOD-8490 ArrayExpress array assay P-GSE43269-45 ArrayExpress P-GSE43269-46 ArrayExpress P-GSE43269-6 ArrayExpress GSM1059759_sample_table.txt norm GSM1059759_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43269/E-GEOD-43269.processed.1.zip >60 years normal EFO EFO_0000761 H female EFO EFO_0001265 GSM1059758 1 normal cartilage knee sample cartilage knee cartilage knee 0853_N Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 male EFO EFO_0001266 >50 years normal EFO EFO_0000761 J knee cartilage P-GSE43269-42 ArrayExpress GSM1059758 extract 1 genomic DNA P-GSE43269-43 ArrayExpress GSM1059758 LE 1 Cy5 and Cy3 P-GSE43269-44 ArrayExpress GSM1059758 A-GEOD-8490 ArrayExpress array assay P-GSE43269-45 ArrayExpress P-GSE43269-46 ArrayExpress P-GSE43269-5 ArrayExpress GSM1059758_sample_table.txt norm GSM1059758_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43269/E-GEOD-43269.processed.1.zip >50 years normal EFO EFO_0000761 J male EFO EFO_0001266 GSM1059757 1 osteoarthritic cartilage knee sample cartilage knee cartilage knee 08802_OA Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 male EFO EFO_0001266 >60 years osteoarthritis EFO EFO_0002506 J knee cartilage P-GSE43269-42 ArrayExpress GSM1059757 extract 1 genomic DNA P-GSE43269-43 ArrayExpress GSM1059757 LE 1 Cy5 and Cy3 P-GSE43269-44 ArrayExpress GSM1059757 A-GEOD-8490 ArrayExpress array assay P-GSE43269-45 ArrayExpress P-GSE43269-46 ArrayExpress P-GSE43269-4 ArrayExpress GSM1059757_sample_table.txt norm GSM1059757_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43269/E-GEOD-43269.processed.1.zip >60 years osteoarthritis EFO EFO_0002506 J male EFO EFO_0001266 GSM1059756 1 normal cartilage knee sample cartilage knee cartilage knee 08137_N Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 male EFO EFO_0001266 >60 years normal EFO EFO_0000761 J knee cartilage P-GSE43269-42 ArrayExpress GSM1059756 extract 1 genomic DNA P-GSE43269-43 ArrayExpress GSM1059756 LE 1 Cy5 and Cy3 P-GSE43269-44 ArrayExpress GSM1059756 A-GEOD-8490 ArrayExpress array assay P-GSE43269-45 ArrayExpress P-GSE43269-46 ArrayExpress P-GSE43269-3 ArrayExpress GSM1059756_sample_table.txt norm GSM1059756_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43269/E-GEOD-43269.processed.1.zip >60 years normal EFO EFO_0000761 J male EFO EFO_0001266 GSM1059755 1 osteoarthritic cartilage knee sample cartilage knee cartilage knee 08478_OA Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 male EFO EFO_0001266 >60 years osteoarthritis EFO EFO_0002506 H knee cartilage P-GSE43269-42 ArrayExpress GSM1059755 extract 1 genomic DNA P-GSE43269-43 ArrayExpress GSM1059755 LE 1 Cy5 and Cy3 P-GSE43269-44 ArrayExpress GSM1059755 A-GEOD-8490 ArrayExpress array assay P-GSE43269-45 ArrayExpress P-GSE43269-46 ArrayExpress P-GSE43269-2 ArrayExpress GSM1059755_sample_table.txt norm GSM1059755_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43269/E-GEOD-43269.processed.1.zip >60 years osteoarthritis EFO EFO_0002506 H male EFO EFO_0001266 GSM1059754 1 osteoarthritic cartilage knee sample cartilage knee cartilage knee 08844_OA Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 female EFO EFO_0001265 >60 years osteoarthritis EFO EFO_0002506 J knee cartilage P-GSE43269-42 ArrayExpress GSM1059754 extract 1 genomic DNA P-GSE43269-43 ArrayExpress GSM1059754 LE 1 Cy5 and Cy3 P-GSE43269-44 ArrayExpress GSM1059754 A-GEOD-8490 ArrayExpress array assay P-GSE43269-45 ArrayExpress P-GSE43269-46 ArrayExpress P-GSE43269-1 ArrayExpress GSM1059754_sample_table.txt norm GSM1059754_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43269/E-GEOD-43269.processed.1.zip >60 years osteoarthritis EFO EFO_0002506 J female EFO EFO_0001265