Source Name Comment [ENA_SAMPLE] Comment [Sample_description] Comment [Sample_source_name] Comment [Sample_title] Characteristics [animal id] Characteristics [breed] Characteristics [infection] Term Source REF Term Accession Number Characteristics [organism] Term Source REF Term Accession Number Characteristics [organism part] Protocol REF Term Source REF Protocol REF Term Source REF Protocol REF Term Source REF Extract Name Comment [INSTRUMENT_MODEL] Comment [LIBRARY_SELECTION] Comment [LIBRARY_SOURCE] Comment [LIBRARY_STRATEGY] Material Type Assay Name Comment [ENA_EXPERIMENT] Comment [Platform_title] Technology Type Protocol REF Term Source REF Scan Name Comment [ENA_RUN] Comment [FASTQ_URI] Derived Array Data File Comment [Derived ArrayExpress FTP file] FactorValue [ANIMAL ID] FactorValue [BREED] FactorValue [INFECTION] Term Source REF Term Accession Number FactorValue [TIME] GSM1059130 1 SRS382805 Sample 49 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CTTGTA Abomasal lymph nodes T. circumcincta Texel Day 21 ALNL49 49 Texel T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059130 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059130 SRX213683 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643397 SRR643397 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643397/SRR643397.fastq.gz GSM1059130_L49_counts.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43241/E-GEOD-43241.processed.1.zip 49 Texel T. circumcincta Day 21 GSM1059129 1 SRS382804 Sample 48 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CAGATC Abomasal lymph nodes T. circumcincta Texel Day 21 ALNL48 48 Texel T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059129 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059129 SRX213682 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643394 SRR643394 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643394/SRR643394.fastq.gz GSM1059129_L48_counts.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43241/E-GEOD-43241.processed.1.zip 48 Texel T. circumcincta Day 21 GSM1059128 1 SRS382803 Sample 47 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag GCCAAT Abomasal lymph nodes T. circumcincta Texel Day 21 ALNL47 47 Texel T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059128 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059128 SRX213681 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643391 SRR643391 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643391/SRR643391.fastq.gz GSM1059128_L47_counts.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43241/E-GEOD-43241.processed.1.zip 47 Texel T. circumcincta Day 21 GSM1059127 1 SRS382802 Sample 46 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag ACAGTG Abomasal lymph nodes T. circumcincta Suffolk Day 21 ALNL46 46 Suffolk T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059127 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059127 SRX213680 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643389 SRR643389 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643389/SRR643389.fastq.gz GSM1059127_L46_counts.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43241/E-GEOD-43241.processed.1.zip 46 Suffolk T. circumcincta Day 21 GSM1059126 1 SRS382801 Sample 45 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag TGACCA Abomasal lymph nodes T. circumcincta Suffolk Day 21 ALNL45 45 Suffolk T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059126 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059126 SRX213679 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643386 SRR643386 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643386/SRR643386.fastq.gz GSM1059126_L45_counts.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43241/E-GEOD-43241.processed.1.zip 45 Suffolk T. circumcincta Day 21 GSM1059125 1 SRS382800 Sample 43 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CGATGT Abomasal lymph nodes T. circumcincta Suffolk Day 21 ALNL43 43 Suffolk T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059125 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059125 SRX213678 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643383 SRR643383 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643383/SRR643383.fastq.gz GSM1059125_L43_counts.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43241/E-GEOD-43241.processed.1.zip 43 Suffolk T. circumcincta Day 21 GSM1059124 1 SRS382799 Sample 42 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CTTGTA Abomasal lymph nodes T. circumcincta Suffolk Day 21 ALNL42 42 Suffolk T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059124 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059124 SRX213677 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643380 SRR643380 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643380/SRR643380.fastq.gz GSM1059124_L42_counts.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43241/E-GEOD-43241.processed.1.zip 42 Suffolk T. circumcincta Day 21 GSM1059123 1 SRS382798 Sample 41 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CAGATC Abomasal lymph nodes T. circumcincta Texel Day 21 ALNL41 41 Texel T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059123 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059123 SRX213676 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643377 SRR643377 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643377/SRR643377.fastq.gz GSM1059123_L41_counts.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43241/E-GEOD-43241.processed.1.zip 41 Texel T. circumcincta Day 21 GSM1059122 1 SRS382797 Sample 40 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag GCCAAT Abomasal lymph nodes T. circumcincta Texel Day 14 ALNL40 40 Texel T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059122 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059122 SRX213675 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643374 SRR643374 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643374/SRR643374.fastq.gz GSM1059122_L40_counts.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43241/E-GEOD-43241.processed.1.zip 40 Texel T. circumcincta Day 14 GSM1059121 1 SRS382796 Sample 39 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag ACAGTG Abomasal lymph nodes T. circumcincta Suffolk Day 14 ALNL39 39 Suffolk T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059121 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059121 SRX213674 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643371 SRR643371 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643371/SRR643371.fastq.gz GSM1059121_L39_counts.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43241/E-GEOD-43241.processed.1.zip 39 Suffolk T. circumcincta Day 14 GSM1059120 1 SRS382795 Sample 38 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag TGACCA Abomasal lymph nodes T. circumcincta Texel Day 14 ALNL38 38 Texel T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059120 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059120 SRX213673 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643369 SRR643369 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643369/SRR643369.fastq.gz GSM1059120_L38_counts.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43241/E-GEOD-43241.processed.1.zip 38 Texel T. circumcincta Day 14 GSM1059119 1 SRS382794 Sample 37 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CGATGT Abomasal lymph nodes T. circumcincta Suffolk Day 14 ALNL37 37 Suffolk T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059119 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059119 SRX213672 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643366 SRR643366 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643366/SRR643366.fastq.gz GSM1059119_L37_counts.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43241/E-GEOD-43241.processed.1.zip 37 Suffolk T. circumcincta Day 14 GSM1059118 1 SRS382793 Sample 36 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CTTGTA Abomasal lymph nodes T. circumcincta Texel Day 14 ALNL36 36 Texel T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059118 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059118 SRX213671 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643363 SRR643363 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643363/SRR643363.fastq.gz GSM1059118_L36_counts.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43241/E-GEOD-43241.processed.1.zip 36 Texel T. circumcincta Day 14 GSM1059117 1 SRS382792 Sample 35 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CAGATC Abomasal lymph nodes T. circumcincta Suffolk Day 14 ALNL35 35 Suffolk T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059117 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059117 SRX213670 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643360 SRR643360 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643360/SRR643360.fastq.gz GSM1059117_L35_counts.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43241/E-GEOD-43241.processed.1.zip 35 Suffolk T. circumcincta Day 14 GSM1059116 1 SRS382791 Sample 34 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag GCCAAT Abomasal lymph nodes T. circumcincta Suffolk Day 14 ALNL34 34 Suffolk T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059116 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059116 SRX213669 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643357 SRR643357 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643357/SRR643357.fastq.gz GSM1059116_L34_counts.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43241/E-GEOD-43241.processed.1.zip 34 Suffolk T. circumcincta Day 14 GSM1059115 1 SRS382790 Sample 33 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag ACAGTG Abomasal lymph nodes T. circumcincta Texel Day 14 ALNL33 33 Texel T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059115 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059115 SRX213668 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643354 SRR643354 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643354/SRR643354.fastq.gz GSM1059115_L33_counts.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43241/E-GEOD-43241.processed.1.zip 33 Texel T. circumcincta Day 14 GSM1059114 1 SRS382789 Sample 32 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag TGACCA Abomasal lymph nodes T. circumcincta Suffolk Day 14 ALNL32 32 Suffolk T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059114 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059114 SRX213667 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643351 SRR643351 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643351/SRR643351.fastq.gz GSM1059114_L32_counts.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43241/E-GEOD-43241.processed.1.zip 32 Suffolk T. circumcincta Day 14 GSM1059113 1 SRS382788 Sample 31 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CGATGT Abomasal lymph nodes T. circumcincta Texel Day 14 ALNL31 31 Texel T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059113 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059113 SRX213666 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643348 SRR643348 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643348/SRR643348.fastq.gz GSM1059113_L31_counts.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43241/E-GEOD-43241.processed.1.zip 31 Texel T. circumcincta Day 14 GSM1059112 1 SRS382787 Sample 30 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CTTGTA Abomasal lymph nodes T. circumcincta Texel Day 7 ALNL30 30 Texel T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059112 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059112 SRX213665 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643345 SRR643345 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643345/SRR643345.fastq.gz GSM1059112_L30_counts.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43241/E-GEOD-43241.processed.1.zip 30 Texel T. circumcincta Day 7 GSM1059111 1 SRS382786 Sample 29 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CAGATC Abomasal lymph nodes T. circumcincta Texel Day 7 ALNL29 29 Texel T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059111 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059111 SRX213664 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643343 SRR643343 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643343/SRR643343.fastq.gz GSM1059111_L29_counts.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43241/E-GEOD-43241.processed.1.zip 29 Texel T. circumcincta Day 7 GSM1059110 1 SRS382785 Sample 28 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag GCCAAT Abomasal lymph nodes T. circumcincta Suffolk Day 7 ALNL28 28 Suffolk T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059110 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059110 SRX213663 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643340 SRR643340 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643340/SRR643340.fastq.gz GSM1059110_L28_counts.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43241/E-GEOD-43241.processed.1.zip 28 Suffolk T. circumcincta Day 7 GSM1059109 1 SRS382784 Sample 27 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag ACAGTG Abomasal lymph nodes T. circumcincta Suffolk Day 7 ALNL27 27 Suffolk T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059109 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059109 SRX213662 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643337 SRR643337 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643337/SRR643337.fastq.gz GSM1059109_L27_counts.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43241/E-GEOD-43241.processed.1.zip 27 Suffolk T. circumcincta Day 7 GSM1059108 1 SRS382783 Sample 26 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag TGACCA Abomasal lymph nodes T. circumcincta Suffolk Day 7 ALNL26 26 Suffolk T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059108 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059108 SRX213661 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643334 SRR643334 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643334/SRR643334.fastq.gz GSM1059108_L26_counts.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43241/E-GEOD-43241.processed.1.zip 26 Suffolk T. circumcincta Day 7 GSM1059107 1 SRS382782 Sample 25 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CGATGT Abomasal lymph nodes T. circumcincta Texel Day 7 ALNL25 25 Texel T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059107 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059107 SRX213660 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643331 SRR643331 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643331/SRR643331.fastq.gz GSM1059107_L25_counts.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43241/E-GEOD-43241.processed.1.zip 25 Texel T. circumcincta Day 7 GSM1059106 1 SRS382781 Sample 22 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag GCCAAT Abomasal lymph nodes T. circumcincta Texel Day 7 ALNL22 22 Texel T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059106 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059106 SRX213659 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643328 SRR643328 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643328/SRR643328.fastq.gz GSM1059106_L22_counts.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43241/E-GEOD-43241.processed.1.zip 22 Texel T. circumcincta Day 7 GSM1059105 1 SRS382780 Sample 21 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag ACAGTG Abomasal lymph nodes T. circumcincta Suffolk Day 7 ALNL21 21 Suffolk T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059105 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059105 SRX213658 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643325 SRR643325 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643325/SRR643325.fastq.gz GSM1059105_L21_counts.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43241/E-GEOD-43241.processed.1.zip 21 Suffolk T. circumcincta Day 7 GSM1059104 1 SRS382779 Sample 20 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag TGACCA Abomasal lymph nodes T. circumcincta Texel Day 3 ALNL20 20 Texel T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059104 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059104 SRX213657 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643322 SRR643322 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643322/SRR643322.fastq.gz GSM1059104_L20_counts.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43241/E-GEOD-43241.processed.1.zip 20 Texel T. circumcincta Day 3 GSM1059103 1 SRS382778 Sample 19 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CGATGT Abomasal lymph nodes T. circumcincta Texel Day 3 ALNL19 19 Texel T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059103 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059103 SRX213656 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643320 SRR643320 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643320/SRR643320.fastq.gz GSM1059103_L19_counts.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43241/E-GEOD-43241.processed.1.zip 19 Texel T. circumcincta Day 3 GSM1059102 1 SRS382777 Sample 18 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CTTGTA Abomasal lymph nodes T. circumcincta Suffolk Day 3 ALNL18 18 Suffolk T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059102 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059102 SRX213655 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643318 SRR643318 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643318/SRR643318.fastq.gz GSM1059102_L18_counts.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43241/E-GEOD-43241.processed.1.zip 18 Suffolk T. circumcincta Day 3 GSM1059101 1 SRS382776 Sample 17 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CAGATC Abomasal lymph nodes T. circumcincta Suffolk Day 3 ALNL17 17 Suffolk T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059101 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059101 SRX213654 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643315 SRR643315 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643315/SRR643315.fastq.gz GSM1059101_L17_counts.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43241/E-GEOD-43241.processed.1.zip 17 Suffolk T. circumcincta Day 3 GSM1059100 1 SRS382775 Sample 16 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag GCCAAT Abomasal lymph nodes T. circumcincta Texel Day 3 ALNL16 16 Texel T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059100 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059100 SRX213653 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643312 SRR643312 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643312/SRR643312.fastq.gz GSM1059100_L16_counts.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43241/E-GEOD-43241.processed.1.zip 16 Texel T. circumcincta Day 3 GSM1059099 1 SRS382774 Sample 15 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag ACAGTG Abomasal lymph nodes T. circumcincta Suffolk Day 3 ALNL15 15 Suffolk T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059099 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059099 SRX213652 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643309 SRR643309 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643309/SRR643309.fastq.gz GSM1059099_L15_counts.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43241/E-GEOD-43241.processed.1.zip 15 Suffolk T. circumcincta Day 3 GSM1059098 1 SRS382773 Sample 14 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag TGACCA Abomasal lymph nodes T. circumcincta Texel Day 3 ALNL14 14 Texel T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059098 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059098 SRX213651 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643306 SRR643306 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643306/SRR643306.fastq.gz GSM1059098_L14_counts.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43241/E-GEOD-43241.processed.1.zip 14 Texel T. circumcincta Day 3 GSM1059097 1 SRS382772 Sample 13 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CGATGT Abomasal lymph nodes T. circumcincta Suffolk Day 3 ALNL13 13 Suffolk T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059097 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059097 SRX213650 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643303 SRR643303 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643303/SRR643303.fastq.gz GSM1059097_L13_counts.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43241/E-GEOD-43241.processed.1.zip 13 Suffolk T. circumcincta Day 3 GSM1059096 1 SRS382771 Sample 12 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CTTGTA Abomasal lymph nodes T. circumcincta Texel Day 3 ALNL12 12 Texel T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059096 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059096 SRX213649 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643300 SRR643300 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643300/SRR643300.fastq.gz GSM1059096_L12_counts.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43241/E-GEOD-43241.processed.1.zip 12 Texel T. circumcincta Day 3 GSM1059095 1 SRS382770 Sample 11 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CAGATC Abomasal lymph nodes T. circumcincta Suffolk Day 3 ALNL11 11 Suffolk T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059095 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059095 SRX213648 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643297 SRR643297 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643297/SRR643297.fastq.gz GSM1059095_L11_counts.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43241/E-GEOD-43241.processed.1.zip 11 Suffolk T. circumcincta Day 3 GSM1059094 1 SRS382769 Sample 10 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag GCCAAT Abomasal lymph nodes control Suffolk Day 0 ALNL10 10 Suffolk control EFO EFO_0001461 Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059094 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059094 SRX213647 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643295 SRR643295 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643295/SRR643295.fastq.gz GSM1059094_L10_counts.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43241/E-GEOD-43241.processed.1.zip 10 Suffolk control EFO EFO_0001461 Day 0 GSM1059093 1 SRS382768 Sample 9 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag ACAGTG Abomasal lymph nodes control Texel Day 0 ALNL9 9 Texel control EFO EFO_0001461 Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059093 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059093 SRX213646 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643292 SRR643292 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643292/SRR643292.fastq.gz GSM1059093_L9_counts.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43241/E-GEOD-43241.processed.1.zip 9 Texel control EFO EFO_0001461 Day 0 GSM1059092 1 SRS382767 Sample 8 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag TGACCA Abomasal lymph nodes control Texel Day 0 ALNL8 8 Texel control EFO EFO_0001461 Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059092 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059092 SRX213645 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643289 SRR643289 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643289/SRR643289.fastq.gz GSM1059092_L8_counts.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43241/E-GEOD-43241.processed.1.zip 8 Texel control EFO EFO_0001461 Day 0 GSM1059091 1 SRS382766 Sample 7 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CTTGTA Abomasal lymph nodes control Texel Day 0 ALNL7 7 Texel control EFO EFO_0001461 Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059091 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059091 SRX213644 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643286 SRR643286 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643286/SRR643286.fastq.gz GSM1059091_L7_counts.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43241/E-GEOD-43241.processed.1.zip 7 Texel control EFO EFO_0001461 Day 0 GSM1059090 1 SRS382765 Sample 6 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CAGATC Abomasal lymph nodes control Texel Day 0 ALNL6 6 Texel control EFO EFO_0001461 Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059090 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059090 SRX213643 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643283 SRR643283 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643283/SRR643283.fastq.gz GSM1059090_L6_counts.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43241/E-GEOD-43241.processed.1.zip 6 Texel control EFO EFO_0001461 Day 0 GSM1059089 1 SRS382764 Sample 5 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag GCCAAT Abomasal lymph nodes control Suffolk Day 0 ALNL5 5 Suffolk control EFO EFO_0001461 Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059089 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059089 SRX213642 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643280 SRR643280 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643280/SRR643280.fastq.gz GSM1059089_L5_counts.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43241/E-GEOD-43241.processed.1.zip 5 Suffolk control EFO EFO_0001461 Day 0 GSM1059088 1 SRS382763 Sample 4 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag ACAGTG Abomasal lymph nodes control Texel Day 0 ALNL4 4 Texel control EFO EFO_0001461 Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059088 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059088 SRX213641 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643277 SRR643277 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643277/SRR643277.fastq.gz GSM1059088_L4_counts.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43241/E-GEOD-43241.processed.1.zip 4 Texel control EFO EFO_0001461 Day 0 GSM1059087 1 SRS382762 Sample 3 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag TGACCA Abomasal lymph nodes control Suffolk Day 0 ALNL3 3 Suffolk control EFO EFO_0001461 Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059087 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059087 SRX213640 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643274 SRR643274 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643274/SRR643274.fastq.gz GSM1059087_L3_counts.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43241/E-GEOD-43241.processed.1.zip 3 Suffolk control EFO EFO_0001461 Day 0 GSM1059086 1 SRS382761 Sample 2 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CGATGT Abomasal lymph nodes control Suffolk Day 0 ALNL2 2 Suffolk control EFO EFO_0001461 Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059086 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059086 SRX213639 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643271 SRR643271 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643271/SRR643271.fastq.gz GSM1059086_L2_counts.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43241/E-GEOD-43241.processed.1.zip 2 Suffolk control EFO EFO_0001461 Day 0 GSM1059085 1 SRS382760 Sample 1 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CGATGT Abomasal lymph nodes control Texel Day 0 ALNL1 1 Texel control EFO EFO_0001461 Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059085 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059085 SRX213638 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643268 SRR643268 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643268/SRR643268.fastq.gz GSM1059085_L1_counts.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43241/E-GEOD-43241.processed.1.zip 1 Texel control EFO EFO_0001461 Day 0 GSM1059130 1 SRS382805 Sample 49 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CTTGTA Abomasal lymph nodes T. circumcincta Texel Day 21 ALNL49 49 Texel T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059130 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059130 SRX213683 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643399 SRR643399 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643399/SRR643399.fastq.gz 49 Texel T. circumcincta Day 21 GSM1059130 1 SRS382805 Sample 49 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CTTGTA Abomasal lymph nodes T. circumcincta Texel Day 21 ALNL49 49 Texel T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059130 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059130 SRX213683 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643398 SRR643398 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643398/SRR643398.fastq.gz 49 Texel T. circumcincta Day 21 GSM1059129 1 SRS382804 Sample 48 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CAGATC Abomasal lymph nodes T. circumcincta Texel Day 21 ALNL48 48 Texel T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059129 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059129 SRX213682 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643396 SRR643396 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643396/SRR643396.fastq.gz 48 Texel T. circumcincta Day 21 GSM1059129 1 SRS382804 Sample 48 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CAGATC Abomasal lymph nodes T. circumcincta Texel Day 21 ALNL48 48 Texel T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059129 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059129 SRX213682 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643395 SRR643395 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643395/SRR643395.fastq.gz 48 Texel T. circumcincta Day 21 GSM1059128 1 SRS382803 Sample 47 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag GCCAAT Abomasal lymph nodes T. circumcincta Texel Day 21 ALNL47 47 Texel T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059128 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059128 SRX213681 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643393 SRR643393 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643393/SRR643393.fastq.gz 47 Texel T. circumcincta Day 21 GSM1059128 1 SRS382803 Sample 47 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag GCCAAT Abomasal lymph nodes T. circumcincta Texel Day 21 ALNL47 47 Texel T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059128 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059128 SRX213681 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643392 SRR643392 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643392/SRR643392.fastq.gz 47 Texel T. circumcincta Day 21 GSM1059127 1 SRS382802 Sample 46 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag ACAGTG Abomasal lymph nodes T. circumcincta Suffolk Day 21 ALNL46 46 Suffolk T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059127 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059127 SRX213680 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643390 SRR643390 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643390/SRR643390.fastq.gz 46 Suffolk T. circumcincta Day 21 GSM1059126 1 SRS382801 Sample 45 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag TGACCA Abomasal lymph nodes T. circumcincta Suffolk Day 21 ALNL45 45 Suffolk T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059126 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059126 SRX213679 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643388 SRR643388 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643388/SRR643388.fastq.gz 45 Suffolk T. circumcincta Day 21 GSM1059126 1 SRS382801 Sample 45 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag TGACCA Abomasal lymph nodes T. circumcincta Suffolk Day 21 ALNL45 45 Suffolk T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059126 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059126 SRX213679 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643387 SRR643387 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643387/SRR643387.fastq.gz 45 Suffolk T. circumcincta Day 21 GSM1059125 1 SRS382800 Sample 43 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CGATGT Abomasal lymph nodes T. circumcincta Suffolk Day 21 ALNL43 43 Suffolk T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059125 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059125 SRX213678 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643385 SRR643385 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643385/SRR643385.fastq.gz 43 Suffolk T. circumcincta Day 21 GSM1059125 1 SRS382800 Sample 43 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CGATGT Abomasal lymph nodes T. circumcincta Suffolk Day 21 ALNL43 43 Suffolk T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059125 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059125 SRX213678 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643384 SRR643384 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643384/SRR643384.fastq.gz 43 Suffolk T. circumcincta Day 21 GSM1059124 1 SRS382799 Sample 42 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CTTGTA Abomasal lymph nodes T. circumcincta Suffolk Day 21 ALNL42 42 Suffolk T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059124 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059124 SRX213677 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643382 SRR643382 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643382/SRR643382.fastq.gz 42 Suffolk T. circumcincta Day 21 GSM1059124 1 SRS382799 Sample 42 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CTTGTA Abomasal lymph nodes T. circumcincta Suffolk Day 21 ALNL42 42 Suffolk T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059124 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059124 SRX213677 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643381 SRR643381 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643381/SRR643381.fastq.gz 42 Suffolk T. circumcincta Day 21 GSM1059123 1 SRS382798 Sample 41 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CAGATC Abomasal lymph nodes T. circumcincta Texel Day 21 ALNL41 41 Texel T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059123 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059123 SRX213676 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643379 SRR643379 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643379/SRR643379.fastq.gz 41 Texel T. circumcincta Day 21 GSM1059123 1 SRS382798 Sample 41 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CAGATC Abomasal lymph nodes T. circumcincta Texel Day 21 ALNL41 41 Texel T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059123 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059123 SRX213676 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643378 SRR643378 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643378/SRR643378.fastq.gz 41 Texel T. circumcincta Day 21 GSM1059122 1 SRS382797 Sample 40 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag GCCAAT Abomasal lymph nodes T. circumcincta Texel Day 14 ALNL40 40 Texel T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059122 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059122 SRX213675 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643376 SRR643376 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643376/SRR643376.fastq.gz 40 Texel T. circumcincta Day 14 GSM1059122 1 SRS382797 Sample 40 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag GCCAAT Abomasal lymph nodes T. circumcincta Texel Day 14 ALNL40 40 Texel T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059122 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059122 SRX213675 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643375 SRR643375 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643375/SRR643375.fastq.gz 40 Texel T. circumcincta Day 14 GSM1059121 1 SRS382796 Sample 39 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag ACAGTG Abomasal lymph nodes T. circumcincta Suffolk Day 14 ALNL39 39 Suffolk T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059121 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059121 SRX213674 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643373 SRR643373 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643373/SRR643373.fastq.gz 39 Suffolk T. circumcincta Day 14 GSM1059121 1 SRS382796 Sample 39 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag ACAGTG Abomasal lymph nodes T. circumcincta Suffolk Day 14 ALNL39 39 Suffolk T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059121 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059121 SRX213674 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643372 SRR643372 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643372/SRR643372.fastq.gz 39 Suffolk T. circumcincta Day 14 GSM1059120 1 SRS382795 Sample 38 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag TGACCA Abomasal lymph nodes T. circumcincta Texel Day 14 ALNL38 38 Texel T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059120 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059120 SRX213673 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643370 SRR643370 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643370/SRR643370.fastq.gz 38 Texel T. circumcincta Day 14 GSM1059119 1 SRS382794 Sample 37 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CGATGT Abomasal lymph nodes T. circumcincta Suffolk Day 14 ALNL37 37 Suffolk T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059119 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059119 SRX213672 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643368 SRR643368 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643368/SRR643368.fastq.gz 37 Suffolk T. circumcincta Day 14 GSM1059119 1 SRS382794 Sample 37 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CGATGT Abomasal lymph nodes T. circumcincta Suffolk Day 14 ALNL37 37 Suffolk T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059119 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059119 SRX213672 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643367 SRR643367 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643367/SRR643367.fastq.gz 37 Suffolk T. circumcincta Day 14 GSM1059118 1 SRS382793 Sample 36 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CTTGTA Abomasal lymph nodes T. circumcincta Texel Day 14 ALNL36 36 Texel T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059118 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059118 SRX213671 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643365 SRR643365 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643365/SRR643365.fastq.gz 36 Texel T. circumcincta Day 14 GSM1059118 1 SRS382793 Sample 36 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CTTGTA Abomasal lymph nodes T. circumcincta Texel Day 14 ALNL36 36 Texel T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059118 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059118 SRX213671 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643364 SRR643364 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643364/SRR643364.fastq.gz 36 Texel T. circumcincta Day 14 GSM1059117 1 SRS382792 Sample 35 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CAGATC Abomasal lymph nodes T. circumcincta Suffolk Day 14 ALNL35 35 Suffolk T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059117 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059117 SRX213670 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643362 SRR643362 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643362/SRR643362.fastq.gz 35 Suffolk T. circumcincta Day 14 GSM1059117 1 SRS382792 Sample 35 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CAGATC Abomasal lymph nodes T. circumcincta Suffolk Day 14 ALNL35 35 Suffolk T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059117 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059117 SRX213670 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643361 SRR643361 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643361/SRR643361.fastq.gz 35 Suffolk T. circumcincta Day 14 GSM1059116 1 SRS382791 Sample 34 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag GCCAAT Abomasal lymph nodes T. circumcincta Suffolk Day 14 ALNL34 34 Suffolk T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059116 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059116 SRX213669 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643359 SRR643359 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643359/SRR643359.fastq.gz 34 Suffolk T. circumcincta Day 14 GSM1059116 1 SRS382791 Sample 34 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag GCCAAT Abomasal lymph nodes T. circumcincta Suffolk Day 14 ALNL34 34 Suffolk T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059116 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059116 SRX213669 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643358 SRR643358 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643358/SRR643358.fastq.gz 34 Suffolk T. circumcincta Day 14 GSM1059115 1 SRS382790 Sample 33 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag ACAGTG Abomasal lymph nodes T. circumcincta Texel Day 14 ALNL33 33 Texel T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059115 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059115 SRX213668 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643356 SRR643356 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643356/SRR643356.fastq.gz 33 Texel T. circumcincta Day 14 GSM1059115 1 SRS382790 Sample 33 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag ACAGTG Abomasal lymph nodes T. circumcincta Texel Day 14 ALNL33 33 Texel T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059115 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059115 SRX213668 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643355 SRR643355 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643355/SRR643355.fastq.gz 33 Texel T. circumcincta Day 14 GSM1059114 1 SRS382789 Sample 32 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag TGACCA Abomasal lymph nodes T. circumcincta Suffolk Day 14 ALNL32 32 Suffolk T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059114 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059114 SRX213667 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643353 SRR643353 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643353/SRR643353.fastq.gz 32 Suffolk T. circumcincta Day 14 GSM1059114 1 SRS382789 Sample 32 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag TGACCA Abomasal lymph nodes T. circumcincta Suffolk Day 14 ALNL32 32 Suffolk T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059114 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059114 SRX213667 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643352 SRR643352 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643352/SRR643352.fastq.gz 32 Suffolk T. circumcincta Day 14 GSM1059113 1 SRS382788 Sample 31 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CGATGT Abomasal lymph nodes T. circumcincta Texel Day 14 ALNL31 31 Texel T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059113 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059113 SRX213666 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643350 SRR643350 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643350/SRR643350.fastq.gz 31 Texel T. circumcincta Day 14 GSM1059113 1 SRS382788 Sample 31 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CGATGT Abomasal lymph nodes T. circumcincta Texel Day 14 ALNL31 31 Texel T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059113 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059113 SRX213666 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643349 SRR643349 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643349/SRR643349.fastq.gz 31 Texel T. circumcincta Day 14 GSM1059112 1 SRS382787 Sample 30 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CTTGTA Abomasal lymph nodes T. circumcincta Texel Day 7 ALNL30 30 Texel T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059112 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059112 SRX213665 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643347 SRR643347 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643347/SRR643347.fastq.gz 30 Texel T. circumcincta Day 7 GSM1059112 1 SRS382787 Sample 30 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CTTGTA Abomasal lymph nodes T. circumcincta Texel Day 7 ALNL30 30 Texel T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059112 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059112 SRX213665 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643346 SRR643346 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643346/SRR643346.fastq.gz 30 Texel T. circumcincta Day 7 GSM1059111 1 SRS382786 Sample 29 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CAGATC Abomasal lymph nodes T. circumcincta Texel Day 7 ALNL29 29 Texel T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059111 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059111 SRX213664 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643344 SRR643344 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643344/SRR643344.fastq.gz 29 Texel T. circumcincta Day 7 GSM1059110 1 SRS382785 Sample 28 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag GCCAAT Abomasal lymph nodes T. circumcincta Suffolk Day 7 ALNL28 28 Suffolk T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059110 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059110 SRX213663 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643342 SRR643342 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643342/SRR643342.fastq.gz 28 Suffolk T. circumcincta Day 7 GSM1059110 1 SRS382785 Sample 28 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag GCCAAT Abomasal lymph nodes T. circumcincta Suffolk Day 7 ALNL28 28 Suffolk T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059110 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059110 SRX213663 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643341 SRR643341 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643341/SRR643341.fastq.gz 28 Suffolk T. circumcincta Day 7 GSM1059109 1 SRS382784 Sample 27 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag ACAGTG Abomasal lymph nodes T. circumcincta Suffolk Day 7 ALNL27 27 Suffolk T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059109 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059109 SRX213662 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643339 SRR643339 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643339/SRR643339.fastq.gz 27 Suffolk T. circumcincta Day 7 GSM1059109 1 SRS382784 Sample 27 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag ACAGTG Abomasal lymph nodes T. circumcincta Suffolk Day 7 ALNL27 27 Suffolk T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059109 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059109 SRX213662 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643338 SRR643338 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643338/SRR643338.fastq.gz 27 Suffolk T. circumcincta Day 7 GSM1059108 1 SRS382783 Sample 26 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag TGACCA Abomasal lymph nodes T. circumcincta Suffolk Day 7 ALNL26 26 Suffolk T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059108 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059108 SRX213661 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643336 SRR643336 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643336/SRR643336.fastq.gz 26 Suffolk T. circumcincta Day 7 GSM1059108 1 SRS382783 Sample 26 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag TGACCA Abomasal lymph nodes T. circumcincta Suffolk Day 7 ALNL26 26 Suffolk T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059108 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059108 SRX213661 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643335 SRR643335 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643335/SRR643335.fastq.gz 26 Suffolk T. circumcincta Day 7 GSM1059107 1 SRS382782 Sample 25 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CGATGT Abomasal lymph nodes T. circumcincta Texel Day 7 ALNL25 25 Texel T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059107 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059107 SRX213660 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643333 SRR643333 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643333/SRR643333.fastq.gz 25 Texel T. circumcincta Day 7 GSM1059107 1 SRS382782 Sample 25 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CGATGT Abomasal lymph nodes T. circumcincta Texel Day 7 ALNL25 25 Texel T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059107 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059107 SRX213660 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643332 SRR643332 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643332/SRR643332.fastq.gz 25 Texel T. circumcincta Day 7 GSM1059106 1 SRS382781 Sample 22 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag GCCAAT Abomasal lymph nodes T. circumcincta Texel Day 7 ALNL22 22 Texel T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059106 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059106 SRX213659 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643330 SRR643330 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643330/SRR643330.fastq.gz 22 Texel T. circumcincta Day 7 GSM1059106 1 SRS382781 Sample 22 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag GCCAAT Abomasal lymph nodes T. circumcincta Texel Day 7 ALNL22 22 Texel T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059106 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059106 SRX213659 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643329 SRR643329 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643329/SRR643329.fastq.gz 22 Texel T. circumcincta Day 7 GSM1059105 1 SRS382780 Sample 21 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag ACAGTG Abomasal lymph nodes T. circumcincta Suffolk Day 7 ALNL21 21 Suffolk T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059105 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059105 SRX213658 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643327 SRR643327 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643327/SRR643327.fastq.gz 21 Suffolk T. circumcincta Day 7 GSM1059105 1 SRS382780 Sample 21 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag ACAGTG Abomasal lymph nodes T. circumcincta Suffolk Day 7 ALNL21 21 Suffolk T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059105 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059105 SRX213658 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643326 SRR643326 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643326/SRR643326.fastq.gz 21 Suffolk T. circumcincta Day 7 GSM1059104 1 SRS382779 Sample 20 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag TGACCA Abomasal lymph nodes T. circumcincta Texel Day 3 ALNL20 20 Texel T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059104 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059104 SRX213657 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643324 SRR643324 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643324/SRR643324.fastq.gz 20 Texel T. circumcincta Day 3 GSM1059104 1 SRS382779 Sample 20 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag TGACCA Abomasal lymph nodes T. circumcincta Texel Day 3 ALNL20 20 Texel T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059104 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059104 SRX213657 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643323 SRR643323 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643323/SRR643323.fastq.gz 20 Texel T. circumcincta Day 3 GSM1059103 1 SRS382778 Sample 19 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CGATGT Abomasal lymph nodes T. circumcincta Texel Day 3 ALNL19 19 Texel T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059103 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059103 SRX213656 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643321 SRR643321 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643321/SRR643321.fastq.gz 19 Texel T. circumcincta Day 3 GSM1059102 1 SRS382777 Sample 18 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CTTGTA Abomasal lymph nodes T. circumcincta Suffolk Day 3 ALNL18 18 Suffolk T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059102 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059102 SRX213655 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643319 SRR643319 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643319/SRR643319.fastq.gz 18 Suffolk T. circumcincta Day 3 GSM1059101 1 SRS382776 Sample 17 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CAGATC Abomasal lymph nodes T. circumcincta Suffolk Day 3 ALNL17 17 Suffolk T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059101 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059101 SRX213654 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643317 SRR643317 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643317/SRR643317.fastq.gz 17 Suffolk T. circumcincta Day 3 GSM1059101 1 SRS382776 Sample 17 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CAGATC Abomasal lymph nodes T. circumcincta Suffolk Day 3 ALNL17 17 Suffolk T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059101 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059101 SRX213654 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643316 SRR643316 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643316/SRR643316.fastq.gz 17 Suffolk T. circumcincta Day 3 GSM1059100 1 SRS382775 Sample 16 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag GCCAAT Abomasal lymph nodes T. circumcincta Texel Day 3 ALNL16 16 Texel T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059100 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059100 SRX213653 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643314 SRR643314 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643314/SRR643314.fastq.gz 16 Texel T. circumcincta Day 3 GSM1059100 1 SRS382775 Sample 16 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag GCCAAT Abomasal lymph nodes T. circumcincta Texel Day 3 ALNL16 16 Texel T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059100 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059100 SRX213653 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643313 SRR643313 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643313/SRR643313.fastq.gz 16 Texel T. circumcincta Day 3 GSM1059099 1 SRS382774 Sample 15 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag ACAGTG Abomasal lymph nodes T. circumcincta Suffolk Day 3 ALNL15 15 Suffolk T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059099 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059099 SRX213652 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643311 SRR643311 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643311/SRR643311.fastq.gz 15 Suffolk T. circumcincta Day 3 GSM1059099 1 SRS382774 Sample 15 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag ACAGTG Abomasal lymph nodes T. circumcincta Suffolk Day 3 ALNL15 15 Suffolk T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059099 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059099 SRX213652 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643310 SRR643310 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643310/SRR643310.fastq.gz 15 Suffolk T. circumcincta Day 3 GSM1059098 1 SRS382773 Sample 14 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag TGACCA Abomasal lymph nodes T. circumcincta Texel Day 3 ALNL14 14 Texel T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059098 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059098 SRX213651 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643308 SRR643308 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643308/SRR643308.fastq.gz 14 Texel T. circumcincta Day 3 GSM1059098 1 SRS382773 Sample 14 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag TGACCA Abomasal lymph nodes T. circumcincta Texel Day 3 ALNL14 14 Texel T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059098 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059098 SRX213651 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643307 SRR643307 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643307/SRR643307.fastq.gz 14 Texel T. circumcincta Day 3 GSM1059097 1 SRS382772 Sample 13 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CGATGT Abomasal lymph nodes T. circumcincta Suffolk Day 3 ALNL13 13 Suffolk T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059097 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059097 SRX213650 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643305 SRR643305 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643305/SRR643305.fastq.gz 13 Suffolk T. circumcincta Day 3 GSM1059097 1 SRS382772 Sample 13 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CGATGT Abomasal lymph nodes T. circumcincta Suffolk Day 3 ALNL13 13 Suffolk T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059097 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059097 SRX213650 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643304 SRR643304 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643304/SRR643304.fastq.gz 13 Suffolk T. circumcincta Day 3 GSM1059096 1 SRS382771 Sample 12 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CTTGTA Abomasal lymph nodes T. circumcincta Texel Day 3 ALNL12 12 Texel T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059096 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059096 SRX213649 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643302 SRR643302 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643302/SRR643302.fastq.gz 12 Texel T. circumcincta Day 3 GSM1059096 1 SRS382771 Sample 12 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CTTGTA Abomasal lymph nodes T. circumcincta Texel Day 3 ALNL12 12 Texel T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059096 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059096 SRX213649 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643301 SRR643301 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643301/SRR643301.fastq.gz 12 Texel T. circumcincta Day 3 GSM1059095 1 SRS382770 Sample 11 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CAGATC Abomasal lymph nodes T. circumcincta Suffolk Day 3 ALNL11 11 Suffolk T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059095 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059095 SRX213648 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643299 SRR643299 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643299/SRR643299.fastq.gz 11 Suffolk T. circumcincta Day 3 GSM1059095 1 SRS382770 Sample 11 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CAGATC Abomasal lymph nodes T. circumcincta Suffolk Day 3 ALNL11 11 Suffolk T. circumcincta Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059095 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059095 SRX213648 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643298 SRR643298 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643298/SRR643298.fastq.gz 11 Suffolk T. circumcincta Day 3 GSM1059094 1 SRS382769 Sample 10 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag GCCAAT Abomasal lymph nodes control Suffolk Day 0 ALNL10 10 Suffolk control EFO EFO_0001461 Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059094 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059094 SRX213647 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643296 SRR643296 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643296/SRR643296.fastq.gz 10 Suffolk control EFO EFO_0001461 Day 0 GSM1059093 1 SRS382768 Sample 9 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag ACAGTG Abomasal lymph nodes control Texel Day 0 ALNL9 9 Texel control EFO EFO_0001461 Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059093 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059093 SRX213646 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643294 SRR643294 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643294/SRR643294.fastq.gz 9 Texel control EFO EFO_0001461 Day 0 GSM1059093 1 SRS382768 Sample 9 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag ACAGTG Abomasal lymph nodes control Texel Day 0 ALNL9 9 Texel control EFO EFO_0001461 Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059093 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059093 SRX213646 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643293 SRR643293 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643293/SRR643293.fastq.gz 9 Texel control EFO EFO_0001461 Day 0 GSM1059092 1 SRS382767 Sample 8 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag TGACCA Abomasal lymph nodes control Texel Day 0 ALNL8 8 Texel control EFO EFO_0001461 Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059092 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059092 SRX213645 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643291 SRR643291 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643291/SRR643291.fastq.gz 8 Texel control EFO EFO_0001461 Day 0 GSM1059092 1 SRS382767 Sample 8 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag TGACCA Abomasal lymph nodes control Texel Day 0 ALNL8 8 Texel control EFO EFO_0001461 Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059092 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059092 SRX213645 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643290 SRR643290 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643290/SRR643290.fastq.gz 8 Texel control EFO EFO_0001461 Day 0 GSM1059091 1 SRS382766 Sample 7 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CTTGTA Abomasal lymph nodes control Texel Day 0 ALNL7 7 Texel control EFO EFO_0001461 Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059091 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059091 SRX213644 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643288 SRR643288 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643288/SRR643288.fastq.gz 7 Texel control EFO EFO_0001461 Day 0 GSM1059091 1 SRS382766 Sample 7 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CTTGTA Abomasal lymph nodes control Texel Day 0 ALNL7 7 Texel control EFO EFO_0001461 Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059091 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059091 SRX213644 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643287 SRR643287 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643287/SRR643287.fastq.gz 7 Texel control EFO EFO_0001461 Day 0 GSM1059090 1 SRS382765 Sample 6 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CAGATC Abomasal lymph nodes control Texel Day 0 ALNL6 6 Texel control EFO EFO_0001461 Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059090 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059090 SRX213643 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643285 SRR643285 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643285/SRR643285.fastq.gz 6 Texel control EFO EFO_0001461 Day 0 GSM1059090 1 SRS382765 Sample 6 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CAGATC Abomasal lymph nodes control Texel Day 0 ALNL6 6 Texel control EFO EFO_0001461 Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059090 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059090 SRX213643 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643284 SRR643284 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643284/SRR643284.fastq.gz 6 Texel control EFO EFO_0001461 Day 0 GSM1059089 1 SRS382764 Sample 5 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag GCCAAT Abomasal lymph nodes control Suffolk Day 0 ALNL5 5 Suffolk control EFO EFO_0001461 Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059089 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059089 SRX213642 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643282 SRR643282 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643282/SRR643282.fastq.gz 5 Suffolk control EFO EFO_0001461 Day 0 GSM1059089 1 SRS382764 Sample 5 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag GCCAAT Abomasal lymph nodes control Suffolk Day 0 ALNL5 5 Suffolk control EFO EFO_0001461 Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059089 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059089 SRX213642 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643281 SRR643281 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643281/SRR643281.fastq.gz 5 Suffolk control EFO EFO_0001461 Day 0 GSM1059088 1 SRS382763 Sample 4 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag ACAGTG Abomasal lymph nodes control Texel Day 0 ALNL4 4 Texel control EFO EFO_0001461 Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059088 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059088 SRX213641 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643279 SRR643279 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643279/SRR643279.fastq.gz 4 Texel control EFO EFO_0001461 Day 0 GSM1059088 1 SRS382763 Sample 4 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag ACAGTG Abomasal lymph nodes control Texel Day 0 ALNL4 4 Texel control EFO EFO_0001461 Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059088 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059088 SRX213641 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643278 SRR643278 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643278/SRR643278.fastq.gz 4 Texel control EFO EFO_0001461 Day 0 GSM1059087 1 SRS382762 Sample 3 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag TGACCA Abomasal lymph nodes control Suffolk Day 0 ALNL3 3 Suffolk control EFO EFO_0001461 Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059087 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059087 SRX213640 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643276 SRR643276 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643276/SRR643276.fastq.gz 3 Suffolk control EFO EFO_0001461 Day 0 GSM1059087 1 SRS382762 Sample 3 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag TGACCA Abomasal lymph nodes control Suffolk Day 0 ALNL3 3 Suffolk control EFO EFO_0001461 Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059087 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059087 SRX213640 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643275 SRR643275 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643275/SRR643275.fastq.gz 3 Suffolk control EFO EFO_0001461 Day 0 GSM1059086 1 SRS382761 Sample 2 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CGATGT Abomasal lymph nodes control Suffolk Day 0 ALNL2 2 Suffolk control EFO EFO_0001461 Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059086 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059086 SRX213639 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643273 SRR643273 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643273/SRR643273.fastq.gz 2 Suffolk control EFO EFO_0001461 Day 0 GSM1059086 1 SRS382761 Sample 2 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CGATGT Abomasal lymph nodes control Suffolk Day 0 ALNL2 2 Suffolk control EFO EFO_0001461 Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059086 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059086 SRX213639 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643272 SRR643272 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643272/SRR643272.fastq.gz 2 Suffolk control EFO EFO_0001461 Day 0 GSM1059085 1 SRS382760 Sample 1 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CGATGT Abomasal lymph nodes control Texel Day 0 ALNL1 1 Texel control EFO EFO_0001461 Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059085 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059085 SRX213638 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643270 SRR643270 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643270/SRR643270.fastq.gz 1 Texel control EFO EFO_0001461 Day 0 GSM1059085 1 SRS382760 Sample 1 was run in three different Flowcell. The process file was a combined file of data from Flowcel 1, 2 and 3 with the tag CGATGT Abomasal lymph nodes control Texel Day 0 ALNL1 1 Texel control EFO EFO_0001461 Ovis aries EFO http://purl.obolibrary.org/obo/NCBITaxon_9940 Lymph nodes P-GSE43241-1 ArrayExpress P-GSE43241-2 ArrayExpress P-GSE43241-3 ArrayExpress GSM1059085 extract 1 Illumina Genome Analyzer II cDNA transcriptomic RNA-Seq total RNA GSM1059085 SRX213638 Illumina Genome Analyzer II (Ovis aries) sequencing assay P-GSE43241-4 ArrayExpress SRR643269 SRR643269 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643269/SRR643269.fastq.gz 1 Texel control EFO EFO_0001461 Day 0