Source Name	Comment [Sample_description]	Comment [Sample_source_name]	Comment [Sample_title]	Characteristics [Organism]	Term Source REF	Term Accession Number	Characteristics [age]	Characteristics [condition]	Characteristics [organism part]	Term Source REF	Term Accession Number	Characteristics [strain or line]	Protocol REF	Term Source REF	Protocol REF	Term Source REF	Protocol REF	Term Source REF	Extract Name	Comment [INSTRUMENT_MODEL]	Comment [LIBRARY_SELECTION]	Comment [LIBRARY_SOURCE]	Comment [LIBRARY_STRATEGY]	Material Type	Assay Name	Comment [ENA_EXPERIMENT]	Comment [Platform_title]	Technology Type	Protocol REF	Term Source REF	Scan Name	Comment [ENA_RUN]	Comment [FASTQ_URI]	Derived Array Data File	Comment [Derived ArrayExpress FTP file]	FactorValue [AGE]	FactorValue [CONDITION]	FactorValue [ORGANISM PART]	Term Source REF	Term Accession Number
GSM1059076 1	Immunoprecipitation using antibodies against 5mC followed by deep sequencing	Sperm	Sperm paternal T2D	Mus musculus	EFO	http://purl.org/obo/owl/NCBITaxon#NCBITaxon_10090	16 weeks	paternal T2D	sperm	EFO	EFO_0001005	ICR	P-GSE43238-1	ArrayExpress	P-GSE43238-2	ArrayExpress	P-GSE43238-3	ArrayExpress	GSM1059076 extract 1	Illumina Genome Analyzer	5-methylcytidine antibody	genomic	MeDIP-Seq	genomic DNA	GSM1059076	SRX213637	Illumina Genome Analyzer (Mus musculus)	sequencing assay	P-GSE43238-4	ArrayExpress	SRR643267_2.fastq.gz	SRR643267	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643267/SRR643267_2.fastq.gz	GSM1059076_Sperm_T_peaks.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43238/E-GEOD-43238.processed.1.zip	16 weeks	paternal T2D	sperm	EFO	EFO_0001005
GSM1059076 1	Immunoprecipitation using antibodies against 5mC followed by deep sequencing	Sperm	Sperm paternal T2D	Mus musculus	EFO	http://purl.org/obo/owl/NCBITaxon#NCBITaxon_10090	16 weeks	paternal T2D	sperm	EFO	EFO_0001005	ICR	P-GSE43238-1	ArrayExpress	P-GSE43238-2	ArrayExpress	P-GSE43238-3	ArrayExpress	GSM1059076 extract 1	Illumina Genome Analyzer	5-methylcytidine antibody	genomic	MeDIP-Seq	genomic DNA	GSM1059076	SRX213637	Illumina Genome Analyzer (Mus musculus)	sequencing assay	P-GSE43238-4	ArrayExpress	SRR643267_1.fastq.gz	SRR643267	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643267/SRR643267_1.fastq.gz	GSM1059076_Sperm_T_peaks.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43238/E-GEOD-43238.processed.1.zip	16 weeks	paternal T2D	sperm	EFO	EFO_0001005
GSM1059075 1	Immunoprecipitation using antibodies against 5mC followed by deep sequencing	Sperm	Sperm paternal control	Mus musculus	EFO	http://purl.org/obo/owl/NCBITaxon#NCBITaxon_10090	16 weeks	paternal control	sperm	EFO	EFO_0001005	ICR	P-GSE43238-1	ArrayExpress	P-GSE43238-2	ArrayExpress	P-GSE43238-3	ArrayExpress	GSM1059075 extract 1	Illumina Genome Analyzer	5-methylcytidine antibody	genomic	MeDIP-Seq	genomic DNA	GSM1059075	SRX213636	Illumina Genome Analyzer (Mus musculus)	sequencing assay	P-GSE43238-4	ArrayExpress	SRR643266_2.fastq.gz	SRR643266	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643266/SRR643266_2.fastq.gz	GSM1059075_Sperm_C_peaks.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43238/E-GEOD-43238.processed.1.zip	16 weeks	paternal control	sperm	EFO	EFO_0001005
GSM1059075 1	Immunoprecipitation using antibodies against 5mC followed by deep sequencing	Sperm	Sperm paternal control	Mus musculus	EFO	http://purl.org/obo/owl/NCBITaxon#NCBITaxon_10090	16 weeks	paternal control	sperm	EFO	EFO_0001005	ICR	P-GSE43238-1	ArrayExpress	P-GSE43238-2	ArrayExpress	P-GSE43238-3	ArrayExpress	GSM1059075 extract 1	Illumina Genome Analyzer	5-methylcytidine antibody	genomic	MeDIP-Seq	genomic DNA	GSM1059075	SRX213636	Illumina Genome Analyzer (Mus musculus)	sequencing assay	P-GSE43238-4	ArrayExpress	SRR643266_1.fastq.gz	SRR643266	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643266/SRR643266_1.fastq.gz	GSM1059075_Sperm_C_peaks.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43238/E-GEOD-43238.processed.1.zip	16 weeks	paternal control	sperm	EFO	EFO_0001005
GSM1059074 1	Immunoprecipitation using antibodies against 5mC followed by deep sequencing	Pancreatic Islets	Pancreatic Islets paternal T2D	Mus musculus	EFO	http://purl.org/obo/owl/NCBITaxon#NCBITaxon_10090	3 weeks	paternal T2D	pancreatic islet	EFO	EFO_0000856	ICR	P-GSE43238-1	ArrayExpress	P-GSE43238-2	ArrayExpress	P-GSE43238-3	ArrayExpress	GSM1059074 extract 1	Illumina Genome Analyzer	5-methylcytidine antibody	genomic	MeDIP-Seq	genomic DNA	GSM1059074	SRX213635	Illumina Genome Analyzer (Mus musculus)	sequencing assay	P-GSE43238-4	ArrayExpress	SRR643265_2.fastq.gz	SRR643265	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643265/SRR643265_2.fastq.gz	GSM1059074_Pancreatic_Islets_T_peaks.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43238/E-GEOD-43238.processed.1.zip	3 weeks	paternal T2D	pancreatic islet	EFO	EFO_0000856
GSM1059074 1	Immunoprecipitation using antibodies against 5mC followed by deep sequencing	Pancreatic Islets	Pancreatic Islets paternal T2D	Mus musculus	EFO	http://purl.org/obo/owl/NCBITaxon#NCBITaxon_10090	3 weeks	paternal T2D	pancreatic islet	EFO	EFO_0000856	ICR	P-GSE43238-1	ArrayExpress	P-GSE43238-2	ArrayExpress	P-GSE43238-3	ArrayExpress	GSM1059074 extract 1	Illumina Genome Analyzer	5-methylcytidine antibody	genomic	MeDIP-Seq	genomic DNA	GSM1059074	SRX213635	Illumina Genome Analyzer (Mus musculus)	sequencing assay	P-GSE43238-4	ArrayExpress	SRR643265_1.fastq.gz	SRR643265	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643265/SRR643265_1.fastq.gz	GSM1059074_Pancreatic_Islets_T_peaks.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43238/E-GEOD-43238.processed.1.zip	3 weeks	paternal T2D	pancreatic islet	EFO	EFO_0000856
GSM1059073 1	Immunoprecipitation using antibodies against 5mC followed by deep sequencing	Pancreatic Islets	Pancreatic Islets paternal control	Mus musculus	EFO	http://purl.org/obo/owl/NCBITaxon#NCBITaxon_10090	3 weeks	paternal control	pancreatic islet	EFO	EFO_0000856	ICR	P-GSE43238-1	ArrayExpress	P-GSE43238-2	ArrayExpress	P-GSE43238-3	ArrayExpress	GSM1059073 extract 1	Illumina Genome Analyzer	5-methylcytidine antibody	genomic	MeDIP-Seq	genomic DNA	GSM1059073	SRX213634	Illumina Genome Analyzer (Mus musculus)	sequencing assay	P-GSE43238-4	ArrayExpress	SRR643264_2.fastq.gz	SRR643264	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643264/SRR643264_2.fastq.gz	GSM1059073_Pancreatic_Islets_C_peaks.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43238/E-GEOD-43238.processed.1.zip	3 weeks	paternal control	pancreatic islet	EFO	EFO_0000856
GSM1059073 1	Immunoprecipitation using antibodies against 5mC followed by deep sequencing	Pancreatic Islets	Pancreatic Islets paternal control	Mus musculus	EFO	http://purl.org/obo/owl/NCBITaxon#NCBITaxon_10090	3 weeks	paternal control	pancreatic islet	EFO	EFO_0000856	ICR	P-GSE43238-1	ArrayExpress	P-GSE43238-2	ArrayExpress	P-GSE43238-3	ArrayExpress	GSM1059073 extract 1	Illumina Genome Analyzer	5-methylcytidine antibody	genomic	MeDIP-Seq	genomic DNA	GSM1059073	SRX213634	Illumina Genome Analyzer (Mus musculus)	sequencing assay	P-GSE43238-4	ArrayExpress	SRR643264_1.fastq.gz	SRR643264	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR643/SRR643264/SRR643264_1.fastq.gz	GSM1059073_Pancreatic_Islets_C_peaks.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43238/E-GEOD-43238.processed.1.zip	3 weeks	paternal control	pancreatic islet	EFO	EFO_0000856