Source Name Comment [Sample_description] Comment [Sample_source_name] Comment [Sample_title] Characteristics [cell line] Characteristics [organism] Term Source REF Term Accession Number Protocol REF Term Source REF Protocol REF Term Source REF Protocol REF Term Source REF Extract Name Material Type Protocol REF Term Source REF Labeled Extract Name Label Protocol REF Term Source REF Assay Name Array Design REF Term Source REF Technology Type Protocol REF Term Source REF Protocol REF Term Source REF Normalization Name Derived Array Data File Comment [Derived ArrayExpress FTP file] FactorValue [TREATMENT] Term Source REF Term Accession Number GSM1059057 1 Replicate 2 ES cells Sox17(+) 5 KH2 Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 P-GSE43233-2 ArrayExpress P-GSE43233-3 ArrayExpress P-GSE43233-4 ArrayExpress GSM1059057 extract 1 total RNA P-GSE43233-5 ArrayExpress GSM1059057 LE 1 Biotin P-GSE43233-6 ArrayExpress GSM1059057 A-MEXP-1174 ArrayExpress array assay P-GSE43233-1 ArrayExpress P-GSE43233-7 ArrayExpress GSM1059057_sample_table.txt norm GSM1059057_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43233/E-GEOD-43233.processed.1.zip Sox17-V5 expression GSM1059056 1 Replicate 1 ES cells Sox17(+) 4 KH2 Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 P-GSE43233-2 ArrayExpress P-GSE43233-3 ArrayExpress P-GSE43233-4 ArrayExpress GSM1059056 extract 1 total RNA P-GSE43233-5 ArrayExpress GSM1059056 LE 1 Biotin P-GSE43233-6 ArrayExpress GSM1059056 A-MEXP-1174 ArrayExpress array assay P-GSE43233-1 ArrayExpress P-GSE43233-7 ArrayExpress GSM1059056_sample_table.txt norm GSM1059056_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43233/E-GEOD-43233.processed.1.zip Sox17-V5 expression GSM1059055 1 Replicate 3 ES cells Sox17(+) 3 KH2 Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 P-GSE43233-2 ArrayExpress P-GSE43233-3 ArrayExpress P-GSE43233-4 ArrayExpress GSM1059055 extract 1 total RNA P-GSE43233-5 ArrayExpress GSM1059055 LE 1 Biotin P-GSE43233-6 ArrayExpress GSM1059055 A-MEXP-1174 ArrayExpress array assay P-GSE43233-1 ArrayExpress P-GSE43233-7 ArrayExpress GSM1059055_sample_table.txt norm GSM1059055_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43233/E-GEOD-43233.processed.1.zip Sox17-V5 expression GSM1059054 1 Replicate 2 ES cells Sox17(+) 2 KH2 Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 P-GSE43233-2 ArrayExpress P-GSE43233-3 ArrayExpress P-GSE43233-4 ArrayExpress GSM1059054 extract 1 total RNA P-GSE43233-5 ArrayExpress GSM1059054 LE 1 Biotin P-GSE43233-6 ArrayExpress GSM1059054 A-MEXP-1174 ArrayExpress array assay P-GSE43233-1 ArrayExpress P-GSE43233-7 ArrayExpress GSM1059054_sample_table.txt norm GSM1059054_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43233/E-GEOD-43233.processed.1.zip Sox17-V5 expression GSM1059053 1 Replicate 1 ES cells Sox17(+) 1 KH2 Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 P-GSE43233-2 ArrayExpress P-GSE43233-3 ArrayExpress P-GSE43233-4 ArrayExpress GSM1059053 extract 1 total RNA P-GSE43233-5 ArrayExpress GSM1059053 LE 1 Biotin P-GSE43233-6 ArrayExpress GSM1059053 A-MEXP-1174 ArrayExpress array assay P-GSE43233-1 ArrayExpress P-GSE43233-7 ArrayExpress GSM1059053_sample_table.txt norm GSM1059053_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43233/E-GEOD-43233.processed.1.zip Sox17-V5 expression GSM1059052 1 Replicate 2 ES cells Sox17(-) 5 KH2 Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 P-GSE43233-2 ArrayExpress P-GSE43233-3 ArrayExpress P-GSE43233-4 ArrayExpress GSM1059052 extract 1 total RNA P-GSE43233-5 ArrayExpress GSM1059052 LE 1 Biotin P-GSE43233-6 ArrayExpress GSM1059052 A-MEXP-1174 ArrayExpress array assay P-GSE43233-1 ArrayExpress P-GSE43233-7 ArrayExpress GSM1059052_sample_table.txt norm GSM1059052_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43233/E-GEOD-43233.processed.1.zip control EFO EFO_0001461 GSM1059051 1 Replicate 1 ES cells Sox17(-) 4 KH2 Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 P-GSE43233-2 ArrayExpress P-GSE43233-3 ArrayExpress P-GSE43233-4 ArrayExpress GSM1059051 extract 1 total RNA P-GSE43233-5 ArrayExpress GSM1059051 LE 1 Biotin P-GSE43233-6 ArrayExpress GSM1059051 A-MEXP-1174 ArrayExpress array assay P-GSE43233-1 ArrayExpress P-GSE43233-7 ArrayExpress GSM1059051_sample_table.txt norm GSM1059051_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43233/E-GEOD-43233.processed.1.zip control EFO EFO_0001461 GSM1059050 1 Replicate 3 ES cells Sox17(-) 3 KH2 Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 P-GSE43233-2 ArrayExpress P-GSE43233-3 ArrayExpress P-GSE43233-4 ArrayExpress GSM1059050 extract 1 total RNA P-GSE43233-5 ArrayExpress GSM1059050 LE 1 Biotin P-GSE43233-6 ArrayExpress GSM1059050 A-MEXP-1174 ArrayExpress array assay P-GSE43233-1 ArrayExpress P-GSE43233-7 ArrayExpress GSM1059050_sample_table.txt norm GSM1059050_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43233/E-GEOD-43233.processed.1.zip control EFO EFO_0001461 GSM1059049 1 Replicate 2 ES cells Sox17(-) 2 KH2 Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 P-GSE43233-2 ArrayExpress P-GSE43233-3 ArrayExpress P-GSE43233-4 ArrayExpress GSM1059049 extract 1 total RNA P-GSE43233-5 ArrayExpress GSM1059049 LE 1 Biotin P-GSE43233-6 ArrayExpress GSM1059049 A-MEXP-1174 ArrayExpress array assay P-GSE43233-1 ArrayExpress P-GSE43233-7 ArrayExpress GSM1059049_sample_table.txt norm GSM1059049_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43233/E-GEOD-43233.processed.1.zip control EFO EFO_0001461 GSM1059048 1 Replicate 1 ES cells Sox17(-) 1 KH2 Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 P-GSE43233-2 ArrayExpress P-GSE43233-3 ArrayExpress P-GSE43233-4 ArrayExpress GSM1059048 extract 1 total RNA P-GSE43233-5 ArrayExpress GSM1059048 LE 1 Biotin P-GSE43233-6 ArrayExpress GSM1059048 A-MEXP-1174 ArrayExpress array assay P-GSE43233-1 ArrayExpress P-GSE43233-7 ArrayExpress GSM1059048_sample_table.txt norm GSM1059048_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43233/E-GEOD-43233.processed.1.zip control EFO EFO_0001461